DY258549
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of DY258549 vs. ExPASy Swiss-Prot
Match: ATPB_THESQ (ATP synthase subunit beta OS=Thermotoga sp. (strain RQ2) GN=atpD PE=3 SV=1) HSP 1 Score: 168.318 bits (425), Expect = 8.618e-41 Identity = 95/190 (50.00%), Postives = 123/190 (64.74%), Query Frame = 1 Query: 277 KGSIGQVCQVIGAVVDVRF-DEGLPPILTALEVEDHSV--RLVLEVAQHMGEGVVRTIAMDGTEGLVRGQRVLNTGSPITVPVGRVTLGRIMNDIGEPIDEKGDLKTEHYLPIHREAPAFVEQATEQQILVTGIKVDDLLGPYQKXXXXXXXXXXXERKIEPINETNKNVAKVRGVFLVFAGGGEPNREG 837 KGS G + ++G VVDV+F +E LP I ALEV + ++VLEV Q +G+GVVRT+AMD T+GL +G V++TG+PIT PVG+ LGRI+N IGEP+DE G++K + PIHR AP VEQ+TE +IL TGIKV DLL P+ K K + E +N+A F VFAG GE REG Sbjct: 3 KGSKGFIVSIMGPVVDVKFPEEELPDIYNALEVVNPQTGQKVVLEVEQLIGDGVVRTVAMDSTDGLTKGLEVVDTGAPITAPVGKEVLGRILNVIGEPVDEAGEIKAKERWPIHRPAPELVEQSTEIEILETGIKVIDLLAPFPKGGKIGFFGGAGVGKTVLVMELIRNIAIEHKGFSVFAGVGERTREG 192
BLAST of DY258549 vs. ExPASy Swiss-Prot
Match: ATPB_THEP1 (ATP synthase subunit beta OS=Thermotoga petrophila (strain RKU-1 / ATCC BAA-488 / DSM 13995) GN=atpD PE=3 SV=1) HSP 1 Score: 168.318 bits (425), Expect = 8.618e-41 Identity = 95/190 (50.00%), Postives = 123/190 (64.74%), Query Frame = 1 Query: 277 KGSIGQVCQVIGAVVDVRF-DEGLPPILTALEVEDHSV--RLVLEVAQHMGEGVVRTIAMDGTEGLVRGQRVLNTGSPITVPVGRVTLGRIMNDIGEPIDEKGDLKTEHYLPIHREAPAFVEQATEQQILVTGIKVDDLLGPYQKXXXXXXXXXXXERKIEPINETNKNVAKVRGVFLVFAGGGEPNREG 837 KGS G + ++G VVDV+F +E LP I ALEV + ++VLEV Q +G+GVVRT+AMD T+GL +G V++TG+PIT PVG+ LGRI+N IGEP+DE G++K + PIHR AP VEQ+TE +IL TGIKV DLL P+ K K + E +N+A F VFAG GE REG Sbjct: 3 KGSKGFIVSIMGPVVDVKFPEEELPDIYNALEVVNPQTGQKVVLEVEQLIGDGVVRTVAMDSTDGLTKGLEVVDTGAPITAPVGKEVLGRILNVIGEPVDEAGEIKAKERWPIHRPAPELVEQSTEIEILETGIKVIDLLAPFPKGGKIGFFGGAGVGKTVLVMELIRNIAIEHKGFSVFAGVGERTREG 192
BLAST of DY258549 vs. ExPASy Swiss-Prot
Match: ATPB_THEMA (ATP synthase subunit beta OS=Thermotoga maritima GN=atpD PE=3 SV=1) HSP 1 Score: 168.318 bits (425), Expect = 8.618e-41 Identity = 95/190 (50.00%), Postives = 123/190 (64.74%), Query Frame = 1 Query: 277 KGSIGQVCQVIGAVVDVRF-DEGLPPILTALEVEDHSV--RLVLEVAQHMGEGVVRTIAMDGTEGLVRGQRVLNTGSPITVPVGRVTLGRIMNDIGEPIDEKGDLKTEHYLPIHREAPAFVEQATEQQILVTGIKVDDLLGPYQKXXXXXXXXXXXERKIEPINETNKNVAKVRGVFLVFAGGGEPNREG 837 KGS G + ++G VVDV+F +E LP I ALEV + ++VLEV Q +G+GVVRT+AMD T+GL +G V++TG+PIT PVG+ LGRI+N IGEP+DE G++K + PIHR AP VEQ+TE +IL TGIKV DLL P+ K K + E +N+A F VFAG GE REG Sbjct: 3 KGSKGFIVSIMGPVVDVKFPEEELPDIYNALEVVNPQTGQKVVLEVEQLIGDGVVRTVAMDSTDGLTKGLEVVDTGAPITAPVGKEVLGRILNVIGEPVDEAGEIKAKERWPIHRPAPELVEQSTEIEILETGIKVIDLLAPFPKGGKIGFFGGAGVGKTVLVMELIRNIAIEHKGFSVFAGVGERTREG 192
