DY258536

Overview
NameDY258536
Unique NameDY258536
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length1086
Libraries
Library NameType
AbsDev1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Ccv1_Contig14945 contig Ccv1_Contig14945:219..1304. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of DY258536 vs. ExPASy Swiss-Prot
Match: WAKLA_ARATH (Wall-associated receptor kinase-like 1 OS=Arabidopsis thaliana GN=WAKL1 PE=1 SV=1)

HSP 1 Score: 94.3597 bits (233), Expect = 1.279e-18
Identity = 67/242 (27.69%), Postives = 117/242 (48.35%), Query Frame = 3
Query:   75 QFRKKIDTLSKVNHKNFVNLIGFCEEEEPFTRMMVFEYAPNGTLFEHIHIKESEH-LDWGMRLRIAMGMAYCLEHMHQ-LNPPIAHNYLNSSAVHLTEDYAAKLSDLSFWNEIAMAE----------MXXXXXXXXXXXXXXXXXNVYNFGVLLFEMVTGRLPY-LVDNGSLEDWAADYLSGVQPLQQFVDPTLSSFDEEQLEK---LGELIKSCVRADPEKRPTMRDIAAILREITGITPD 752
            +F  +I  LS++NH+N V L+G C E E    ++V+EY PNG LF+ +H +  ++ + W +RLRIA+ +A  L +MH   + PI H  + ++ + L E Y AK+SD      + + +                            +VY+FGV+L E++TG  P   V +      A  +L  ++  +      +   DE +LE+   + +L + C+    + RP M++++  L  I     D
Sbjct:  469 EFINEIVLLSQINHRNIVKLLGCCLETE--VPILVYEYIPNGDLFKRLHDESDDYTMTWEVRLRIAIEIAGALTYMHSAASFPIFHRDIKTTNILLDEKYRAKVSDFGTSRSVTLDQTHLTTLVAGTFGYMDPEYFLSSQYTHKSDVYSFGVVLVELITGEKPLSRVRSEEGRGLATHFLEAMKENRVIDIIDIRIKDESKLEQVMAVAKLARKCLNRKGKNRPNMKEVSNELERIRSSPED 708          
BLAST of DY258536 vs. ExPASy Swiss-Prot
Match: GSO2_ARATH (LRR receptor-like serine/threonine-protein kinase GSO2 OS=Arabidopsis thaliana GN=GSO2 PE=2 SV=2)

HSP 1 Score: 93.9745 bits (232), Expect = 1.671e-18
Identity = 61/246 (24.80%), Postives = 113/246 (45.93%), Query Frame = 3
Query:   78 FRKKIDTLSKVNHKNFVNLIGFCEEEEPFTRMMVFEYAPNGTLFEHIH----IKESEHLDWGMRLRIAMGMAYCLEHMH-QLNPPIAHNYLNSSAVHLTEDYAAKLSDLSF-------------WNEIAMAEMXXXXXXXXXXXXXXXXXNVYNFGVLLFEMVTGRLP---YLVDNGSLEDWAADYLS---GVQPLQQFVDPTLSSF---DEEQLEKLGELIKSCVRADPEKRPTMRDIAAILREI 734
            F +++ TL  + H++ V L+G+C  +     ++++EY  NG++++ +H     K+ E L W  RL+IA+G+A  +E++H    PPI H  + SS V L  +  A L D                 N +                      +VY+ G++L E+VTG++P      +   +  W    L    G +  ++ +D  L S    +EE   ++ E+   C ++ P++RP+ R  +  L  +
Sbjct:  990 FNREVKTLGTIRHRHLVKLMGYCSSKADGLNLLIYEYMANGSVWDWLHANENTKKKEVLGWETRLKIALGLAQGVEYLHYDCVPPIVHRDIKSSNVLLDSNIEAHLGDFGLAKILTGNYDTNTESNTMFAGSYGYIAPEYAYSLKATEKSDVYSMGIVLMEIVTGKMPTEAMFDEETDMVRWVETVLDTPPGSEAREKLIDSELKSLLPCEEEAAYQVLEIALQCTKSYPQERPSSRQASEYLLNV 1235          
BLAST of DY258536 vs. ExPASy Swiss-Prot
Match: GSO1_ARATH (LRR receptor-like serine/threonine-protein kinase GSO1 OS=Arabidopsis thaliana GN=GSO1 PE=2 SV=1)

