DY258549
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of DY258549 vs. ExPASy Swiss-Prot
Match: ATPB_CAUSK (ATP synthase subunit beta OS=Caulobacter sp. (strain K31) GN=atpD PE=3 SV=1) HSP 1 Score: 176.407 bits (446), Expect = 3.164e-43 Identity = 100/191 (52.36%), Postives = 120/191 (62.83%), Query Frame = 1 Query: 271 TGKGSIGQVCQVIGAVVDVRFDEGLPPILTALEVEDHSV--RLVLEVAQHMGEGVVRTIAMDGTEGLVRGQRVLNTGSPITVPVGRVTLGRIMNDIGEPIDEKGDLKTEHYLPIHREAPAFVEQATEQQILVTGIKVDDLLGPYQKXXXXXXXXXXXERKIEPINETNKNVAKVRGVFLVFAGGGEPNREG 837 T + G++ QVIGAVVDV F LP IL ALE + + RLV EVAQH+G+ VR IAMD TEGLVRGQ V +TG I VPVG TLGRIMN IGEPIDE+G +K++ + IHR+AP F EQ ++LVTGIKV DL+ PY K K + E N+AK G + V AG GE REG Sbjct: 63 TIRAGTGKLVQVIGAVVDVEFTGELPAILNALETVNIATGQRLVFEVAQHLGQNTVRAIAMDATEGLVRGQEVRDTGQSIRVPVGPGTLGRIMNVIGEPIDEQGPIKSDIFRTIHRDAPTFAEQTNTAEVLVTGIKVIDLMCPYTKGGKIGLFGGAGVGKTVTMQELINNIAKAYGGYSVLAGVGERTREG 253
BLAST of DY258549 vs. ExPASy Swiss-Prot
Match: ATPB_LAWIP (ATP synthase subunit beta OS=Lawsonia intracellularis (strain PHE/MN1-00) GN=atpD PE=3 SV=1) HSP 1 Score: 175.637 bits (444), Expect = 5.398e-43 Identity = 98/190 (51.58%), Postives = 125/190 (65.79%), Query Frame = 1 Query: 283 SIGQVCQVIGAVVDVRFDEG-LPPILTALEVED----HSVRLVLEVAQHMGEGVVRTIAMDGTEGLVRGQRVLNTGSPITVPVGRVTLGRIMNDIGEPIDEKGDLKTEHYLPIHREAPAFVEQATEQQILVTGIKVDDLLGPYQKXXXXXXXXXXXERKIEPINETNKNVAKVRGVFLVFAGGGEPNREG 837 +IG++ QVIGAVVDV F G LPPILTALE+ + + +L+ EVAQH+G+ +VRTIAMD TEGL RG VL+TG PI PVG+ +LGRIMN +G+PID G + T+ YLPIHR+ P+F++Q T + L TGIKV DLL P+ K K + E N+A+ G VFAG GE REG Sbjct: 4 NIGKIVQVIGAVVDVSFPNGKLPPILTALEIHNPNSIDAPKLICEVAQHLGDDIVRTIAMDATEGLKRGMDVLDTGHPIMAPVGKASLGRIMNVVGQPIDGLGVIDTKTYLPIHRKPPSFLDQNTSVEPLETGIKVIDLLVPFPKGGKMGLFGGAGVGKTVILMEMINNIARQHGGISVFAGVGERTREG 193
BLAST of DY258549 vs. ExPASy Swiss-Prot
Match: ATPB_PROMO (ATP synthase subunit beta, sodium ion specific OS=Propionigenium modestum GN=atpD PE=1 SV=2) HSP 1 Score: 175.252 bits (443), Expect = 7.050e-43 Identity = 97/200 (48.50%), Postives = 125/200 (62.50%), Query Frame = 1 Query: 289 GQVCQVIGAVVDVRFDEGLPPILTALEVE-DHSVRLVLEVAQHMGEGVVRTIAMDGTEGLVRGQRVLNTGSPITVPVGRVTLGRIMNDIGEPIDEKGDLKTEHYLPIHREAPAFVEQATEQQILVTGIKVDDLLGPYQKXXXXXXXXXXXERKIEPINETNKNVAKVRGVFLVFAGGGEPNREGKMTCNGK*LKRGVISK 