DY258549
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of DY258549 vs. ExPASy Swiss-Prot
Match: ATPB_HUMAN (ATP synthase subunit beta, mitochondrial OS=Homo sapiens GN=ATP5B PE=1 SV=3) HSP 1 Score: 219.55 bits (558), Expect = 3.260e-56 Identity = 115/183 (62.84%), Postives = 133/183 (72.68%), Query Frame = 1 Query: 289 GQVCQVIGAVVDVRFDEGLPPILTALEVEDHSVRLVLEVAQHMGEGVVRTIAMDGTEGLVRGQRVLNTGSPITVPVGRVTLGRIMNDIGEPIDEKGDLKTEHYLPIHREAPAFVEQATEQQILVTGIKVDDLLGPYQKXXXXXXXXXXXERKIEPINETNKNVAKVRGVFLVFAGGGEPNREG 837 G++ VIGAVVDV+FDEGLPPIL ALEV+ RLVLEVAQH+GE VRTIAMDGTEGLVRGQ+VL++G+PI +PVG TLGRIMN IGEPIDE+G +KT+ + PIH EAP F+E + EQ+ILVTGIKV DLL PY K K I E NVAK G + VFAG GE REG Sbjct: 61 GRIVAVIGAVVDVQFDEGLPPILNALEVQGRETRLVLEVAQHLGESTVRTIAMDGTEGLVRGQKVLDSGAPIKIPVGPETLGRIMNVIGEPIDERGPIKTKQFAPIHAEAPEFMEMSVEQEILVTGIKVVDLLAPYAKGGKIGLFGGAGVGKTVLIMELINNVAKAHGGYSVFAGVGERTREG 243
BLAST of DY258549 vs. ExPASy Swiss-Prot
Match: ATPBM_CHLRE (ATP synthase subunit beta, mitochondrial OS=Chlamydomonas reinhardtii GN=ATP2 PE=1 SV=1) HSP 1 Score: 218.009 bits (554), Expect = 9.484e-56 Identity = 124/209 (59.33%), Postives = 141/209 (67.46%), Query Frame = 1 Query: 289 GQVCQVIGAVVDVRFDEGLPPILTALEVEDHSVRLVLEVAQHMGEGVVRTIAMDGTEGLVRGQRVLNTGSPITVPVGRVTLGRIMNDIGEPIDEKGDLKTEHYLPIHREAPAFVEQATEQQILVTGIKVDDLLGPYQKXXXXXXXXXXXERKIEPINETNKNVAKVRGVFLVFAGGGEPNREGKMTCNGK*LKRGVISKGKRRLKIKRG 915 G V QVIG VVDVRFD LP IL+ALEV+ H+VRLVLEVAQHMG+ VR +AMD T+GLVRGQ+V+NTGSPI VPVGR TLGRIMN IGEP+DE+G ++ IHREAP F EQ+TEQ+ILVTGIKV DLL PYQ+ K I E NVAK G F VFAG GE REG L R +I G +L KRG Sbjct: 38 GFVSQVIGPVVDVRFDGELPSILSALEVQGHNVRLVLEVAQHMGDNTVRCVAMDSTDGLVRGQKVVNTGSPIKVPVGRGTLGRIMNVIGEPVDEQGPIECSEVWSIHREAPEFTEQSTEQEILVTGIKVVDLLAPYQRGGKIGLFGGAGVGKTVLIMELINNVAKAHGGFSVFAGVGERTREGND------LYREMIESGVIKLGDKRG 240
BLAST of DY258549 vs. ExPASy Swiss-Prot
Match: ATPB_BOVIN (ATP synthase subunit beta, mitochondrial OS=Bos taurus GN=ATP5B PE=1 SV=2) HSP 1 Score: 217.624 bits (553), Expect = 1.239e-55 Identity = 115/183 (62.84%), Postives = 132/183 (72.13%), Query Frame = 1 Query: 289 GQVCQVIGAVVDVRFDEGLPPILTALEVEDHSVRLVLEVAQHMGEGVVRTIAMDGTEGLVRGQRVLNTGSPITVPVGRVTLGRIMNDIGEPIDEKGDLKTEHYLPIHREAPAFVEQATEQQILVTGIKVDDLLGPYQKXXXXXXXXXXXERKIEPINETNKNVAKVRGVFLVFAGGGEPNREG 837 G++ VIGAVVDV+FDEGLPPIL ALEV+ RLVLEVAQH+GE VRTIAMDGTEGLVRGQ+VL++G+PI +PVG TLGRIMN IGEPIDE+G +KT+ + IH EAP FVE + EQ+ILVTGIKV DLL PY K K I E NVAK G + VFAG GE REG Sbjct: 61 GRIVAVIGAVVDVQFDEGLPPILNALEVQGRETRLVLEVAQHLGESTVRTIAMDGTEGLVRGQKVLDSGAPIRIPVGPETLGRIMNVIGEPIDERGPIKTKQFAAIHAEAPEFVEMSVEQEILVTGIKVVDLLAPYAKGGKIGLFGGAGVGKTVLIMELINNVAKAHGGYSVFAGVGERTREG 243
