DY258536

Overview
NameDY258536
Unique NameDY258536
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length1086
Libraries
Library NameType
AbsDev1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of DY258536 vs. ExPASy Swiss-Prot
Match: Y1570_ARATH (Probable LRR receptor-like serine/threonine-protein kinase At1g05700 OS=Arabidopsis thaliana GN=At1g05700 PE=2 SV=1)

HSP 1 Score: 88.5817 bits (218), Expect = 7.019e-17
Identity = 65/235 (27.66%), Postives = 103/235 (43.83%), Query Frame = 3
Query:   75 QFRKKIDTLSKVNHKNFVNLIGFCEEEEPFTRMMVFEYAPNGTLFEHIHIKESEHLDWGMRLRIAMGMAYCLEHMH-QLNPPIAHNYLNSSAVHLTEDYAAKLSDL----SFWNE-------IAMAEMXXXXXXXXXXXXXXXXXNVYNFGVLLFEMVTGRLPYLVDNGS---LEDWAADYLSGVQPLQQFVDPTLS-SFDEEQLEKLGELIKSCVRADPEKRPTMRDIAAILRE 731
            +FR +++ L +V+H N   LIG+  E +     +++E+  NG + +H+  K    L W  RL+IA+  A  LE++H    PPI H  + +S + L E   AKL+D     SF  E       +                      ++Y+FGV+L EM+TG+            + DW    L     +   +D  ++  FD   + K+ EL  S V  +   RP M  I   L E
Sbjct:  609 EFRSEVEVLVRVHHVNLTALIGYFHEGDQMG--LIYEFMANGNMADHLAGKYQHTLSWRQRLQIALDAAQGLEYLHCGCKPPIVHRDVKTSNILLNEKNRAKLADFGLSRSFHTESRSHVSTLVAGTPGYLDPLCFETNGLNEKSDIYSFGVVLLEMITGKTVIKESQTKRVHVSDWVISILRSTNDVNNVIDSKMAKDFDVNSVWKVVELALSSVSQNVSDRPNMPHIVRGLNE 841          
BLAST of DY258536 vs. ExPASy Swiss-Prot
Match: ANX1_ARATH (Receptor-like protein kinase ANXUR1 OS=Arabidopsis thaliana GN=ANX1 PE=2 SV=1)

HSP 1 Score: 88.1965 bits (217), Expect = 9.168e-17
Identity = 65/232 (28.02%), Postives = 108/232 (46.55%), Query Frame = 3
Query:   75 QFRKKIDTLSKVNHKNFVNLIGFCEEEEPFTRMMVFEYAPNGTLFEHIHIKESEHLDWGMRLRIAMGMAYCLEHMHQ-LNPPIAHNYLNSSAVHLTEDYAAKLSDLSF-----------WNEIAMAEMXXXXXXXXXXXXXXXXXNVYNFGVLLFEMVTGR------LPYLVDNGSLEDWAADYLSGVQPLQQFVDPTL-SSFDEEQLEKLGELIKSCVRADPEKRPTMRDI 713
            +F  +I+ LS++ HK+ V+LIG+C+E       +V++Y   GTL EH++  +   L W  RL IA+G A  L ++H      I H  + ++ + + E++ AK+SD                 +                      +VY+FGV+LFE++  R      LP   +  SL DWA +       L+  +DP L    + E L+K  +  + C+     +RPTM D+
Sbjct:  557 EFETEIELLSRLRHKHLVSLIGYCDEGGEMC--LVYDYMAFGTLREHLYNTKKPQLTWKRRLEIAIGAARGLHYLHTGAKYTIIHRDVKTTNILVDENWVAKVSDFGLSKTGPNMNGGHVTTVVKGSFGYLDPEYFRRQQLTEKSDVYSFGVVLFEILCARPALNPSLP--KEQVSLGDWAMN-CKRKGNLEDIIDPNLKGKINAECLKKFADTAEKCLNDSGLERPTMGDV 783          
BLAST of DY258536 vs. ExPASy Swiss-Prot
Match: ANX2_ARATH (Receptor-like protein kinase ANXUR2 OS=Arabidopsis thaliana GN=ANX2 PE=2 SV=1)

