DY258536

Overview
NameDY258536
Unique NameDY258536
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length1086
Libraries
Library NameType
AbsDev1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Ccv1_Contig14945 contig Ccv1_Contig14945:219..1304. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of DY258536 vs. ExPASy Swiss-Prot
Match: WAKLO_ARATH (Wall-associated receptor kinase-like 14 OS=Arabidopsis thaliana GN=WAKL14 PE=2 SV=2)

HSP 1 Score: 90.8929 bits (224), Expect = 1.414e-17
Identity = 74/256 (28.91%), Postives = 118/256 (46.09%), Query Frame = 3
Query:   75 QFRKKIDTLSKVNHKNFVNLIGFC-EEEEPFTRMMVFEYAPNGTLFEHIHIKESEHLDWGMRLRIAMGMAYCLEHMH-QLNPPIAHNYLNSSAVHLTEDYAAKLSDLSFWNEIAMAEM-----------XXXXXXXXXXXXXXXXXNVYNFGVLLFEMVTG------RLPYLVDNGSLEDWAADYLSGVQPLQQFVDP----TLSSFDEEQLEKLGELIKSCVRADPEKRPTMRDIAAILREITGITPDGAIPKLS 773
            Q   +I  LS V+H N V L+G C E+ +P   ++V+EY PNGTL EH+       L W +RL +A   A  + ++H  +NPPI H  + S+ + L  D+ +K++D    + + M E                             +VY+FGV+L E++TG        P+   N  L   A D + G   + + +DP     L ++    +  + EL   C+    + RPTM ++A    E+  I   G IP +S
Sbjct:  388 QVMNEIKLLSSVSHPNLVRLLGCCIEQGDP---VLVYEYMPNGTLSEHLQRDRGSGLPWTLRLTVATQTAKAIAYLHSSMNPPIYHRDIKSTNILLDYDFNSKVADFGL-SRLGMTESSHISTAPQGTPGYLDPQYHQCFHLSDKSDVYSFGVVLAEIITGLKVVDFTRPHTEIN--LAALAVDKI-GSGCIDEIIDPILDLDLDAWTLSSIHTVAELAFRCLAFHSDMRPTMTEVA---DELEQIRLSGWIPSMS 633          
BLAST of DY258536 vs. ExPASy Swiss-Prot
Match: PEPR1_ARATH (Leucine-rich repeat receptor-like protein kinase PEPR1 OS=Arabidopsis thaliana GN=PEPR1 PE=1 SV=1)

HSP 1 Score: 90.8929 bits (224), Expect = 1.414e-17
Identity = 66/244 (27.05%), Postives = 110/244 (45.08%), Query Frame = 3
Query:   84 KKIDTLSKVNHKNFVNLIGFCEEEEPFTRMMVFEYAPNGTLFEHIH-IKESEH-LDWGMRLRIAMGMAYCLEHMH-QLNPPIAHNYLNSSAVHLTEDY---------AAKLSDLSFWNEIAMAEMXXXXXXXXXXXXXXXXXNVYNFGVLLFEMVTGRLPY---LVDNGSLEDWAADYLSG------------VQPLQQFVDPTLSSFDEEQLEKLGELIKSCVRADPEKRPTMRDIAAILREI 734
            ++IDT+ KV H+N + L GF   ++    +M++ Y P G+L++ +H +   E+ LDW  R  +A+G+A+ L ++H   +PPI H  +    + +  D          A  L D +                           +VY++GV+L E+VT +        ++  +  W    LS             V P+   VD  L S   EQ+ ++ EL  SC + DP  RPTMRD   +L ++
Sbjct:  871 REIDTIGKVRHRNLIKLEGFWLRKDD--GLMLYRYMPKGSLYDVLHGVSPKENVLDWSARYNVALGVAHGLAYLHYDCHPPIVHRDIKPENILMDSDLEPHIGDFGLARLLDDSTVSTATVTGTTGYIAPENAFKTVRGRESDVYSYGVVLLELVTRKRAVDKSFPESTDIVSWVRSALSSSNNNVEDMVTTIVDPI--LVDELLDSSLREQVMQVTELALSCTQQDPAMRPTMRDAVKLLEDV 1110          
BLAST of DY258536 vs. ExPASy Swiss-Prot
Match: APK2B_ARATH (Protein kinase 2B, chloroplastic OS=Arabidopsis thaliana GN=APK2B PE=1 SV=1)