BLAST of DY258549 vs. ExPASy Swiss-Prot
Match: ATPB_FERNB (ATP synthase subunit beta OS=Fervidobacterium nodosum (strain ATCC 35602 / DSM 5306 / Rt17-B1) GN=atpD PE=3 SV=1) HSP 1 Score: 167.548 bits (423), Expect = 1.470e-40 Identity = 95/190 (50.00%), Postives = 119/190 (62.63%), Query Frame = 1 Query: 277 KGSIGQVCQVIGAVVDVRFDEG-LPPILTALEVEDHSV--RLVLEVAQHMGEGVVRTIAMDGTEGLVRGQRVLNTGSPITVPVGRVTLGRIMNDIGEPIDEKGDLKTEHYLPIHREAPAFVEQATEQQILVTGIKVDDLLGPYQKXXXXXXXXXXXERKIEPINETNKNVAKVRGVFLVFAGGGEPNREG 837 K SIG++ ++IG VVDV+F EG LP I AL V + +L+LEV Q +G+ VRT+AMD T+GL+RG V NTG PI PVGR LGR++N IGEPIDE G+LK Y PIHR AP+ EQ TE +IL TG+KV DLL P+ K K + E +N+A F +FAG GE REG Sbjct: 3 KKSIGKIVRIIGPVVDVKFSEGELPDIYDALVVNNPQTGKKLILEVEQLIGDNTVRTVAMDSTDGLIRGMEVENTGEPIKAPVGRGILGRMINVIGEPIDENGELKDVEYWPIHRPAPSMAEQKTEIEILETGLKVIDLLAPFPKGGKIGFFGGAGVGKTVLVMEMIRNIAIEHKGFSMFAGVGERTREG 192
BLAST of DY258549 vs. ExPASy Swiss-Prot
Match: ATPB_FERIS (ATP synthase subunit beta OS=Fervidobacterium islandicum GN=atpD PE=3 SV=1) HSP 1 Score: 167.548 bits (423), Expect = 1.470e-40 Identity = 95/190 (50.00%), Postives = 120/190 (63.16%), Query Frame = 1 Query: 277 KGSIGQVCQVIGAVVDVRFDEG-LPPILTALEVEDHSV--RLVLEVAQHMGEGVVRTIAMDGTEGLVRGQRVLNTGSPITVPVGRVTLGRIMNDIGEPIDEKGDLKTEHYLPIHREAPAFVEQATEQQILVTGIKVDDLLGPYQKXXXXXXXXXXXERKIEPINETNKNVAKVRGVFLVFAGGGEPNREG 837 K S+G++ ++IG VVDV+F EG LP I AL V + +L+LEV Q +G+ +VRT+AMD T+GLVRG V NTG PI PVGR LGR+ N IGEPIDE+G+LK Y PIHR AP+ EQ TE +IL TG+KV DLL P+ K K + E +N+A F +FAG GE REG Sbjct: 3 KKSVGKIVRIIGPVVDVKFQEGDLPDIYDALVVINPQTGKKLILEVEQLIGDNIVRTVAMDSTDGLVRGLEVENTGEPIKAPVGRGVLGRMFNVIGEPIDEQGELKDIEYWPIHRPAPSMTEQKTEIEILETGLKVIDLLAPFPKGGKIGFFGGAGVGKTVLVMEMIRNIAIEHHGFSIFAGVGERTREG 192
BLAST of DY258549 vs. ExPASy Swiss-Prot
Match: ATPB_BDEBA (ATP synthase subunit beta OS=Bdellovibrio bacteriovorus GN=atpD PE=3 SV=1) HSP 1 Score: 167.548 bits (423), Expect = 1.470e-40 Identity = 99/191 (51.83%), Postives = 119/191 (62.30%), Query Frame = 1 Query: 283 SIGQVCQVIGAVVDVRFDEG-LPPILTALEVE-----DHSVRLVLEVAQHMGEGVVRTIAMDGTEGLVRGQRVLNTGSPITVPVGRVTLGRIMNDIGEPIDEKGDLKTEHYLPIHREAPAFVEQATEQQILVTGIKVDDLLGPYQKXXXXXXXXXXXERKIEPINETNKNVAKVRGVFLVFAGGGEPNREG 837 + G+V QV+G VVDV F+ G LP I +AL V D LVLEVAQH+G+GVVRTI+MD TEGLVRG++V G+ IT PVGR LGRI+N +GEPIDE G + + IHR AP F +QAT +L+TGIKV DLL PY K K I E +N+A G F VFAG GE REG Sbjct: 2 AFGKVKQVMGPVVDVEFEGGELPAINSALRVSNKFISDVEFNLVLEVAQHLGDGVVRTISMDQTEGLVRGEKVKALGTQITAPVGREALGRIINVVGEPIDEMGPVNAKEQWGIHRTAPKFEDQATAAAMLMTGIKVVDLLAPYAKGGKIGLFGGAGVGKTVLIQELIRNIATEHGGFSVFAGVGERTREG 192
BLAST of DY258549 vs. ExPASy Swiss-Prot