HSP 1 Score: 93.2041 bits (230), Expect = 2.850e-18
Identity = 62/237 (26.16%), Postives = 110/237 (46.41%), Query Frame = 3
Query:   78 FRKKIDTLSKVNHKNFVNLIGFCEEEEPFTRMMVFEYAPNGTLFEHIH------IKESEHLDWGMRLRIAMGMAYCLEHM-HQLNPPIAHNYLNSSAVHLTEDYAAKLSDLSF-------------WNEIAMAEMXXXXXXXXXXXXXXXXXNVYNFGVLLFEMVTGRLPYLVDNGSLED---WAADYLS-GVQPLQQFVDPTLS---SFDEEQLEKLGELIKSCVRADPEKRPTMR 707
            F +++ TL ++ H++ V L+G+C  +     ++++EY  NG++++ +H       K+ + LDW  RLRIA+G+A  +E++ H   PPI H  + SS V L  +  A L D                 N                        +VY+ G++L E+VTG++P     G+  D   W   +L        + +DP L     F+E+   ++ E+   C +  P++RP+ R
Sbjct:  993 FSREVKTLGRIRHRHLVKLMGYCSSKSEGLNLLIYEYMKNGSIWDWLHEDKPVLEKKKKLLDWEARLRIAVGLAQGVEYLHHDCVPPIVHRDIKSSNVLLDSNMEAHLGDFGLAKVLTENCDTNTDSNTWFACSYGYIAPEYAYSLKATEKSDVYSMGIVLMEIVTGKMPTDSVFGAEMDMVRWVETHLEVAGSARDKLIDPKLKPLLPFEEDAACQVLEIALQCTKTSPQERPSSR 1229          
BLAST of DY258536 vs. ExPASy Swiss-Prot
Match: Y5659_ARATH (Probable inactive receptor kinase At5g16590 OS=Arabidopsis thaliana GN=At5g16590 PE=1 SV=1)

HSP 1 Score: 92.8189 bits (229), Expect = 3.722e-18
Identity = 64/238 (26.89%), Postives = 110/238 (46.22%), Query Frame = 3
Query:   69 EVQFRKKIDTLSKVNHKNFVNLIGFCEEEEPFTRMMVFEYAPNGTLFEHIHIKESEH---LDWGMRLRIAMGMAYCLEHMHQLNPPIAHNYLNSSAVHLTEDYAAKLSDLSFWNEIAMAEMXXXXXXXXXXXXXXXXX-----NVYNFGVLLFEMVTGRLP---YLVDNG-SLEDWAADYLSGVQPLQQFVDPTLSSFDEEQLEKLGELIK---SCVRADPEKRPTMRDIAAILREIT 737
            E +FR+K+  L  ++H N V LI +    +   +++VFEY   G+L   +H  +      L+W  R  IA+G A  + ++H  +   +H  + SS + L+E + AK+SD      I+                          +VY+FGVL+ E++TG+ P    L + G  L  W +       P   F DP L+ +  +  E +  L+    SC    P+ RPTM ++  ++ E++
Sbjct:  380 EKEFREKLQVLGSISHANLVTLIAYYFSRDE--KLVVFEYMSRGSLSALLHGNKGSGRSPLNWETRANIALGAARAISYLHSRDATTSHGNIKSSNILLSESFEAKVSDYCLAPMISPTSTPNRIDGYRAPEVTDARKISQKADVYSFGVLILELLTGKSPTHQQLHEEGVDLPRWVSSITEQQSPSDVF-DPELTRYQSDSNENMIRLLNIGISCTTQYPDSRPTMPEVTRLIEEVS 614          
BLAST of DY258536 vs. ExPASy Swiss-Prot
Match: WAKLQ_ARATH (Wall-associated receptor kinase-like 20 OS=Arabidopsis thaliana GN=WAKL20 PE=2 SV=1)