HSP 1 Score: 87.8113 bits (216), Expect = 1.197e-16
Identity = 65/231 (28.14%), Postives = 107/231 (46.32%), Query Frame = 3
Query:   75 QFRKKIDTLSKVNHKNFVNLIGFCEEEEPFTRMMVFEYAPNGTLFEHIHIKESEHLDWGMRLRIAMGMAYCLEHMHQ-LNPPIAHNYLNSSAVHLTEDYAAKLSDLSF-----------WNEIAMAEMXXXXXXXXXXXXXXXXXNVYNFGVLLFEMVTGRLPYL-----VDNGSLEDWAADYLSGVQPLQQFVDPTL-SSFDEEQLEKLGELIKSCVRADPEKRPTMRDI 713
            +F  +I+ LS++ HK+ V+LIG+C+E       ++++Y   GTL EH++  +   L W  RL IA+G A  L ++H      I H  + ++ + L E++ AK+SD                 +                      +VY+FGV+LFE++  R P L      +  SL DWA +       L+  +DP L    + E L+K  +  + C+      RPTM D+
Sbjct:  561 EFETEIELLSRLRHKHLVSLIGYCDEGGEMC--LIYDYMSLGTLREHLYNTKRPQLTWKRRLEIAIGAARGLHYLHTGAKYTIIHRDVKTTNILLDENWVAKVSDFGLSKTGPNMNGGHVTTVVKGSFGYLDPEYFRRQQLTEKSDVYSFGVVLFEVLCAR-PALNPSLSKEQVSLGDWAMN-CKRKGTLEDIIDPNLKGKINPECLKKFADTAEKCLSDSGLDRPTMGDV 787          
BLAST of DY258536 vs. ExPASy Swiss-Prot
Match: WAKLD_ARATH (Wall-associated receptor kinase-like 4 OS=Arabidopsis thaliana GN=WAKL4 PE=2 SV=2)

HSP 1 Score: 87.4261 bits (215), Expect = 1.564e-16
Identity = 62/237 (26.16%), Postives = 117/237 (49.37%), Query Frame = 3
Query:   75 QFRKKIDTLSKVNHKNFVNLIGFCEEEEPFTRMMVFEYAPNGTLFEHIHIKESEH-LDWGMRLRIAMGMAYCLEHMHQ-LNPPIAHNYLNSSAVHLTEDYAAKLSDLSFWNEIAMAE----------MXXXXXXXXXXXXXXXXXNVYNFGVLLFEMVTGRLP-YLVDNGSLEDWAADYLSGVQPLQQFVDPTLSSFDEE----QLEKLGELIKSCVRADPEKRPTMRDIAAILREI 734
            +F  ++  L+++NH+N V L+G C E E    ++V+E+ PNG L + +  +  ++ + W +RL IA+ +A  L ++H   + PI H  + ++ + L E Y  K+SD      + + +                            +VY+FGV+L E++TG+ P   V +     +AA +++ V+   +F+D       +E    Q+  + +L K C+    +KRP MR+++  L  I
Sbjct:  464 EFINEVVVLAQINHRNIVKLLGCCLETE--VPVLVYEFVPNGDLCKRLRDECDDYIMTWEVRLHIAIEIAGALSYLHSAASFPIYHRDIKTTNILLDEKYQVKVSDFGTSRSVTIDQTHLTTQVAGTFGYVDPEYFQSSKFTDKSDVYSFGVVLVELITGKNPSSRVQSEENRGFAAHFVAAVKE-NRFLDIVDERIKDECNLDQVMAVAKLAKRCLNRKGKKRPNMREVSVELERI 697          
BLAST of DY258536 vs. ExPASy Swiss-Prot
Match: Y5597_ARATH (Probable receptor-like protein kinase At5g59700 OS=Arabidopsis thaliana GN=At5g59700 PE=2 SV=1)