HSP 1 Score: 90.8929 bits (224), Expect = 1.414e-17
Identity = 60/239 (25.10%), Postives = 110/239 (46.03%), Query Frame = 3
Query:   87 KIDTLSKVNHKNFVNLIGFCEEEEPFTRMMVFEYAPNGTLFEHIHIKESEHLDWGMRLRIAMGMAYCLEHMHQLNPPIAHNYLNSSAVHLTEDYAAKLSDLSFW-----------NEIAMAEMXXXXXXXXXXXXXXXXXNVYNFGVLLFEMVTGRLPYLVDNG------SLEDWAADYLSGVQPLQQFVDPTL-SSFDEEQLEKLGELIKSCVRADPEKRPTMRDIAAILREITGITP 749
            +++ L +++H N V L+G+C E E   R++V+E+ P G+L  H+  + ++ L W +R+++A+G A  L  +H     + +    ++ + L  ++ +KLSD               +   M                    +VY+FGV+L E+++GR    VD        SL DWA  YL   + L + +D  L   + ++       L   C+  D + RP M ++ A L ++    P
Sbjct:  137 EVNYLGQLSHPNLVKLVGYCVEGE--NRLLVYEFMPKGSLENHLFRRGAQPLTWAIRMKVAIGAAKGLTFLHDAKSQVIYRDFKAANILLDAEFNSKLSDFGLAKAGPTGDKTHVSTQVMGTHGYAAPEYVATGRLTAKSDVYSFGVVLLELLSGR--RAVDKSKVGMEQSLVDWATPYLGDKRKLFRIMDTRLGGQYPQKGAYTAASLALQCLNPDAKLRPKMSEVLAKLDQLESTKP 371          
BLAST of DY258536 vs. ExPASy Swiss-Prot
Match: Y1571_ARATH (Probable leucine-rich repeat receptor-like protein kinase At1g35710 OS=Arabidopsis thaliana GN=At1g35710 PE=2 SV=1)

HSP 1 Score: 90.5077 bits (223), Expect = 1.847e-17
Identity = 64/227 (28.19%), Postives = 112/227 (49.34%), Query Frame = 3
Query:   75 QFRKKIDTLSKVNHKNFVNLIGFCEEEEPFTRMMVFEYAPNGTLFEHI-HIKESEHLDWGMRLRIAMGMAYCLEHMHQLN-PPIAHNYLNSSAVHLTEDYAAKLSDL----------SFWNEIAMAEMXXXXXXXXXXXXXXXXXNVYNFGVLLFEMVTGRLPY-LVDNGSLEDWAADYLSGVQPLQQFVDPTLSSFDEEQLEKLGELIKSCVRADPEKRPTMRDIA 716
            +F  ++  L+++ H+N V L GFC         +++EY   G+L + + + +E++ L W  R+ +  G+A+ L +MH     PI H  ++S  + L  DY AK+SD           S W+ +A                     +VY+FGVL+ E++ G+ P  LV + S     A  L  +   ++ ++P     + E+L K+ E+   C++A+PE RPTM  I+
Sbjct:  896 EFLNEVKALTEIRHRNVVKLFGFCSHRRH--TFLIYEYMEKGSLNKLLANDEEAKRLTWTKRINVVKGVAHALSYMHHDRITPIVHRDISSGNILLDNDYTAKISDFGTAKLLKTDSSNWSAVA-GTYGYVAPEFAYTMKVTEKCDVYSFGVLILELIIGKHPGDLVSSLSSSPGEALSLRSISD-ERVLEPR--GQNREKLLKMVEMALLCLQANPESRPTMLSIS 1116          
BLAST of DY258536 vs. ExPASy Swiss-Prot
Match: WAKLJ_ARATH (Wall-associated receptor kinase-like 10 OS=Arabidopsis thaliana GN=WAKL10 PE=2 SV=1)