885 G + Q+IG VVDV F+ LP I AL+++ + LV EV QH+G VVR +AMD T+GL RG V++TG ITVPVG+ LGRI+N +GEP+DE G++K E Y PIHREAPAF +Q TE+++ TGIKV DLL PY K K I E N+A+ G VFAG GE REG+ + L+ GV+ K Sbjct: 5 GVITQIIGPVVDVTFENELPRIYNALKIDRGNGEYLVAEVQQHLGNSVVRAVAMDATDGLQRGMEVVDTGPAITVPVGKAVLGRILNVLGEPVDEAGEVKAEEYAPIHREAPAFEDQGTEKEVFETGIKVVDLLAPYVKGGKIGLFGGAGVGKTVLIMELINNIAQGHGGLSVFAGVGERTREGR-DLYDEMLESGVLDK 203
BLAST of DY258549 vs. ExPASy Swiss-Prot
Match: ATPB_GEOLS (ATP synthase subunit beta OS=Geobacter lovleyi (strain ATCC BAA-1151 / DSM 17278 / SZ) GN=atpD PE=3 SV=1) HSP 1 Score: 175.252 bits (443), Expect = 7.050e-43 Identity = 101/191 (52.88%), Postives = 120/191 (62.83%), Query Frame = 1 Query: 283 SIGQVCQVIGAVVDVRFDEG-LPPILTALEV-----EDHSVRLVLEVAQHMGEGVVRTIAMDGTEGLVRGQRVLNTGSPITVPVGRVTLGRIMNDIGEPIDEKGDLKTEHYLPIHREAPAFVEQATEQQILVTGIKVDDLLGPYQKXXXXXXXXXXXERKIEPINETNKNVAKVRGVFLVFAGGGEPNREG 837 +IG++ QVIGAV+DV F+ G LP I AL V +D LVLEVAQH+GE VRTIAMD T+GL RGQ V++TG I PVGR TLGRIMN IGEP+DE G + E IHREAPAF +Q+T+ + TGIKV DLL PY + K I E N+AK G + VFAG GE REG Sbjct: 4 NIGKISQVIGAVIDVEFEPGKLPEIYHALRVTNPAIDDRENNLVLEVAQHLGENSVRTIAMDSTDGLKRGQAVIDTGKQICAPVGRKTLGRIMNVIGEPVDEMGPIGNEKEYGIHREAPAFEDQSTKVEAFTTGIKVVDLLAPYARGGKIGLFGGAGVGKTVLIMELINNIAKQHGGYSVFAGVGERTREG 194
BLAST of DY258549 vs. ExPASy Swiss-Prot
Match: ATPB_CLOK5 (ATP synthase subunit beta OS=Clostridium kluyveri (strain ATCC 8527 / DSM 555 / NCIMB 10680) GN=atpD PE=3 SV=1) HSP 1 Score: 174.866 bits (442), Expect = 9.207e-43 Identity = 87/186 (46.77%), Postives = 123/186 (66.13%), Query Frame = 1 Query: 283 SIGQVCQVIGAVVDVRFDE-GLPPILTALEVEDHSVRLVLEVAQHMGEGVVRTIAMDGTEGLVRGQRVLNTGSPITVPVGRVTLGRIMNDIGEPIDEKGDLKTEHYLPIHREAPAFVEQATEQQILVTGIKVDDLLGPYQKXXXXXXXXXXXERKIEPINETNKNVAKVRGVFLVFAGGGEPNREG 837 +IG+V QVIG VVD++FDE LP I A+ +E + +++ EVAQH+G+ +VRTI+M+ T+GL+RG L+ G+PI+VPVG+ LGR+ N +G+PIDE G+++ + Y PIHR AP+F +Q+ + ++ TGIKV DL+ PYQK K I E N+AK G VF G GE REG Sbjct: 3 NIGKVVQVIGPVVDIKFDEENLPDIYNAISIESGNAKIITEVAQHLGDDIVRTISMESTDGLMRGMDALDIGAPISVPVGKPVLGRLFNMLGQPIDENGEVEADEYSPIHRPAPSFEDQSVKPEMFETGIKVIDLIAPYQKGGKIGLFGGAGVGKTVIIQELINNIAKEHGGLSVFTGVGERTREG 188
BLAST of DY258549 vs. ExPASy Swiss-Prot
