DY258536

Overview
NameDY258536
Unique NameDY258536
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length1086
Libraries
Library NameType
AbsDev1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Ccv1_Contig14945 contig Ccv1_Contig14945:219..1304. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of DY258536 vs. ExPASy Swiss-Prot
Match: WAK4_ARATH (Wall-associated receptor kinase 4 OS=Arabidopsis thaliana GN=WAK4 PE=2 SV=1)

HSP 1 Score: 90.1225 bits (222), Expect = 2.413e-17
Identity = 61/236 (25.85%), Postives = 112/236 (47.46%), Query Frame = 3
Query:   75 QFRKKIDTLSKVNHKNFVNLIGFCEEEEPFTRMMVFEYAPNGTLFEHIH-IKESEHLDWGMRLRIAMGMAYCLEHMH-QLNPPIAHNYLNSSAVHLTEDYAAKLSDLSFWNEIAM----------AEMXXXXXXXXXXXXXXXXXNVYNFGVLLFEMVTGRLPYLVDNGSLEDWAADYLSGV---QPLQQFVD-PTLSSFDEEQLEKLGELIKSCVRADPEKRPTMRDIAAILREI 734
            QF  ++  LS++NH+N V L+G C E E    ++V+E+  +GTLF+H+H       L W  RLR+A+ +A  L ++H   + PI H  + ++ + L E+  AK++D      I M            +                 +VY+FGV+L E+++G+     +          Y +       L + +D   ++  ++ +++K   +   C R   E+RP M+++AA L  +
Sbjct:  450 QFINEVLVLSQINHRNVVKLLGCCLETE--VPLLVYEFISSGTLFDHLHGSMFDSSLTWEHRLRMAVEIAGTLAYLHSSASIPIIHRDIKTANILLDENLTAKVADFGASRLIPMDKEDLATMVQGTLGYLDPEYYNTGLLNEKSDVYSFGVVLMELLSGQKALCFERPQTSKHIVSYFASATKENRLHEIIDGQVMNENNQREIQKAARIAVECTRLTGEERPGMKEVAAELEAL 683          
BLAST of DY258536 vs. ExPASy Swiss-Prot
Match: IRAK4_BOVIN (Interleukin-1 receptor-associated kinase 4 OS=Bos taurus GN=IRAK4 PE=2 SV=1)

HSP 1 Score: 90.1225 bits (222), Expect = 2.413e-17
Identity = 62/241 (25.73%), Postives = 115/241 (47.72%), Query Frame = 3
Query:   60 KNLEVQFRKKIDTLSKVNHKNFVNLIGFCEEEEPFTRMMVFEYAPNGTLFEHIHIKE-SEHLDWGMRLRIAMGMAYCLEHMHQLNPPIAHNYLNSSAVHLTEDYAAKLSDLSFWN---EIAMAEMXXXXXXXXXXXXXXXXX-------NVYNFGVLLFEMVTGRLPYLVDNGS---LEDWAADYLSGVQPLQQFVDPTLSSFDEEQLEKLGELIKSCVRADPEKRPTMRDIAAILREITG 740
            + L+ QF ++I  ++K  H+N V L+GF  + +     +V+ Y PNG+L + +   + +  L W MR +IA G A  L ++H+ +    H  + S+ + L ED+ AK+SD        + A   M                        ++Y+FGV+L E++TG LP + ++     L D   +     + ++ +VD  ++  D   +E +  +   C+     KRP ++ +  +L E+TG
Sbjct:  225 EELKQQFDQEIKVMAKCQHENLVELLGFSSDGDDLC--LVYVYMPNGSLLDRLSCLDGTPPLSWNMRCKIAQGAANGLSYLHENHH--IHRDIKSANILLDEDFTAKISDFGLARASEKFAQTVMTSRIVGTTAYMAPEALRGEITPKSDIYSFGVVLLEIITG-LPAVDEHREPQLLLDIKEEIEDEEKTIEDYVDRKMNDIDSTSIETMYSVASQCLHEKKNKRPDIKKVQQLLEEMTG 460          
BLAST of DY258536 vs. ExPASy Swiss-Prot
Match: WAK3_ARATH (Wall-associated receptor kinase 3 OS=Arabidopsis thaliana GN=WAK3 PE=2 SV=2)