HSP 1 Score: 90.5077 bits (223), Expect = 1.847e-17
Identity = 63/243 (25.93%), Postives = 110/243 (45.27%), Query Frame = 3
Query:   75 QFRKKIDTLSKVNHKNFVNLIGFCEEEEPFTRMMVFEYAPNGTLFEHIHIKESEHL--DWGMRLRIAMGMAYCLEHMHQL-NPPIAHNYLNSSAVHLTEDYAAKLSDL----------SFWNEIAMAEMXXXXXXXXXXXXXXXXXNVYNFGVLLFEMVTGRLPYLVDNGSLEDWAADYLSGVQP---LQQFVDPTL-SSFDEEQLEKLGELIKSCVRADPEKRPTMRDIAAILREITGITPD 752
            +F  ++  LS++NH+N V L+G C E +    ++V+E+ PNG LFEH+H    ++    W +RLRIA+ +A  L ++H   + PI H  + S+ + L E + AK+SD           +    +    +                 +VY+FGV+L E++TG               A Y +       L   +D  +       Q+    ++ + C+     KRP+MR ++  L +I   + D
Sbjct:  473 EFINEVVILSQINHRNIVKLLGCCLETD--VPILVYEFIPNGNLFEHLHDDSDDYTMTTWEVRLRIAVDIAGALSYLHSAASSPIYHRDIKSTNIMLDEKHRAKVSDFGTSRTVTVDHTHLTTVVSGTVGYMDPEYFQSSQFTDKSDVYSFGVVLAELITGEKSVSFLRSQEYRTLATYFTLAMKENRLSDIIDARIRDGCKLNQVTAAAKIARKCLNMKGRKRPSMRQVSMELEKIRSYSED 713          
BLAST of DY258536 vs. ExPASy Swiss-Prot
Match: WAK5_ARATH (Wall-associated receptor kinase 5 OS=Arabidopsis thaliana GN=WAK5 PE=2 SV=1)

HSP 1 Score: 90.5077 bits (223), Expect = 1.847e-17
Identity = 61/236 (25.85%), Postives = 113/236 (47.88%), Query Frame = 3
Query:   75 QFRKKIDTLSKVNHKNFVNLIGFCEEEEPFTRMMVFEYAPNGTLFEHIH-IKESEHLDWGMRLRIAMGMAYCLEHMHQ-LNPPIAHNYLNSSAVHLTEDYAAKLSDLSFWNEIAMAE----------MXXXXXXXXXXXXXXXXXNVYNFGVLLFEMVTGRLPYLVDNGSLEDWAADYLSGVQP---LQQFVD-PTLSSFDEEQLEKLGELIKSCVRADPEKRPTMRDIAAILREI 734
            QF  ++  LS++NH+N V L+G C E E    ++V+E+  +GTLF+H+H       L W  RLRIA+ +A  L ++H   + PI H  + ++ + L E+  AK++D      I M +          +                 +VY+FGV+L E+++G      +          Y         L + +D   ++ +++ ++++   +   C R   E+RP+M+++AA L  +
Sbjct:  448 QFINEVLVLSQINHRNVVKLLGCCLETE--VPLLVYEFISSGTLFDHLHGSMFDSSLTWEHRLRIAIEVAGTLAYLHSYASIPIIHRDVKTANILLDENLTAKVADFGASRLIPMDQEQLTTMVQGTLGYLDPEYYNTGLLNEKSDVYSFGVVLMELLSGEKALCFERPQSSKHLVSYFVSAMKENRLHEIIDGQVMNEYNQREIQESARIAVECTRIMGEERPSMKEVAAELEAL 681          
BLAST of DY258536 vs. ExPASy Swiss-Prot
Match: ERL2_ARATH (LRR receptor-like serine/threonine-protein kinase ERL2 OS=Arabidopsis thaliana GN=ERL2 PE=2 SV=1)