HSP 1 Score: 92.8189 bits (229), Expect = 3.722e-18
Identity = 68/249 (27.31%), Postives = 115/249 (46.18%), Query Frame = 3
Query:   75 QFRKKIDTLSKVNHKNFVNLIGFCEEEEPFTRMMVFEYAPNGTLFEHIHIKES---EHLDWGMRLRIAMGMAYCLEHMHQ-LNPPIAHNYLNSSAVHLTEDYAAKLSDLSFWNEIAMAE---------------MXXXXXXXXXXXXXXXXXNVYNFGVLLFEMVTGRLPYLVDNGSLEDWAADYLSGV---QPLQQFVDP----TLSSFDEEQLEKLGELIKSCVRADPEKRPTMRDIAAILREITGI 743
            Q   ++  L +VNH++ V L+G C + E    ++++E+ PNGTLFEH+H       + L W  RL+IA   A  L ++H    PPI H  + SS + L E   AK+SD      + + E               +                 +VY+FGV+L EMVT +          +     Y++ +   + L + +DP    T +  D + +++LG L  +C+    + RP+M+++A  +  I  I
Sbjct:  403 QILNEVRILCQVNHRSLVRLLGCCVDLE--LPLLIYEFIPNGTLFEHLHGSSDRTWKPLTWRRRLQIAYQTAEGLAYLHSAAQPPIYHRDVKSSNILLDEKLNAKVSDFGLSRLVDLTETANNESHIFTGAQGTLGYLDPEYYRNFQLTDKSDVYSFGVVLLEMVTSKKAIDFTREEEDVNLVMYINKMMDQERLTECIDPLLKKTANKIDMQTIQQLGNLASACLNERRQNRPSMKEVADEIEYIINI 649          
BLAST of DY258536 vs. ExPASy Swiss-Prot
Match: Y5181_ARATH (Probable LRR receptor-like serine/threonine-protein kinase At1g51810 OS=Arabidopsis thaliana GN=At1g51810 PE=2 SV=1)

HSP 1 Score: 92.4337 bits (228), Expect = 4.861e-18
Identity = 64/236 (27.12%), Postives = 113/236 (47.88%), Query Frame = 3
Query:   75 QFRKKIDTLSKVNHKNFVNLIGFCEEEEPFTRMMVFEYAPNGTLFEHIHIKE-SEHLDWGMRLRIAMGMAYCLEHMHQ-LNPPIAHNYLNSSAVHLTEDYAAKLSDL-----------SFWNEIAMAEMXXXXXXXXXXXXXXXXXNVYNFGVLLFEMVTGRLPYLVDNGSLEDWAADYLSGV---QPLQQFVDPT-LSSFDEEQLEKLGELIKSCVRADPEKRPTMRDIAAILRE 731
            QF+ +++ L +V+HKN V L+G+CEE +     +++EY  NG L EH+  K     L+WG RL+IA+  A  LE++H    P + H  + ++ + L E +  KL+D            +  + +    +                 +VY+FGV+L  M+T +   ++D    +   A+++ G+     ++   DP  L  ++   + K  EL  SC+      RPTM  +   L+E
Sbjct:  617 QFKAEVELLLRVHHKNLVGLVGYCEEGDKLA--LIYEYMANGDLDEHMSGKRGGSILNWGTRLKIALEAAQGLEYLHNGCKPLMVHRDVKTTNILLNEHFDTKLADFGLSRSFPIEGETHVSTVVAGTIGYLDPEYYRTNWLTEKSDVYSFGVVLLVMITNQ--PVIDQNREKRHIAEWVGGMLTKGDIKSITDPNLLGDYNSGSVWKAVELAMSCMNPSSMTRPTMSQVVFELKE 848          
BLAST of DY258536 vs. ExPASy Swiss-Prot
Match: Y1755_ARATH (Probable LRR receptor-like serine/threonine-protein kinase At1g07550 OS=Arabidopsis thaliana GN=At1g07550 PE=2 SV=1)