Match: ATPB_CARHZ (ATP synthase subunit beta OS=Carboxydothermus hydrogenoformans (strain Z-2901 / DSM 6008) GN=atpD PE=3 SV=1) HSP 1 Score: 174.481 bits (441), Expect = 1.202e-42 Identity = 95/194 (48.97%), Postives = 122/194 (62.89%), Query Frame = 1 Query: 283 SIGQVCQVIGAVVDVRFDEG-LPPILTALEVEDHS--------VRLVLEVAQHMGEGVVRTIAMDGTEGLVRGQRVLNTGSPITVPVGRVTLGRIMNDIGEPIDEKGDLKTEHYLPIHREAPAFVEQATEQQILVTGIKVDDLLGPYQKXXXXXXXXXXXERKIEPINETNKNVAKVRGVFLVFAGGGEPNREG 837 ++G+V QVIG VVDV F+ G +PPI AL++ + L LEVAQH+G VR +AM T+GLVRG +V++TG+PITVPVGR LGR++N +GEPID KG ++++HY PIHR AP EQ+T +IL TGIKV DLL P+ K K + E N+AK G VFAG GE REG Sbjct: 2 NVGRVVQVIGVVVDVEFEPGKVPPIYNALKIRSEDQDTPTEVPINLTLEVAQHLGNNRVRAVAMSSTDGLVRGMKVVDTGAPITVPVGRPVLGRLLNVLGEPIDGKGPVESDHYYPIHRPAPPLEEQSTRAEILETGIKVIDLLVPFLKGGKIGLFGGAGVGKTVIVMELINNIAKQHGGISVFAGVGERTREG 195
BLAST of DY258549 vs. ExPASy Swiss-Prot
Match: ATPB1_GLUOX (ATP synthase subunit beta 1 OS=Gluconobacter oxydans GN=atpD1 PE=3 SV=1) HSP 1 Score: 174.096 bits (440), Expect = 1.570e-42 Identity = 100/184 (54.35%), Postives = 117/184 (63.59%), Query Frame = 1 Query: 286 IGQVCQVIGAVVDVRFDEGLPPILTALEVEDHSVRLVLEVAQHMGEGVVRTIAMDGTEGLVRGQRVLNTGSPITVPVGRVTLGRIMNDIGEPIDEKGDLKTEHYLPIHREAPAFVEQATEQQILVTGIKVDDLLGPYQKXXXXXXXXXXXERKIEPINETNKNVAKVRGVFLVFAGGGEPNREG 837 +G+V QV G VVDV+F+ LP IL AL V++ LVLEVAQ +GE VR IAMD T+GLVRG V +TG I VPVG TLGRI+N +GEPIDE+G + +E PIHR AP+F EQA +ILVTGIKV DLL PY K K I E N+AK G VFAG GE REG Sbjct: 16 VGRVTQVRGPVVDVQFEGDLPFILNALHVQNGDHTLVLEVAQEIGERQVRCIAMDTTDGLVRGTEVRDTGKQIMVPVGPATLGRILNVVGEPIDERGPISSELRFPIHRPAPSFEEQAAASEILVTGIKVVDLLCPYLKGGKIGLFGGAGVGKTVIIQELINNIAKAHGGVSVFAGVGERTREG 199
BLAST of DY258549 vs. ExPASy Swiss-Prot
Match: ATPB_DESDG (ATP synthase subunit beta OS=Desulfovibrio desulfuricans (strain G20) GN=atpD PE=3 SV=1) HSP 1 Score: 172.94 bits (437), Expect = 3.499e-42 Identity = 99/190 (52.11%), Postives = 121/190 (63.68%), Query Frame = 1 Query: 283 SIGQVCQVIGAVVDVRFDEG-LPPILTALEVEDHS----VRLVLEVAQHMGEGVVRTIAMDGTEGLVRGQRVLNTGSPITVPVGRVTLGRIMNDIGEPIDEKGDLKTEHYLPIHREAPAFVEQATEQQILVTGIKVDDLLGPYQKXXXXXXXXXXXERKIEPINETNKNVAKVRGVFLVFAGGGEPNREG 837 +IG++ QVIGAVVDV F +G LP IL AL +++ + L+ EVAQH+G+ VVRTIAMD TEGLVRG V +TG+PI VPVG +LGRIMN +G P+DE GD+ LPIHR AP F EQ T ++L TGIKV DLL P+ K K + E N+AK G VFAG GE REG Sbjct: 3 NIGKITQVIGAVVDVEFADGNLPNILNALVIKNPNNADCPELICEVAQHLGDNVVRTIAMDATEGLVRGMEVTDTGNPIMVPVGSASLGRIMNVVGRPVDEMGDIDAAKSLPIHRPAPEFNEQNTNVELLETGIKVVDLLIPFPKGGKMGLFGGAGVGKTVILMEMINNIAKQHGGISVFAGVGERTREG 192