HSP 1 Score: 89.7373 bits (221), Expect = 3.151e-17
Identity = 64/237 (27.00%), Postives = 114/237 (48.10%), Query Frame = 3
Query:   75 QFRKKIDTLSKVNHKNFVNLIGFCEEEEPFTRMMVFEYAPNGTLFEHIH--IKESEHLDWGMRLRIAMGMAYCLEHMH-QLNPPIAHNYLNSSAVHLTEDYAAKLSDLSFWNEIAM----------AEMXXXXXXXXXXXXXXXXXNVYNFGVLLFEMVTGRLPYLVDNGSLEDWAADYLSGV---QPLQQFVDPTLSSFDE-EQLEKLGELIKSCVRADPEKRPTMRDIAAILREI 734
            QF  ++  LS++NH+N V ++G C E E    ++V+E+  NGTLF+H+H  I +S  L W  RLRIA+ +A  L ++H   + PI H  + ++ + L E+  AK++D      I M            +                 +VY+FGV+L E+++G+     +          Y         L + +D  + + D  +++++   +   C R   E+RP M+++AA L  +
Sbjct:  455 QFIHEVLVLSQINHRNVVKILGCCLETE--VPLLVYEFITNGTLFDHLHGSIFDSS-LTWEHRLRIAIEVAGTLAYLHSSASIPIIHRDIKTANILLDENLTAKVADFGASKLIPMDKEQLTTMVQGTLGYLDPEYYTTGLLNEKSDVYSFGVVLMELLSGQKALCFERPQASKHLVSYFVSATEENRLHEIIDDQVLNEDNLKEIQEAARIAAECTRLMGEERPRMKEVAAKLEAL 688          
BLAST of DY258536 vs. ExPASy Swiss-Prot
Match: RCH1_ARATH (LRR receptor-like serine/threonine-protein kinase RCH1 OS=Arabidopsis thaliana GN=RCH1 PE=2 SV=1)

HSP 1 Score: 89.7373 bits (221), Expect = 3.151e-17
Identity = 64/236 (27.12%), Postives = 110/236 (46.61%), Query Frame = 3
Query:   78 FRKKIDTLSKVNHKNFVNLIGFCEEEEPFTRMMVFEYAPNGTLFEHIHIKESE-HLDWGMRLRIAMGMAYCLEHM-HQLNPPIAHNYLNSSAVHLTEDYAAKLSDLSF------------WNEIAMAEMXXXXXXXXXXXXXXXXXNVYNFGVLLFEMVTGRLPY---LVDNGSLEDWAADYLSGVQPLQQFVDPTLSSFDEEQLEKLGELIKSCVRADPEKRPTMRDIAAILREI 734
            F  ++ TL  + HKN V  +G C  +   TR+++++Y  NG+L   +H +     L W +R +I +G A  L ++ H   PPI H  + ++ + +  D+   + D                N IA                     +VY++GV++ E++TG+ P    + D   + DW    +  +Q + Q +     S  EE ++ LG  +  C+   PE RPTM+D+AA+L EI
Sbjct:  836 FSAEVKTLGSIRHKNIVRFLGCCWNKN--TRLLMYDYMSNGSLGSLLHERSGVCSLGWEVRYKIILGAAQGLAYLHHDCVPPIVHRDIKANNILIGPDFEPYIGDFGLAKLVDDGDFARSSNTIA-GSYGYIAPEYGYSMKITEKSDVYSYGVVVLEVLTGKQPIDPTIPDGLHIVDWVKK-IRDIQVIDQGLQARPESEVEEMMQTLGVAL-LCINPIPEDRPTMKDVAAMLSEI 1066          
BLAST of DY258536 vs. ExPASy Swiss-Prot
Match: FERON_ARATH (Receptor-like protein kinase FERONIA OS=Arabidopsis thaliana GN=FER PE=1 SV=1)