HSP 1 Score: 87.0409 bits (214), Expect = 2.042e-16
Identity = 64/230 (27.83%), Postives = 109/230 (47.39%), Query Frame = 3
Query:   75 QFRKKIDTLSKVNHKNFVNLIGFCEEEEPFTRMMVFEYAPNGTLFEHIHIKESEHLDWGMRLRIAMGMAYCLEHMHQLN-PPIAHNYLNSSAVHLTEDYAAKLSDL-----------SFWNEIAMAEMXXXXXXXXXXXXXXXXXNVYNFGVLLFEMVTGRL---PYLV-DNGSLEDWAADYLSGVQPLQQFVDPTL-SSFDEEQLEKLGELIKSCVRADPEKRPTMRDI 713
            +FR +I+ LS+  H++ V+LIG+C+E      ++V+EY  NGTL  H++      L W  RL I +G A  L ++H  +  P+ H  + S+ + L E+  AK++D            +  +                        +VY+FGV++FE++  R    P L  +  +L +WA  +    Q L+  +DP+L      + L K GE  + C+      RP+M D+
Sbjct:  522 EFRTEIEMLSQFRHRHLVSLIGYCDENNEM--ILVYEYMENGTLKSHLYGSGLLSLSWKQRLEICIGSARGLHYLHTGDAKPVIHRDVKSANILLDENLMAKVADFGLSKTGPEIDQTHVSTAVKGSFGYLDPEYFRRQQLTEKSDVYSFGVVMFEVLCARPVIDPTLTREMVNLAEWAMKWQKKGQ-LEHIIDPSLRGKIRPDSLRKFGETGEKCLADYGVDRPSMGDV 748          
BLAST of DY258536 vs. ExPASy Swiss-Prot
Match: Y5487_ARATH (Probable LRR receptor-like serine/threonine-protein kinase At5g48740 OS=Arabidopsis thaliana GN=At5g48740 PE=2 SV=1)

HSP 1 Score: 87.0409 bits (214), Expect = 2.042e-16
Identity = 66/237 (27.85%), Postives = 112/237 (47.26%), Query Frame = 3
Query:   78 FRKKIDTLSKVNHKNFVNLIGFCEEEEPFTRMMVFEYAPNGTLFEHIHIKESEH--LDWGMRLRIAMGMAYCLEHMHQLNPP-IAHNYLNSSAVHLTEDYAAKLSDLSFWNEIAMAEMXXXXXXXXXXXXXXXXX-----------NVYNFGVLLFEMVTGRLPY----LVDNGSLEDWAADYLSGVQPLQQFVDPTL-SSFDEEQLEKLGELIKSCVRADPEKRPTMRDIAAILRE 731
            F  ++  LS++ H+N V+  GFC E  P  +++V+EY   G+L +H++   S+   L+W  RL++A+  A  L+++H  + P I H  + SS + L +D  AK+SD     +   A+                             +VY+FGV+L E++ GR P       D+ +L  WA   L       + VD  L  +FD   ++K   +   CV  D   RP++ ++   L+E
Sbjct:  647 FINEVHLLSQIRHQNLVSFEGFCYE--PKRQILVYEYLSGGSLADHLYGPRSKRHSLNWVSRLKVAVDAAKGLDYLHNGSEPRIIHRDVKSSNILLDKDMNAKVSDFGLSKQFTKADASHITTVVKGTAGYLDPEYYSTLQLTEKSDVYSFGVVLLELICGREPLSHSGSPDSFNLVLWARPNLQA--GAFEIVDDILKETFDPASMKKAASIAIRCVGRDASGRPSIAEVLTKLKE 879          
BLAST of DY258536 vs. ExPASy Swiss-Prot
Match: PSKR2_ARATH (Phytosulfokine receptor 2 OS=Arabidopsis thaliana GN=PSKR2 PE=2 SV=1)