HSP 1 Score: 92.4337 bits (228), Expect = 4.861e-18
Identity = 62/234 (26.50%), Postives = 115/234 (49.15%), Query Frame = 3
Query:   75 QFRKKIDTLSKVNHKNFVNLIGFCEEEEPFTRMMVFEYAPNGTLFEHIHIKES-EHLDWGMRLRIAMGMAYCLEHMHQ-LNPPIAHNYLNSSAVHLTEDYAAKLSDLS------FWNE----IAMAEMXXXXXXXXXXXXXXXXXNVYNFGVLLFEMVTGR--LPYLVDNGSLEDWAADYLSGVQPLQQFVDPTL-SSFDEEQLEKLGELIKSCVRADPEKRPTMRDIAAILRE 731
            +F+ +++ L +V+H+  V+LIG+C+++      +++E    G L EH+  K     L W +RL+IA+  A  +E++H    P I H  + S+ + L+E++ AK++D          NE    +                      +VY+FGV+L E+++G+  +    +N ++ +W +  L     ++  VDP L   +D     K+ EL  SCV    ++RP M  +  +L E
Sbjct:  599 EFKTEVELLLRVHHEKLVSLIGYCDDDNGLA--LIYELMGKGNLKEHLSGKPGCSVLSWPIRLKIALESAIGIEYLHTGCKPKIVHRDVKSTNILLSEEFEAKIADFGLSRSFLIGNEAQPTVVAGTFGYLDPEYHKTSLLSMKSDVYSFGVVLLEIISGQDVIDLSRENCNIVEWTSFILEN-GDIESIVDPNLHQDYDTSSAWKVVELAMSCVNRTSKERPNMSQVVHVLNE 829          
BLAST of DY258536 vs. ExPASy Swiss-Prot
Match: WAKLE_ARATH (Wall-associated receptor kinase-like 5 OS=Arabidopsis thaliana GN=WAKL5 PE=2 SV=2)

HSP 1 Score: 92.4337 bits (228), Expect = 4.861e-18
Identity = 68/242 (28.10%), Postives = 109/242 (45.04%), Query Frame = 3
Query:   75 QFRKKIDTLSKVNHKNFVNLIGFCEEEEPFTRMMVFEYAPNGTLFEHIHIKESEH-LDWGMRLRIAMGMAYCLEHMHQLNP-PIAHNYLNSSAVHLTEDYAAKLSDLSFWNEIAMAE----------MXXXXXXXXXXXXXXXXXNVYNFGVLLFEMVTGRLPYLVDNGSLEDWAADYLSGVQPLQQFVDPTLSSFDEE----QLEKLGELIKSCVRADPEKRPTMRDIAAILREITGITPD 752
            +F  +I  LS++NH+N V LIG C E E    ++V+EY PNG +F+ +H +  ++ + W +RLRIA+ +A  L +MH     PI H  + ++ + L E Y AK+SD      + + +                            +VY+FGV+L E++TG  P            A +        + +D       EE    QL  + +L + C+     KRP MR+ +  L  I     D
Sbjct:  472 KFINEIILLSQINHRNIVKLIGCCLETE--VPILVYEYIPNGDMFKRLHDESDDYAMTWEVRLRIAIEIAGALTYMHSAASFPIYHRDIKTTNILLDEKYGAKVSDFGTSRSVTIDQTHLTTMVAGTFGYMDPEYFLSSQYTDKSDVYSFGVVLVELITGEKPLSRIRSEEGRGLATHFLEAMKENRVIDIIDIRIKEESKLDQLMAVAKLARKCLSRKGIKRPNMREASLELERIRSSPED 711          
BLAST of DY258536 vs. ExPASy Swiss-Prot
Match: Y5457_ARATH (Probable LRR receptor-like serine/threonine-protein kinase At5g45780 OS=Arabidopsis thaliana GN=At5g45780 PE=2 SV=1)