HSP 1 Score: 89.7373 bits (221), Expect = 3.151e-17
Identity = 67/230 (29.13%), Postives = 107/230 (46.52%), Query Frame = 3
Query:   75 QFRKKIDTLSKVNHKNFVNLIGFCEEEEPFTRMMVFEYAPNGTLFEHIHIKESEHLDWGMRLRIAMGMAYCLEHMHQ-LNPPIAHNYLNSSAVHLTEDYAAKLSDLSFW-----------NEIAMAEMXXXXXXXXXXXXXXXXXNVYNFGVLLFEMVTGR---LPYLV-DNGSLEDWAADYLSGVQPLQQFVDPTL-SSFDEEQLEKLGELIKSCVRADPEKRPTMRDI 713
            +F+ +I+ LSK+ H++ V+LIG+CEE      ++V++Y  +GT+ EH++  ++  L W  RL I +G A  L ++H      I H  + ++ + L E + AK+SD               + +                      +VY+FGV+LFE +  R    P L  +  SL +W A Y      L Q VDP L      E  +K  E    CV     +RP+M D+
Sbjct:  577 EFQTEIEMLSKLRHRHLVSLIGYCEEN--CEMILVYDYMAHGTMREHLYKTQNPSLPWKQRLEICIGAARGLHYLHTGAKHTIIHRDVKTTNILLDEKWVAKVSDFGLSKTGPTLDHTHVSTVVKGSFGYLDPEYFRRQQLTEKSDVYSFGVVLFEALCARPALNPTLAKEQVSLAEW-APYCYKKGMLDQIVDPYLKGKITPECFKKFAETAMKCVLDQGIERPSMGDV 803          
BLAST of DY258536 vs. ExPASy Swiss-Prot
Match: Y3288_ARATH (Probable inactive receptor kinase At3g02880 OS=Arabidopsis thaliana GN=At3g02880 PE=1 SV=1)

HSP 1 Score: 89.3521 bits (220), Expect = 4.115e-17
Identity = 63/238 (26.47%), Postives = 110/238 (46.22%), Query Frame = 3
Query:   69 EVQFRKKIDTLSKVNHKNFVNLIGFCEEEEPFTRMMVFEYAPNGTLFEHIHIKESEH---LDWGMRLRIAMGMAYCLEHMHQLNPPIAHNYLNSSAVHLTEDYAAKLSDLSFWNEIAMAEM-----XXXXXXXXXXXXXXXXXNVYNFGVLLFEMVTGRLP---YLVDNG-SLEDWAADYLSGVQPLQQFVDPTLSSFDEEQLEKLGELIK---SCVRADPEKRPTMRDIAAILREIT 737
            E +FR+++  L  ++H N V LI +    +   +++VFEY   G+L   +H  +      L+W  R  IA+G A  + ++H  +   +H  + SS + L++ Y AK+SD      I+                          +VY+FGVL+ E++TG+ P    L + G  L  W         P    +DP L+ +  E  E +  L+K   SC    P+ RP+M ++  ++ E++
Sbjct:  382 EKEFRERLHVLGSMSHANLVTLIAYYFSRDE--KLLVFEYMSKGSLSAILHGNKGNGRTPLNWETRAGIALGAARAISYLHSRDGTTSHGNIKSSNILLSDSYEAKVSDYGLAPIISSTSAPNRIDGYRAPEITDARKISQKADVYSFGVLILELLTGKSPTHQQLNEEGVDLPRWVQSVTEQQTP-SDVLDPELTRYQPEGNENIIRLLKIGMSCTAQFPDSRPSMAEVTRLIEEVS 616          
BLAST of DY258536 vs. ExPASy Swiss-Prot
Match: SERK1_ARATH (Somatic embryogenesis receptor kinase 1 OS=Arabidopsis thaliana GN=SERK1 PE=1 SV=2)