HSP 1 Score: 87.0409 bits (214), Expect = 2.042e-16
Identity = 61/243 (25.10%), Postives = 118/243 (48.56%), Query Frame = 3
Query:   66 LEVQFRKKIDTLSKVNHKNFVNLIGFCEEEEPFTRMMVFEYAPNGTL--FEHIHIKESEHLDWGMRLRIAMGMAYCLEHMHQL-NPPIAHNYLNSSAVHLTEDYAAKLSDLSFWNEI----------AMAEMXXXXXXXXXXXXXXXXXNVYNFGVLLFEMVTGRLPYLVDNGSLEDWAADYLSGVQPLQ------QFVDPTL-SSFDEEQLEKLGELIKSCVRADPEKRPTMRDIAAILREI 734
            +E +F+ +++ LS+  HKN V+L G+C+      R++++ +  NG+L  + H  +  +  L W +RL+IA G A  L ++H++  P + H  + SS + L E + A L+D      +           +  +                 +VY+FGV+L E+VTGR P  V  G       D +S V  ++      + +D T+  + +E  + ++ E+   C+  +P +RP + ++   L ++
Sbjct:  791 MEREFQAEVEALSRAEHKNLVSLQGYCKHGN--DRLLIYSFMENGSLDYWLHERVDGNMTLIWDVRLKIAQGAARGLAYLHKVCEPNVIHRDVKSSNILLDEKFEAHLADFGLARLLRPYDTHVTTDLVGTLGYIPPEYSQSLIATCRGDVYSFGVVLLELVTGRRPVEVCKGKS---CRDLVSRVFQMKAEKREAELIDTTIRENVNERTVLEMLEIACKCIDHEPRRRPLIEEVVTWLEDL 1028          
BLAST of DY258536 vs. ExPASy Swiss-Prot
Match: BRL1_ARATH (Serine/threonine-protein kinase BRI1-like 1 OS=Arabidopsis thaliana GN=BRL1 PE=1 SV=1)

HSP 1 Score: 87.0409 bits (214), Expect = 2.042e-16
Identity = 69/249 (27.71%), Postives = 119/249 (47.79%), Query Frame = 3
Query:   75 QFRKKIDTLSKVNHKNFVNLIGFCEEEEPFTRMMVFEYAPNGTLFEHIHIKESE----HLDWGMRLRIAMGMAYCLEHM-HQLNPPIAHNYLNSSAVHLTEDYAAKLSDLSFWNEIAMAEM-----------XXXXXXXXXXXXXXXXXNVYNFGVLLFEMVTGRLPY----LVDNGSLEDWAADYLSGVQPLQQFVDPTL---SSFDEEQLEKLGELIKSCVRADPEKRPTMRDIAAILREITGITPD 752
            +F  +++T+ K+ H+N V L+G+C+  E   R++V+EY   G+L   +H K S+    +L+W  R +IA+G A  L  + H   P I H  + SS V L ED+ A++SD      ++  +                             +VY++GV+L E+++G+ P       ++ +L  WA   L   +   + +DP L    S D E    L ++   C+   P KRPTM  + A+ +E+   T +
Sbjct:  899 EFMAEMETIGKIKHRNLVPLLGYCKVGE--ERLLVYEYMKWGSLETVLHEKSSKKGGIYLNWAARKKIAIGAARGLAFLHHSCIPHIIHRDMKSSNVLLDEDFEARVSDFGMARLVSALDTHLSVSTLAGTPGYVPPEYYQSFRCTAKGDVYSYGVILLELLSGKKPIDPGEFGEDNNLVGWAKQ-LYREKRGAEILDPELVTDKSGDVELFHYL-KIASQCLDDRPFKRPTMIQLMAMFKEMKADTEE 1143          
BLAST of DY258536 vs. ExPASy Swiss-Prot
Match: APK1B_ARATH (Protein kinase APK1B, chloroplastic OS=Arabidopsis thaliana GN=APK1B PE=2 SV=2)