BLAST of DY258549 vs. ExPASy Swiss-Prot
Match: ATPB_CHICK (ATP synthase subunit beta, mitochondrial OS=Gallus gallus GN=ATP5B PE=1 SV=1) HSP 1 Score: 214.927 bits (546), Expect = 8.028e-55 Identity = 114/183 (62.30%), Postives = 131/183 (71.58%), Query Frame = 1 Query: 289 GQVCQVIGAVVDVRFDEGLPPILTALEVEDHSVRLVLEVAQHMGEGVVRTIAMDGTEGLVRGQRVLNTGSPITVPVGRVTLGRIMNDIGEPIDEKGDLKTEHYLPIHREAPAFVEQATEQQILVTGIKVDDLLGPYQKXXXXXXXXXXXERKIEPINETNKNVAKVRGVFLVFAGGGEPNREG 837 G++ VIGAVVDV+FDEGLPPIL ALEV+ RLVLEVAQH+GE VRTIAMDGTEGLVRGQ+VL++G+PI +PVG TLGRIMN IGEPIDE+G + T+ + IH EAP FVE + EQ+ILVTGIKV DLL PY K K I E NVAK G + VFAG GE REG Sbjct: 66 GRIVAVIGAVVDVQFDEGLPPILNALEVQGRETRLVLEVAQHLGENTVRTIAMDGTEGLVRGQKVLDSGAPIRIPVGPETLGRIMNVIGEPIDERGPITTKQFAAIHAEAPEFVEMSVEQKILVTGIKVVDLLAPYAKGGKIGLFGGAGVGKTVLIMELINNVAKAHGGYSVFAGVGERTREG 248
BLAST of DY258549 vs. ExPASy Swiss-Prot
Match: ATPB_DROVI (ATP synthase subunit beta, mitochondrial (Fragment) OS=Drosophila virilis GN=ATPsyn-beta PE=3 SV=1) HSP 1 Score: 213.772 bits (543), Expect = 1.789e-54 Identity = 115/183 (62.84%), Postives = 131/183 (71.58%), Query Frame = 1 Query: 289 GQVCQVIGAVVDVRFDEGLPPILTALEVEDHSVRLVLEVAQHMGEGVVRTIAMDGTEGLVRGQRVLNTGSPITVPVGRVTLGRIMNDIGEPIDEKGDLKTEHYLPIHREAPAFVEQATEQQILVTGIKVDDLLGPYQKXXXXXXXXXXXERKIEPINETNKNVAKVRGVFLVFAGGGEPNREG 837 G++ VIGAVVDV+FD+ LPPIL ALEV++ S RLVLEVAQH+GE VRTIAMDGTEGLVRGQ+VL+TGSPI +PVG TLGRIMN IGEPIDE+G + + PIH EAP FV+ + EQ+ILVTGIKV DLL PY K K I E NVAK G F VFAG GE REG Sbjct: 38 GKIVAVIGAVVDVQFDDNLPPILNALEVDNRSPRLVLEVAQHLGENTVRTIAMDGTEGLVRGQKVLDTGSPIRIPVGAETLGRIMNVIGEPIDERGPIPSAKTSPIHAEAPEFVDMSVEQEILVTGIKVVDLLAPYCKGGKIGLFGGAGVGKTVLIMELINNVAKAHGGFSVFAGVGERTREG 220
BLAST of DY258549 vs. ExPASy Swiss-Prot
Match: ATPB_RHIME (ATP synthase subunit beta OS=Rhizobium meliloti GN=atpD PE=3 SV=1) HSP 1 Score: 209.92 bits (533), Expect = 4.020e-54 Identity = 116/187 (62.03%), Postives = 133/187 (71.12%), Query Frame = 1 Query: 280 GSIGQVCQVIGAVVDVRFDEG-LPPILTALEVEDHSVRLVLEVAQHMGEGVVRTIAMDGTEGLVRGQRVLNTGSPITVPVGRVTLGRIMNDIGEPIDEKGDLKTEHYLPIHREAPAFVEQATEQQILVTGIKVDDLLGPYQKXXXXXXXXXXXERKIEPINETNKNVAKVRGVFLVFAGGGEPNREG 837 G++G+V QVIGAVVDV F+EG LP IL ALE +++ RLVLEVAQH+GE VRTIAMD TEGLVRGQ+V +TG PI VPVG+ TLGRIMN IGEP+DE G