HSP 1 Score: 89.3521 bits (220), Expect = 4.115e-17
Identity = 67/268 (25.00%), Postives = 124/268 (46.27%), Query Frame = 3
Query:   69 EVQFRKKIDTLSKVNHKNFVNLIGFCEEEEPFTRMMVFEYAPNGTLFEHIHIKESEH--LDWGMRLRIAMGMAYCLEHMH-QLNPPIAHNYLNSSAVHLTEDYAAKLSDL----------SFWNEIAMAEMXXXXXXXXXXXXXXXXXNVYNFGVLLFEMVTGRLPYLV------DNGSLEDWAADYLSGVQPLQQFVDPTL-SSFDEEQLEKLGELIKSCVRADPEKRPTMRDIAAILREITGITPDGAIPKLSPLWWAEIEILSTE 812
            E+QF+ +++ +S   H+N + L GFC    P  R++V+ Y  NG++   +  +      LDW  R RIA+G A  L ++H   +P I H  + ++ + L E++ A + D           +         +                 +V+ +G++L E++TG+  + +      D+  L DW    L   + L+  VDP L ++++E +LE++ ++   C +  P +RP M ++  +L        DG   K     W ++EIL  E
Sbjct:  341 ELQFQTEVEMISMAVHRNLLRLRGFC--MTPTERLLVYPYMANGSVASCLRERPPSQPPLDWPTRKRIALGSARGLSYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDTHVTTAVRGTIGHIAPEYLSTGKSSEKTDVFGYGIMLLELITGQRAFDLARLANDDDVMLLDWVKGLLK-EKKLEMLVDPDLQTNYEERELEQVIQVALLCTQGSPMERPKMSEVVRMLE------GDGLAEKWDE--WQKVEILREE 597          
BLAST of DY258536 vs. ExPASy Swiss-Prot
Match: PSKR1_DAUCA (Phytosulfokine receptor 1 OS=Daucus carota GN=PSKR PE=1 SV=1)

HSP 1 Score: 89.3521 bits (220), Expect = 4.115e-17
Identity = 66/241 (27.39%), Postives = 115/241 (47.72%), Query Frame = 3
Query:   66 LEVQFRKKIDTLSKVNHKNFVNLIGFCEEEEPFTRMMVFEYAPNGTLFEHIHIKES--EHLDWGMRLRIAMGMAYCLEHMHQ-LNPPIAHNYLNSSAVHLTEDYAAKLSDLSFWNEI----------AMAEMXXXXXXXXXXXXXXXXXNVYNFGVLLFEMVTGRLPYLV----DNGSLEDWAADYLSGVQPLQQFVDPTLSSFDE-EQLEKLGELIKSCVRADPEKRPTMRDIAAILREI 734
            ++ +F+ +++TLS+  H N V+L+G+C  +    +++++ Y  NG+L   +H K      LDW  RLRIA G A  L ++HQ   P I H  + SS + L++ + A L+D      I           +  +                 +VY+FGV+L E++TGR P  V     +  L  W     +  +  + F DP +   D  E++  + E+   C+  +P+ RPT + + + L  I
Sbjct:  780 MDREFQAEVETLSRAQHPNLVHLLGYCNYKN--DKLLIYSYMDNGSLDYWLHEKVDGPPSLDWKTRLRIARGAAEGLAYLHQSCEPHILHRDIKSSNILLSDTFVAHLADFGLARLILPYDTHVTTDLVGTLGYIPPEYGQASVATYKGDVYSFGVVLLELLTGRRPMDVCKPRGSRDLISWVLQMKTEKRESEIF-DPFIYDKDHAEEMLLVLEIACRCLGENPKTRPTTQQLVSWLENI 1017          
BLAST of DY258536 vs. ExPASy Swiss-Prot
Match: ERL1_ARATH (LRR receptor-like serine/threonine-protein kinase ERL1 OS=Arabidopsis thaliana GN=ERL1 PE=2 SV=1)