HSP 1 Score: 92.0485 bits (227), Expect = 6.349e-18
Identity = 68/239 (28.45%), Postives = 111/239 (46.44%), Query Frame = 3
Query:   69 EVQFRKKIDTLSKVNHKNFVNLIGFCEEEEPFTRMMVFEYAPNGTLFEHI--HIKESEHLDWGMRLRIAMGMAYCLEHMH-QLNPPIAHNYLNSSAVHLTEDYAAKLSDL----------SFWNEIAMAEMXXXXXXXXXXXXXXXXXNVYNFGVLLFEMVTGRLPYLVDNGSLEDWAADYLSGVQPLQ------QFVDPTL-SSFDEEQLEKLGELIKSCVRADPEKRPTMRDIAAIL 725
            EVQF+ +++ +    H+N + L GFC   E   RM+V+ Y PNG++ + +  +  E   LDW  R+ IA+G A  L ++H Q NP I H  + ++ + L E + A + D           S         +                 +V+ FGVL+ E++TG    ++D G+ +      LS V+ L+      + VD  L   FD+  LE++ EL   C +  P  RP M  +  +L
Sbjct:  338 EVQFQTEVEMIGLAVHRNLLRLFGFCMTPEE--RMLVYPYMPNGSVADRLRDNYGEKPSLDWNRRISIALGAARGLVYLHEQCNPKIIHRDVKAANILLDESFEAIVGDFGLAKLLDQRDSHVTTAVRGTIGHIAPEYLSTGQSSEKTDVFGFGVLILELITGH--KMIDQGNGQVRKGMILSWVRTLKAEKRFAEMVDRDLKGEFDDLVLEEVVELALLCTQPHPNLRPRMSQVLKVL 572          
BLAST of DY258536 vs. ExPASy Swiss-Prot
Match: Y4245_ARATH (Probable LRR receptor-like serine/threonine-protein kinase At4g20450 OS=Arabidopsis thaliana GN=At4g20450 PE=2 SV=1)

HSP 1 Score: 92.0485 bits (227), Expect = 6.349e-18
Identity = 65/235 (27.66%), Postives = 109/235 (46.38%), Query Frame = 3
Query:   75 QFRKKIDTLSKVNHKNFVNLIGFCEEEEPFTRMMVFEYAPNGTLFEHIHIKESEH-LDWGMRLRIAMGMAYCLEHMH-QLNPPIAHNYLNSSAVHLTEDYAAKLSDLSFWNEIAM-----------AEMXXXXXXXXXXXXXXXXXNVYNFGVLLFEMVTGR--LPYLVDNGSLEDWAADYLSGVQPLQQFVDPTLS-SFDEEQLEKLGELIKSCVRADPEKRPTMRDIAAILRE 731
            QF+ ++D L +V+H N V L+G+C+E +    ++++EY  NG L +H+  + S   L W  RLRIA   A  LE++H    PP+ H  + S  + L  ++ AKL D        +                               +V++FGV+L E++T +  +    +   + +W    L+    ++  VDP+++  +D   L K  EL  SCV      RP M  +A  L+E
Sbjct:  631 QFKAEVDLLLRVHHINLVTLVGYCDEGQHL--VLIYEYMSNGNLKQHLSGENSRSPLSWENRLRIAAETAQGLEYLHIGCKPPMIHRDIKSMNILLDNNFQAKLGDFGLSRSFPVGSETHVSTNVAGSPGYLDPEYYRTNWLTEKSDVFSFGVVLLEIITSQPVIDQTREKSHIGEWVGFKLTN-GDIKNIVDPSMNGDYDSSSLWKALELAMSCVSPSSSGRPNMSQVANELQE 862          
The following BLAST results are available for this feature:
BLAST of DY258536 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 202
Match NameE-valueIdentityDescription
WAKLA_ARATH1.279e-1827.69Wall-associated receptor kinase-like 1 OS=Arabidop... [more]
GSO2_ARATH1.671e-1824.80LRR receptor-like serine/threonine-protein kinase ... [more]
GSO1_ARATH2.850e-1826.16LRR receptor-like serine/threonine-protein kinase ... [more]
Y5659_ARATH3.722e-1826.89Probable inactive receptor kinase At5g16590 OS=Ara... [more]
WAKLQ_ARATH3.722e-1827.31Wall-associated receptor kinase-like 20 OS=Arabido... [more]
Y5181_ARATH4.861e-1827.12Probable LRR receptor-like serine/threonine-protei... [more]
Y1755_ARATH4.861e-1826.50Probable LRR receptor-like serine/threonine-protei... [more]
WAKLE_ARATH4.861e-1828.10Wall-associated receptor kinase-like 5 OS=Arabidop... [more]
Y5457_ARATH6.349e-1828.45Probable LRR receptor-like serine/threonine-protei... [more]
Y4245_ARATH6.349e-1827.66Probable LRR receptor-like serine/threonine-protei... [more]