HSP 1 Score: 90.5077 bits (223), Expect = 1.847e-17
Identity = 63/251 (25.10%), Postives = 119/251 (47.41%), Query Frame = 3
Query:   54 WPKNLEVQFRKKIDTLSKVNHKNFVNLIGFCEEEEPFTRMMVFEYAPNGTLFEHIHIKESE-HLDWGMRLRIAMGMAYCLEHM-HQLNPPIAHNYLNSSAVHLTEDYAAKLSDLSFWNEI----------AMAEMXXXXXXXXXXXXXXXXXNVYNFGVLLFEMVTGRLPYLVDNGSLEDWAADYLSGVQPLQQFVDPTLS--SFDEEQLEKLGELIKSCVRADPEKRPTMRDIAAILREITGITPDGAIP 764
            +P N   +F  +++T+  + H+N V+L G+     PF  ++ ++Y  NG+L++ +H    +  LDW  RL+IA+G A  L ++ H   P I H  + SS + L  ++ A+LSD      I           +  +                 ++Y+FG++L E++TG+    VDN +         +    + + VD  +S    D   ++K  +L   C + +P +RPTM++++ +L  +    P   +P
Sbjct:  685 YPSNFR-EFETELETIGSIRHRNIVSLHGYALS--PFGNLLFYDYMENGSLWDLLHGPGKKVKLDWETRLKIAVGAAQGLAYLHHDCTPRIIHRDIKSSNILLDGNFEARLSDFGIAKSIPATKTYASTYVLGTIGYIDPEYARTSRLNEKSDIYSFGIVLLELLTGK--KAVDNEANLHQMILSKADDNTVMEAVDAEVSVTCMDSGHIKKTFQLALLCTKRNPLERPTMQEVSRVLLSLVPSPPPKKLP 930          
BLAST of DY258536 vs. ExPASy Swiss-Prot
Match: Y5188_ARATH (Probable LRR receptor-like serine/threonine-protein kinase At1g51880 OS=Arabidopsis thaliana GN=At1g51880 PE=2 SV=1)

HSP 1 Score: 90.1225 bits (222), Expect = 2.413e-17
Identity = 62/239 (25.94%), Postives = 112/239 (46.86%), Query Frame = 3
Query:   75 QFRKKIDTLSKVNHKNFVNLIGFCEEEEPFTRMMVFEYAPNGTLFEHIHIKESEH-LDWGMRLRIAMGMAYCLEHMHQ-LNPPIAHNYLNSSAVHLTEDYAAKLSDL-----------SFWNEIAMAEMXXXXXXXXXXXXXXXXXNVYNFGVLLFEMVTGR--LPYLVDNGSLEDWAADYLSGVQPLQQFVDPTL-SSFDEEQLEKLGELIKSCVRADPEKRPTMRDIAAILREITGI 743
            +F+ +++ L +V+H+N V L+G+C++ +     +++EY  NG L E++  K   + L W  R++IA+  A  LE++H    PP+ H  + ++ + L E Y AKL+D            S  + +                      +VY+FGV+L E+VT +       +   + +W    L+    ++  +DP L   +D     K+ EL  +CV     +RPTM  +   L E   +
Sbjct:  605 EFKAEVELLLRVHHRNLVGLVGYCDDGDNLA--LIYEYMANGDLKENMSGKRGGNVLTWENRMQIAVEAAQGLEYLHNGCTPPMVHRDVKTTNILLNERYGAKLADFGLSRSFPVDGESHVSTVVAGTPGYLDPEYYRTNWLSEKSDVYSFGVVLLEIVTNQPVTDKTRERTHINEWVGSMLT-KGDIKSILDPKLMGDYDTNGAWKIVELALACVNPSSNRRPTMAHVVTELNECVAL 840          
BLAST of DY258536 vs. ExPASy Swiss-Prot
Match: Y3545_ARATH (Probable receptor-like protein kinase At3g55450 OS=Arabidopsis thaliana GN=At3g55450 PE=1 SV=1)