HSP 1 Score: 86.6557 bits (213), Expect = 2.667e-16
Identity = 64/243 (26.34%), Postives = 112/243 (46.09%), Query Frame = 3
Query:   87 KIDTLSKVNHKNFVNLIGFCEEEEPFTRMMVFEYAPNGTLFEHIHIKES--EHLDWGMRLRIAMGMAYCLEHMHQLNPPIAHNYLNSSAVHLTEDYAAKLSDL-----------SFWNEIAMAEMXXXXXXXXXXXXXXXXXNVYNFGVLLFEMVTGRLPYLVDNG------SLEDWAADYLSGVQPLQQFVDPTL-SSFDEEQLEKLGELIKSCVRADPEKRPTMRDIAAILREITGITPDG 755
            +++ L + +H N V LIG+C E+E   R++V+E+ P G+L  H+  + S  + L W +RL++A+G A  L  +H     + +    +S + L  +Y AKLSD            S  +   M                    +VY++GV+L E+++GR    VD         L +WA   L+  + L + +D  L   +  E+  K+  L   C+  + + RP M ++ + L  I  +   G
Sbjct:  123 EVNYLGQFSHPNLVKLIGYCLEDEH--RLLVYEFMPRGSLENHLFRRGSYFQPLSWTLRLKVALGAAKGLAFLHNAETSVIYRDFKTSNILLDSEYNAKLSDFGLAKDGPTGDKSHVSTRIMGTYGYAAPEYLATGHLTTKSDVYSYGVVLLEVLSGR--RAVDKNRPPGEQKLVEWARPLLANKRKLFRVIDNRLQDQYSMEEACKVATLALRCLTFEIKLRPNMNEVVSHLEHIQTLNEAG 361          
BLAST of DY258536 vs. ExPASy Swiss-Prot
Match: Y4265_ARATH (Probable LRR receptor-like serine/threonine-protein kinase At4g26540 OS=Arabidopsis thaliana GN=At4g26540 PE=1 SV=1)

HSP 1 Score: 86.2705 bits (212), Expect = 3.484e-16
Identity = 66/259 (25.48%), Postives = 109/259 (42.08%), Query Frame = 3
Query:   48 KDWPKNLEVQFRKKIDTLSKVNHKNFVNLIGFCEEEEPFTRMMVFEYAPNGTLFEHIH-IKESEHLDWGMRLRIAMGMAYCLEHM-HQLNPPIAHNYLNSSAVHLTEDYAAKLSDLSFWNEIA------------------MAEMXXXXXXXXXXXXXXXXXNVYNFGVLLFEMVTGRLPY---LVDNGSLEDWAADYLSGVQPLQQFVDPTL----SSFDEEQLEKLGELIKSCVRADPEKRPTMRDIAAILREITGI 743
            K W K     F  +I TL  + H+N V L+G+C       +++ ++Y PNG+L   +H   +   +DW  R  + +G+A+ L ++ H   P I H  + +  V L   +   L+D      I+                                       +VY++GV+L E++TG+ P    L     L  W  D+L+  +   + +DP L     S   E L+ L  +   CV     +RP M+D+ A+L EI  I
Sbjct:  789 KMWSKEESGAFNSEIKTLGSIRHRNIVRLLGWCSNRN--LKLLFYDYLPNGSLSSRLHGAGKGGCVDWEARYDVVLGVAHALAYLHHDCLPTIIHGDVKAMNVLLGPHFEPYLADFGLARTISGYPNTGIDLAKPTNRPPMAGSYGYMAPEHASMQRITEKSDVYSYGVVLLEVLTGKHPLDPDLPGGAHLVKWVRDHLAEKKDPSRLLDPRLDGRTDSIMHEMLQTLA-VAFLCVSNKANERPLMKDVVAMLTEIRHI 1044          
The following BLAST results are available for this feature:
BLAST of DY258536 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 202
Match NameE-valueIdentityDescription
Y1570_ARATH7.019e-1727.66Probable LRR receptor-like serine/threonine-protei... [more]
ANX1_ARATH9.168e-1728.02Receptor-like protein kinase ANXUR1 OS=Arabidopsis... [more]
ANX2_ARATH1.197e-1628.14Receptor-like protein kinase ANXUR2 OS=Arabidopsis... [more]
WAKLD_ARATH1.564e-1626.16Wall-associated receptor kinase-like 4 OS=Arabidop... [more]
Y5597_ARATH2.042e-1627.83Probable receptor-like protein kinase At5g59700 OS... [more]
Y5487_ARATH2.042e-1627.85Probable LRR receptor-like serine/threonine-protei... [more]
PSKR2_ARATH2.042e-1625.10Phytosulfokine receptor 2 OS=Arabidopsis thaliana ... [more]
BRL1_ARATH2.042e-1627.71Serine/threonine-protein kinase BRI1-like 1 OS=Ara... [more]
APK1B_ARATH2.667e-1626.34Protein kinase APK1B, chloroplastic OS=Arabidopsis... [more]
Y4265_ARATH3.484e-1625.48Probable LRR receptor-like serine/threonine-protei... [more]