LKT IH+EAPA+V+Q+TE QILVTGIKV DLL PY K K I E NVAK G + VFAG GE REG Sbjct: 33 GAVGRVTQVIGAVVDVAFEEGQLPQILNALETDNNGNRLVLEVAQHLGENSVRTIAMDSTEGLVRGQKVADTGGPIAVPVGKETLGRIMNVIGEPVDEAGPLKTSARRAIHQEAPAYVDQSTEAQILVTGIKVVDLLAPYAKGGKIGLFGGAGVGKTVLIMELINNVAKAHGGYSVFAGVGERTREG 219 HSP 2 Score: 23.483 bits (49), Expect = 4.020e-54 Identity = 20/46 (43.48%), Postives = 21/46 (45.65%), Query Frame = 3 Query: 840 NDL*REMIEEGCYK*GEKKAENQKGDLVRTKGMTPLLARAWGGLDG 977 NDL EMIE G K G E K LV + P ARA L G Sbjct: 220 NDLYHEMIESGVNKHG--GGEGSKAALVYGQMNEPPGARARVALTG 263
BLAST of DY258549 vs. ExPASy Swiss-Prot
Match: ATPB_SINMW (ATP synthase subunit beta OS=Sinorhizobium medicae (strain WSM419) GN=atpD PE=3 SV=1) HSP 1 Score: 209.534 bits (532), Expect = 5.240e-54 Identity = 119/205 (58.05%), Postives = 138/205 (67.32%), Query Frame = 1 Query: 235 KKGGGGKITDEFT---GKGSIGQVCQVIGAVVDVRFDEG-LPPILTALEVEDHSVRLVLEVAQHMGEGVVRTIAMDGTEGLVRGQRVLNTGSPITVPVGRVTLGRIMNDIGEPIDEKGDLKTEHYLPIHREAPAFVEQATEQQILVTGIKVDDLLGPYQKXXXXXXXXXXXERKIEPINETNKNVAKVRGVFLVFAGGGEPNREG 837 KK K T G++G+V QVIGAVVDV F+EG LP IL ALE +++ RLVLEVAQH+GE VRTIAMD TEGLVRGQ+V +TG+PI VPVG+ TLGRIMN IGEP+DE G LKT IH++APA+V+Q+TE QILVTGIKV DLL PY K K I E NVAK G + VFAG GE REG Sbjct: 20 KKAASAKTASATTVVAATGAVGRVTQVIGAVVDVAFEEGQLPKILNALETDNNGNRLVLEVAQHLGENSVRTIAMDSTEGLVRGQKVTDTGAPIAVPVGKETLGRIMNVIGEPVDEAGPLKTSARRAIHQDAPAYVDQSTEAQILVTGIKVVDLLAPYAKGGKIGLFGGAGVGKTVLIMELINNVAKAHGGYSVFAGVGERTREG 224 HSP 2 Score: 23.483 bits (49), Expect = 5.240e-54 Identity = 20/46 (43.48%), Postives = 21/46 (45.65%), Query Frame = 3 Query: 840 NDL*REMIEEGCYK*GEKKAENQKGDLVRTKGMTPLLARAWGGLDG 977 NDL EMIE G K G E K LV + P ARA L G Sbjct: 225 NDLYHEMIESGVNKHG--GGEGSKAALVYGQMNEPPGARARVALTG 268
BLAST of DY258549 vs. ExPASy Swiss-Prot
Match: ATPB_DROME (ATP synthase subunit beta, mitochondrial OS=Drosophila melanogaster GN=ATPsyn-beta PE=1 SV=3) HSP 1 Score: 211.846 bits (538), Expect = 6.796e-54 Identity = 118/206 (57.28%), Postives = 141/206 (68.45%), Query Frame = 1 Query: 289 GQVCQVIGAVVDVRFDEGLPPILTALEVEDHSVRLVLEVAQHMGEGVVRTIAMDGTEGLVRGQRVLNTGSPITVPVGRVTLGRIMNDIGEPIDEKGDLKTEHYLPIHREAPAFVEQATEQQILVTGIKVDDLLGPYQKXXXXXXXXXXXERKIEPINETNKNVAKVRGVFLVFAGGGEPNREGKMTCNGK*LKRGVISKGKRRLKI 906 G++ VIGAVVDV+FD+ LPPIL ALEV++ S RLVLEVAQH+GE VRTIAMDGTEGLVRGQ+VL+TG PI +PVG TLGRI+N IGEPIDE+G + T+ IH EAP FV+ + EQ+ILVTGIKV DLL PY K K I E NVAK G + VFAG GE REG N + ++ GVIS + K+ Sbjct: 38 GKIVAVIGAVVDVQFDDNLPPILNALEVDNRSPRLVLEVAQHLGENTVRTIAMDGTEGLVRGQKVLDTGYPIRIPVGAETLGRIINVIGEPIDERGPIDTDKTAAIHAEAPEFVQMSVEQEILVTGIKVVDLLAPYAKGGKIGLFGGAGVGKTVLIMELINNVAKAHGGYSVFAGVGERTREGNDLYN-EMIEGGVISLKDKTSKV 242