HSP 1 Score: 90.1225 bits (222), Expect = 2.413e-17
Identity = 64/237 (27.00%), Postives = 114/237 (48.10%), Query Frame = 3
Query:   87 KIDTLSKVNHKNFVNLIGFCEEEEPFTRMMVFEYAPNGTLFEHIHI---KESEHLDWGMRLRIAMGMAYCLEHMHQLNPPIAHNYLNSSAVHLTEDYAAKLSDL-----------SFWNEIAMAEMXXXXXXXXXXXXXXXXXNVYNFGVLLFEMVTGRLPYLVDNG------SLEDWAADYLSGVQPLQQFVDPTLSS-FDEEQLEKLGELIKSCVRADPEKRPTMRDIAAILREI 734
            +I+ L +++H N V LIG+C E+E   R++V+E+   G+L  H+     K+ + L W +R+++A+  A  L  +H     + +  + +S + L  D+ AKLSD            S+ +   M                    +VY+FGV+L E++ GR    +D+       +L DWA  YL+  + +   VD  L+S +  E   +L  +   C+  +P+ RPTM  +   L ++
Sbjct:  115 EINYLGQLSHPNLVKLIGYCLEDE--QRLLVYEFMHKGSLENHLFANGNKDFKPLSWILRIKVALDAAKGLAFLHSDPVKVIYRDIKASNILLDSDFNAKLSDFGLARDGPMGEQSYVSTRVMGTFGYAAPEYVSTGHLNARSDVYSFGVVLLELLCGR--QALDHNRPAKEQNLVDWARPYLTSRRKVLLIVDTRLNSQYKPEGAVRLASIAVQCLSFEPKSRPTMDQVVRALVQL 347          
BLAST of DY258536 vs. ExPASy Swiss-Prot
Match: Y1357_ARATH (Probable receptor-like protein kinase At1g30570 OS=Arabidopsis thaliana GN=At1g30570 PE=1 SV=1)

HSP 1 Score: 90.1225 bits (222), Expect = 2.413e-17
Identity = 65/230 (28.26%), Postives = 107/230 (46.52%), Query Frame = 3
Query:   75 QFRKKIDTLSKVNHKNFVNLIGFCEEEEPFTRMMVFEYAPNGTLFEHIHIKESEHLDWGMRLRIAMGMAYCLEHMHQ-LNPPIAHNYLNSSAVHLTEDYAAKLSDL-----------SFWNEIAMAEMXXXXXXXXXXXXXXXXXNVYNFGVLLFEMVTGRL---PYL-VDNGSLEDWAADYLSGVQPLQQFVDPTL-SSFDEEQLEKLGELIKSCVRADPEKRPTMRDI 713
            +F  +I  LS++ H++ V+LIGFC+E      ++V+EY  NGTL  H+       L W  RL   +G A  L ++H      I H  + ++ + L E++ AK+SD            +  +                        +VY+FGV+LFE V  R    P L  D  +L +WA  +    + L+  +D  L  ++  E LEK GE+ + C+  + + RP M ++
Sbjct:  560 EFETEIVMLSRLRHRHLVSLIGFCDEHNEM--ILVYEYMANGTLRSHLFGSNLPPLSWKQRLEACIGSARGLHYLHTGSERGIIHRDVKTTNILLDENFVAKMSDFGLSKAGPSMDHTHVSTAVKGSFGYLDPEYFRRQQLTEKSDVYSFGVVLFEAVCARAVINPTLPKDQINLAEWALSW-QKQRNLESIIDSNLRGNYSPESLEKYGEIAEKCLADEGKNRPMMGEV 786          
The following BLAST results are available for this feature:
BLAST of DY258536 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 202
Match NameE-valueIdentityDescription
WAKLO_ARATH1.414e-1728.91Wall-associated receptor kinase-like 14 OS=Arabido... [more]
PEPR1_ARATH1.414e-1727.05Leucine-rich repeat receptor-like protein kinase P... [more]
APK2B_ARATH1.414e-1725.10Protein kinase 2B, chloroplastic OS=Arabidopsis th... [more]
Y1571_ARATH1.847e-1728.19Probable leucine-rich repeat receptor-like protein... [more]
WAKLJ_ARATH1.847e-1725.93Wall-associated receptor kinase-like 10 OS=Arabido... [more]
WAK5_ARATH1.847e-1725.85Wall-associated receptor kinase 5 OS=Arabidopsis t... [more]
ERL2_ARATH1.847e-1725.10LRR receptor-like serine/threonine-protein kinase ... [more]
Y5188_ARATH2.413e-1725.94Probable LRR receptor-like serine/threonine-protei... [more]
Y3545_ARATH2.413e-1727.00Probable receptor-like protein kinase At3g55450 OS... [more]
Y1357_ARATH2.413e-1728.26Probable receptor-like protein kinase At1g30570 OS... [more]