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Properties
Property NameValue
Genbank descriptionKN0AAI2BB02FM1 AbsDev1 Citrus clementina cDNA 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DY258536 ID=DY258536; Name=DY258536; organism=Citrus clementina; type=EST; length=1086bp
CTAATGGAGTTGAAATAGCTGTGGCCTCTGTCTCAGTGGCATCTGCCAAG
GATTGGCCTAAGAACTTAGAAGTGCAGTTTAGGAAGAAGATTGACACGTT
ATCAAAAGTGAACCACAAAAATTTTGTCAATCTTATTGGATTTTGTGAAG
AAGAGGAGCCTTTCACCAGAATGATGGTGTTTGAATATGCTCCTAATGGA
ACACTCTTTGAGCATATACACATTAAAGAATCAGAGCATTTGGACTGGGG
AATGAGGTTGCGGATTGCAATGGGTATGGCTTACTGCCTAGAGCATATGC
ATCAGCTGAACCCACCCATAGCCCACAATTACTTGAACTCTTCAGCTGTC
CATCTGACTGAGGACTATGCAGCCAAATTATCAGACTTAAGCTTCTGGAA
TGAGATAGCCATGGCTGAAATGGCAGCAACTAGCAAAAAACTTTCAAGTG
CACCCTCAGCAAGCCTTGAAAGCAACGTGTACAACTTTGGAGTATTATTA
TTTGAAATGGTAACGGGTAGGCTCCCTTATTTGGTGGACAACGGCTCTCT
AGAAGACTGGGCAGCTGATTATTTGAGTGGAGTGCAACCCCTTCAACAAT
TTGTTGATCCAACTTTAAGCTCTTTTGATGAGGAGCAGCTAGAGAAACTT
GGTGAACTGATAAAATCTTGTGTCCGCGCCGACCCAGAAAAAAGACCGAC
AATGAGAGACATTGCCGCAATATTGAGAGAGATAACCGGAATAACACCAG
ATGGAGCAATCCCAAAACTTTCCCCTCTTTGGTGGGCAGAGATTGAGATT
TTATCTACAGAGGCCATCTAGATTATGAATTTTGGATTGCAAGTATGAAA
AGCTTCAAATTTACCATGTTTTCTAGTTTGGTTAAGCAAAAAAAAAAAAT
CATTGCCTTTTGGTTTCATTACTTTGTGTATAGGTTGATGGAATTGGCAA
AGTATATAAATAAAATCCAAAGATAGTTGGGAAATTCCGGGAATATTTTC
TTTTGTTTTTTGCTTTTCCTTTTAAAAAAAATTTGTGGGGGTGACGGGGG
TGGGAAAAATGCCTACGAAATAAACCCCAAAGGGGG
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