BLAST of DY258549 vs. ExPASy Swiss-Prot
Match: ATPB3_PELCD (ATP synthase subunit beta 3 OS=Pelobacter carbinolicus (strain DSM 2380 / Gra Bd 1) GN=atpD3 PE=3 SV=1) HSP 1 Score: 172.94 bits (437), Expect = 3.499e-42 Identity = 100/191 (52.36%), Postives = 122/191 (63.87%), Query Frame = 1 Query: 283 SIGQVCQVIGAVVDVRFDEG-LPPILTALEVEDHSV-----RLVLEVAQHMGEGVVRTIAMDGTEGLVRGQRVLNTGSPITVPVGRVTLGRIMNDIGEPIDEKGDLKTEHYLPIHREAPAFVEQATEQQILVTGIKVDDLLGPYQKXXXXXXXXXXXERKIEPINETNKNVAKVRGVFLVFAGGGEPNREG 837 S G++ QVIG V+DV F+ G LP I AL+V + S+ LV EVAQH+GE VR IAMD T+GLVRGQ VLNTG I+VPVGR TLGRI+N IGEP+DE+G ++T+ IHR P FV+Q+T+ + TGIKV DLL PY + K I E N+AK G F VFAG GE REG Sbjct: 2 SNGKITQVIGPVIDVEFEAGELPEIYYALKVSNPSLGDEPWNLVAEVAQHLGENTVRAIAMDSTDGLVRGQEVLNTGRQISVPVGRGTLGRILNVIGEPVDEQGPVETDTTWEIHRPTPEFVDQSTKVEAFETGIKVVDLLAPYARGGKIGLFGGAGVGKTVLIMELIHNIAKKHGGFSVFAGVGERTREG 192
BLAST of DY258549 vs. ExPASy Swiss-Prot
Match: ATPB1_PELCD (ATP synthase subunit beta 1 OS=Pelobacter carbinolicus (strain DSM 2380 / Gra Bd 1) GN=atpD1 PE=3 SV=1) HSP 1 Score: 172.94 bits (437), Expect = 3.499e-42 Identity = 100/191 (52.36%), Postives = 122/191 (63.87%), Query Frame = 1 Query: 283 SIGQVCQVIGAVVDVRFDEG-LPPILTALEVEDHSV-----RLVLEVAQHMGEGVVRTIAMDGTEGLVRGQRVLNTGSPITVPVGRVTLGRIMNDIGEPIDEKGDLKTEHYLPIHREAPAFVEQATEQQILVTGIKVDDLLGPYQKXXXXXXXXXXXERKIEPINETNKNVAKVRGVFLVFAGGGEPNREG 837 S G++ QVIG V+DV F+ G LP I AL+V + S+ LV EVAQH+GE VR IAMD T+GLVRGQ VLNTG I+VPVGR TLGRI+N IGEP+DE+G ++T+ IHR P FV+Q+T+ + TGIKV DLL PY + K I E N+AK G F VFAG GE REG Sbjct: 2 SNGKITQVIGPVIDVEFEAGELPEIYYALKVSNPSLGDEPWNLVAEVAQHLGENTVRAIAMDSTDGLVRGQEVLNTGRQISVPVGRGTLGRILNVIGEPVDEQGPVETDTTWEIHRPTPEFVDQSTKVEAFETGIKVVDLLAPYARGGKIGLFGGAGVGKTVLIMELIHNIAKKHGGFSVFAGVGERTREG 192 The following BLAST results are available for this feature:
BLAST of DY258549 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >DY258549 ID=DY258549; Name=DY258549; organism=Citrus clementina; type=EST; length=1270bpback to top |