Pages

back to top
Properties
Property NameValue
Genbank descriptionKN0AAI2BB02FM1 AbsDev1 Citrus clementina cDNA 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DY258536 ID=DY258536; Name=DY258536; organism=Citrus clementina; type=EST; length=1086bp
CTAATGGAGTTGAAATAGCTGTGGCCTCTGTCTCAGTGGCATCTGCCAAG
GATTGGCCTAAGAACTTAGAAGTGCAGTTTAGGAAGAAGATTGACACGTT
ATCAAAAGTGAACCACAAAAATTTTGTCAATCTTATTGGATTTTGTGAAG
AAGAGGAGCCTTTCACCAGAATGATGGTGTTTGAATATGCTCCTAATGGA
ACACTCTTTGAGCATATACACATTAAAGAATCAGAGCATTTGGACTGGGG
AATGAGGTTGCGGATTGCAATGGGTATGGCTTACTGCCTAGAGCATATGC
ATCAGCTGAACCCACCCATAGCCCACAATTACTTGAACTCTTCAGCTGTC
CATCTGACTGAGGACTATGCAGCCAAATTATCAGACTTAAGCTTCTGGAA
TGAGATAGCCATGGCTGAAATGGCAGCAACTAGCAAAAAACTTTCAAGTG
CACCCTCAGCAAGCCTTGAAAGCAACGTGTACAACTTTGGAGTATTATTA
TTTGAAATGGTAACGGGTAGGCTCCCTTATTTGGTGGACAACGGCTCTCT
AGAAGACTGGGCAGCTGATTATTTGAGTGGAGTGCAACCCCTTCAACAAT
TTGTTGATCCAACTTTAAGCTCTTTTGATGAGGAGCAGCTAGAGAAACTT
GGTGAACTGATAAAATCTTGTGTCCGCGCCGACCCAGAAAAAAGACCGAC
AATGAGAGACATTGCCGCAATATTGAGAGAGATAACCGGAATAACACCAG
ATGGAGCAATCCCAAAACTTTCCCCTCTTTGGTGGGCAGAGATTGAGATT
TTATCTACAGAGGCCATCTAGATTATGAATTTTGGATTGCAAGTATGAAA
AGCTTCAAATTTACCATGTTTTCTAGTTTGGTTAAGCAAAAAAAAAAAAT
CATTGCCTTTTGGTTTCATTACTTTGTGTATAGGTTGATGGAATTGGCAA
AGTATATAAATAAAATCCAAAGATAGTTGGGAAATTCCGGGAATATTTTC
TTTTGTTTTTTGCTTTTCCTTTTAAAAAAAATTTGTGGGGGTGACGGGGG
TGGGAAAAATGCCTACGAAATAAACCCCAAAGGGGG
back to top