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Properties
Property NameValue
Genbank descriptionKN0AAI2BB02FM1 AbsDev1 Citrus clementina cDNA 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DY258536 ID=DY258536; Name=DY258536; organism=Citrus clementina; type=EST; length=1086bp
CTAATGGAGTTGAAATAGCTGTGGCCTCTGTCTCAGTGGCATCTGCCAAG
GATTGGCCTAAGAACTTAGAAGTGCAGTTTAGGAAGAAGATTGACACGTT
ATCAAAAGTGAACCACAAAAATTTTGTCAATCTTATTGGATTTTGTGAAG
AAGAGGAGCCTTTCACCAGAATGATGGTGTTTGAATATGCTCCTAATGGA
ACACTCTTTGAGCATATACACATTAAAGAATCAGAGCATTTGGACTGGGG
AATGAGGTTGCGGATTGCAATGGGTATGGCTTACTGCCTAGAGCATATGC
ATCAGCTGAACCCACCCATAGCCCACAATTACTTGAACTCTTCAGCTGTC
CATCTGACTGAGGACTATGCAGCCAAATTATCAGACTTAAGCTTCTGGAA
TGAGATAGCCATGGCTGAAATGGCAGCAACTAGCAAAAAACTTTCAAGTG
CACCCTCAGCAAGCCTTGAAAGCAACGTGTACAACTTTGGAGTATTATTA
TTTGAAATGGTAACGGGTAGGCTCCCTTATTTGGTGGACAACGGCTCTCT
AGAAGACTGGGCAGCTGATTATTTGAGTGGAGTGCAACCCCTTCAACAAT
TTGTTGATCCAACTTTAAGCTCTTTTGATGAGGAGCAGCTAGAGAAACTT
GGTGAACTGATAAAATCTTGTGTCCGCGCCGACCCAGAAAAAAGACCGAC
AATGAGAGACATTGCCGCAATATTGAGAGAGATAACCGGAATAACACCAG
ATGGAGCAATCCCAAAACTTTCCCCTCTTTGGTGGGCAGAGATTGAGATT
TTATCTACAGAGGCCATCTAGATTATGAATTTTGGATTGCAAGTATGAAA
AGCTTCAAATTTACCATGTTTTCTAGTTTGGTTAAGCAAAAAAAAAAAAT
CATTGCCTTTTGGTTTCATTACTTTGTGTATAGGTTGATGGAATTGGCAA
AGTATATAAATAAAATCCAAAGATAGTTGGGAAATTCCGGGAATATTTTC
TTTTGTTTTTTGCTTTTCCTTTTAAAAAAAATTTGTGGGGGTGACGGGGG
TGGGAAAAATGCCTACGAAATAAACCCCAAAGGGGG
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