HSP 1 Score: 89.3521 bits (220), Expect = 4.115e-17
Identity = 63/238 (26.47%), Postives = 115/238 (48.32%), Query Frame = 3
Query:   54 WPKNLEVQFRKKIDTLSKVNHKNFVNLIGFCEEEEPFTRMMVFEYAPNGTLFEHIHIK-ESEHLDWGMRLRIAMGMAYCLEHM-HQLNPPIAHNYLNSSAVHLTEDYAAKLSDLSFWNEI----------AMAEMXXXXXXXXXXXXXXXXXNVYNFGVLLFEMVTGRLPYLVDNGSLEDWAADYLSGVQPLQQFVDP--TLSSFDEEQLEKLGELIKSCVRADPEKRPTMRDIAAIL 725
            +P NL  +F  +++T+  + H+N V+L G+     P   ++ ++Y  NG+L++ +H   +   LDW  RL+IA+G A  L ++ H   P I H  + SS + L E++ A LSD      I           +  +                 ++Y+FG++L E++TG+    VDN +         +    + + VDP  T++  D   + K  +L   C + +P +RPTM +++ +L
Sbjct:  682 YPHNLR-EFETELETIGSIRHRNIVSLHGYALS--PTGNLLFYDYMENGSLWDLLHGSLKKVKLDWETRLKIAVGAAQGLAYLHHDCTPRIIHRDIKSSNILLDENFEAHLSDFGIAKSIPASKTHASTYVLGTIGYIDPEYARTSRINEKSDIYSFGIVLLELLTGK--KAVDNEANLHQLILSKADDNTVMEAVDPEVTVTCMDLGHIRKTFQLALLCTKRNPLERPTMLEVSRVL 914          
BLAST of DY258536 vs. ExPASy Swiss-Prot
Match: BIK1_ARATH (Serine/threonine-protein kinase BIK1 OS=Arabidopsis thaliana GN=BIK1 PE=1 SV=1)

HSP 1 Score: 88.9669 bits (219), Expect = 5.375e-17
Identity = 64/236 (27.12%), Postives = 115/236 (48.73%), Query Frame = 3
Query:   87 KIDTLSKVNHKNFVNLIGFCEEEEPFTRMMVFEYAPNGTLFEHIHIKES--EHLDWGMRLRIAMGMAYCLEHMHQLNPPIAHNYLNSSAVHLTEDYAAKLS-----------DLSFWNEIAMAEMXXXXXXXXXXXXXXXXXNVYNFGVLLFEMVTGR------LPYLVDNGSLEDWAADYLSGVQPLQQFVDPTL-SSFDEEQLEKLGELIKSCVRADPEKRPTMRDIAAILREI 734
            +I+ L +++H N V LIG+C E+E   R++V+E+   G+L  H+  + +  + L W +R+ +A+  A  L  +H     + +  + +S + L  DY AKLS           DLS+ +   M                    +VY+FGVLL E+++G+       P   +N  L DWA  YL+  + +   VD  L + +  E+  ++  +   C+  +P+ RPTM  +   L+++
Sbjct:  121 EINYLGQLSHPNLVKLIGYCLEDEH--RLLVYEFMQKGSLENHLFRRGAYFKPLPWFLRVNVALDAAKGLAFLHSDPVKVIYRDIKASNILLDADYNAKLSDFGLARDGPMGDLSYVSTRVMGTYGYAAPEYMSSGHLNARSDVYSFGVLLLEILSGKRALDHNRPAKEEN--LVDWARPYLTSKRKVLLIVDNRLDTQYLPEEAVRMASVAVQCLSFEPKSRPTMDQVVRALQQL 352          
The following BLAST results are available for this feature:
BLAST of DY258536 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 202
Match NameE-valueIdentityDescription
WAK4_ARATH2.413e-1725.85Wall-associated receptor kinase 4 OS=Arabidopsis t... [more]
IRAK4_BOVIN2.413e-1725.73Interleukin-1 receptor-associated kinase 4 OS=Bos ... [more]
WAK3_ARATH3.151e-1727.00Wall-associated receptor kinase 3 OS=Arabidopsis t... [more]
RCH1_ARATH3.151e-1727.12LRR receptor-like serine/threonine-protein kinase ... [more]
FERON_ARATH3.151e-1729.13Receptor-like protein kinase FERONIA OS=Arabidopsi... [more]
Y3288_ARATH4.115e-1726.47Probable inactive receptor kinase At3g02880 OS=Ara... [more]
SERK1_ARATH4.115e-1725.00Somatic embryogenesis receptor kinase 1 OS=Arabido... [more]
PSKR1_DAUCA4.115e-1727.39Phytosulfokine receptor 1 OS=Daucus carota GN=PSKR... [more]
ERL1_ARATH4.115e-1726.47LRR receptor-like serine/threonine-protein kinase ... [more]
BIK1_ARATH5.375e-1727.12Serine/threonine-protein kinase BIK1 OS=Arabidopsi... [more]