BLAST of DY258549 vs. ExPASy Swiss-Prot
Match: ATPB_CYPCA (ATP synthase subunit beta, mitochondrial OS=Cyprinus carpio GN=atp5b PE=2 SV=1) HSP 1 Score: 211.46 bits (537), Expect = 8.876e-54 Identity = 113/183 (61.75%), Postives = 128/183 (69.95%), Query Frame = 1 Query: 289 GQVCQVIGAVVDVRFDEGLPPILTALEVEDHSVRLVLEVAQHMGEGVVRTIAMDGTEGLVRGQRVLNTGSPITVPVGRVTLGRIMNDIGEPIDEKGDLKTEHYLPIHREAPAFVEQATEQQILVTGIKVDDLLGPYQKXXXXXXXXXXXERKIEPINETNKNVAKVRGVFLVFAGGGEPNREG 837 G++ VIGAVVDV+FDE LPPIL ALEV RLVLEVAQH+GE VRTIAMDGTEGLVRGQ+VL+TG+PI +PVG TLGRIMN IGEPIDE+G + T+ PIH EAP F + + EQ+ILVTGIKV DLL PY K K I E NVAK G + VFAG GE REG Sbjct: 51 GRIVAVIGAVVDVQFDEDLPPILNALEVAGRDTRLVLEVAQHLGENTVRTIAMDGTEGLVRGQKVLDTGAPIRIPVGPETLGRIMNVIGEPIDERGPITTKQTAPIHAEAPEFTDMSVEQEILVTGIKVVDLLAPYAKGGKIGLFGGAGVGKTVLIMELINNVAKAHGGYSVFAGVGERTREG 233
BLAST of DY258549 vs. ExPASy Swiss-Prot
Match: ATPB_RHISN (ATP synthase subunit beta OS=Rhizobium sp. (strain NGR234) GN=atpD PE=3 SV=1) HSP 1 Score: 207.608 bits (527), Expect = 1.973e-53 Identity = 118/202 (58.42%), Postives = 136/202 (67.33%), Query Frame = 1 Query: 235 KKGGGGKITDEFTGKGSIGQVCQVIGAVVDVRFDEG-LPPILTALEVEDHSVRLVLEVAQHMGEGVVRTIAMDGTEGLVRGQRVLNTGSPITVPVGRVTLGRIMNDIGEPIDEKGDLKTEHYLPIHREAPAFVEQATEQQILVTGIKVDDLLGPYQKXXXXXXXXXXXERKIEPINETNKNVAKVRGVFLVFAGGGEPNREG 837 KK K T G++G+V QVIGAVVDV F+EG LP IL ALE ++ RLVLEVAQH+GE VRTIAMD TEGLVRGQ V +TG PI+VPVG+ TLGRIMN IGEP+DE G ++T IH++APA+VEQ+TE QILVTGIKV DLL PY K K I E NVAK G + VFAG GE REG Sbjct: 20 KKAATAKTT-AVVATGAVGRVTQVIGAVVDVAFEEGQLPQILNALETDNKGNRLVLEVAQHLGENAVRTIAMDSTEGLVRGQSVTDTGGPISVPVGKETLGRIMNVIGEPVDEAGPVETSSRRAIHQDAPAYVEQSTEAQILVTGIKVVDLLAPYAKGGKIGLFGGAGVGKTVLIMELINNVAKAHGGYSVFAGVGERTREG 220 HSP 2 Score: 23.483 bits (49), Expect = 1.973e-53 Identity = 20/46 (43.48%), Postives = 21/46 (45.65%), Query Frame = 3 Query: 840 NDL*REMIEEGCYK*GEKKAENQKGDLVRTKGMTPLLARAWGGLDG 977 NDL EMIE G K G E K LV + P ARA L G Sbjct: 221 NDLYHEMIESGVNKHG--GGEGSKAALVYGQMNEPPGARARVALTG 264 The following BLAST results are available for this feature:
BLAST of DY258549 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >DY258549 ID=DY258549; Name=DY258549; organism=Citrus clementina; type=EST; length=1270bpback to top |