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Properties
Property NameValue
Genbank descriptionKN0AAI2BB02FM1 AbsDev1 Citrus clementina cDNA 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DY258536 ID=DY258536; Name=DY258536; organism=Citrus clementina; type=EST; length=1086bp
CTAATGGAGTTGAAATAGCTGTGGCCTCTGTCTCAGTGGCATCTGCCAAG
GATTGGCCTAAGAACTTAGAAGTGCAGTTTAGGAAGAAGATTGACACGTT
ATCAAAAGTGAACCACAAAAATTTTGTCAATCTTATTGGATTTTGTGAAG
AAGAGGAGCCTTTCACCAGAATGATGGTGTTTGAATATGCTCCTAATGGA
ACACTCTTTGAGCATATACACATTAAAGAATCAGAGCATTTGGACTGGGG
AATGAGGTTGCGGATTGCAATGGGTATGGCTTACTGCCTAGAGCATATGC
ATCAGCTGAACCCACCCATAGCCCACAATTACTTGAACTCTTCAGCTGTC
CATCTGACTGAGGACTATGCAGCCAAATTATCAGACTTAAGCTTCTGGAA
TGAGATAGCCATGGCTGAAATGGCAGCAACTAGCAAAAAACTTTCAAGTG
CACCCTCAGCAAGCCTTGAAAGCAACGTGTACAACTTTGGAGTATTATTA
TTTGAAATGGTAACGGGTAGGCTCCCTTATTTGGTGGACAACGGCTCTCT
AGAAGACTGGGCAGCTGATTATTTGAGTGGAGTGCAACCCCTTCAACAAT
TTGTTGATCCAACTTTAAGCTCTTTTGATGAGGAGCAGCTAGAGAAACTT
GGTGAACTGATAAAATCTTGTGTCCGCGCCGACCCAGAAAAAAGACCGAC
AATGAGAGACATTGCCGCAATATTGAGAGAGATAACCGGAATAACACCAG
ATGGAGCAATCCCAAAACTTTCCCCTCTTTGGTGGGCAGAGATTGAGATT
TTATCTACAGAGGCCATCTAGATTATGAATTTTGGATTGCAAGTATGAAA
AGCTTCAAATTTACCATGTTTTCTAGTTTGGTTAAGCAAAAAAAAAAAAT
CATTGCCTTTTGGTTTCATTACTTTGTGTATAGGTTGATGGAATTGGCAA
AGTATATAAATAAAATCCAAAGATAGTTGGGAAATTCCGGGAATATTTTC
TTTTGTTTTTTGCTTTTCCTTTTAAAAAAAATTTGTGGGGGTGACGGGGG
TGGGAAAAATGCCTACGAAATAAACCCCAAAGGGGG
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