Match: ATPB_CLOPH (ATP synthase subunit beta OS=Clostridium phytofermentans (strain ATCC 700394 / DSM 18823 / ISDg) GN=atpD PE=3 SV=1) HSP 1 Score: 166.777 bits (421), Expect = 2.507e-40 Identity = 94/189 (49.74%), Postives = 120/189 (63.49%), Query Frame = 1 Query: 277 KGSIGQVCQVIGAVVDVRFDEG-LPPILTALEVEDHSV-RLVLEVAQHMGEGVVRTIAMDGTEGLVRGQRVLNTGSPITVPVGRVTLGRIMNDIGEPIDEKGDLKTEHYLPIHREAPAFVEQATEQQILVTGIKVDDLLGPYQKXXXXXXXXXXXERKIEPINETNKNVAKVRGVFLVFAGGGEPNREG 837 K +G++ Q+IGAV+D++F EG LP I A++++ + LV+EVAQH+G+ VR IAM T+GLVRG TG+PI+VPVG TLGR+ N +G PIDEK K Y PIHR+APAF EQ+T+ +IL TGIKV DLL PYQK K I E N+A G + VF G GE REG Sbjct: 9 KSGLGKITQIIGAVLDIKFAEGKLPEIYEAIKIKKNDGDTLVVEVAQHLGDDTVRCIAMGPTDGLVRGMDAEGTGAPISVPVGENTLGRMFNVLGNPIDEKEAPKNVEYYPIHRKAPAFEEQSTQTEILETGIKVVDLLCPYQKGGKIGLFGGAGVGKTVLIQELITNIATEHGGYSVFTGVGERTREG 197
BLAST of DY258549 vs. ExPASy Swiss-Prot
Match: ATPB_SYNFM (ATP synthase subunit beta OS=Syntrophobacter fumaroxidans (strain DSM 10017 / MPOB) GN=atpD PE=3 SV=1) HSP 1 Score: 166.392 bits (420), Expect = 3.275e-40 Identity = 94/191 (49.21%), Postives = 119/191 (62.30%), Query Frame = 1 Query: 283 SIGQVCQVIGAVVDVRFDEG-LPPILTALEVE-----DHSVRLVLEVAQHMGEGVVRTIAMDGTEGLVRGQRVLNTGSPITVPVGRVTLGRIMNDIGEPIDEKGDLKTEHYLPIHREAPAFVEQATEQQILVTGIKVDDLLGPYQKXXXXXXXXXXXERKIEPINETNKNVAKVRGVFLVFAGGGEPNREG 837 ++G++ QVIG VVDV F EG LPP+LTAL V D LVLEVAQH+G+ VVRTI MD T+GLVRG V +TG+PI +PVG LGR++N +G +D G + T+ Y+PIHR APAF EQ T ++L TG+KV DLL P+ + K + E N+A G VFAG GE REG Sbjct: 2 NLGKIVQVIGNVVDVEFGEGKLPPLLTALFVSNPGLNDQEDNLVLEVAQHLGDNVVRTIGMDLTDGLVRGMPVKDTGNPIMMPVGAAVLGRVINVVGRTVDGLGPVNTDTYMPIHRTAPAFTEQDTSVKVLETGVKVIDLLVPFPRGGKMGMFGGAGVGKTVVMMEMIHNIAMQHGGISVFAGVGERTREG 192
BLAST of DY258549 vs. ExPASy Swiss-Prot
Match: ATPB_ANATD (ATP synthase subunit beta OS=Anaerocellum thermophilum (strain DSM 6725 / Z-1320) GN=atpD PE=3 SV=1) HSP 1 Score: 166.007 bits (419), Expect = 4.277e-40 Identity = 89/186 (47.85%), Postives = 113/186 (60.75%), Query Frame = 1 Query: 283 SIGQVCQVIGAVVDVRFD-EGLPPILTALEVEDHSVRLVLEVAQHMGEGVVRTIAMDGTEGLVRGQRVLNTGSPITVPVGRVTLGRIMNDIGEPIDEKGDLKTEHYLPIHREAPAFVEQATEQQILVTGIKVDDLLGPYQKXXXXXXXXXXXERKIEPINETNKNVAKVRGVFLVFAGGGEPNREG 837 ++G V Q+IG V+D+RF+ E LP I A+E+ +LV EVAQH+G VR +A+ T+GL RG + ++TG PI VPVGR TLGRI N +GEPID KG++ Y PIHR AP+F EQ +I TGIKV DLL PY K K I E +N+A G F +F G GE REG Sbjct: 4 NVGYVVQIIGPVIDIRFESENLPAINNAIEIHFDGKKLVAEVAQHLGNDTVRCVALGSTDGLRRGVKAIDTGGPIKVPVGRGTLGRIFNVLGEPIDNKGEVVASDYWPIHRSAPSFEEQVPAVEIFETGIKVIDLLAPYAKGGKIGLFGGAGVGKTVLIMELIRNIATEHGGFSIFTGVGERTREG 189
BLAST of DY258549 vs. ExPASy Swiss-Prot
Match: ATPB_WOLPP (ATP synthase subunit beta OS=Wolbachia pipientis subsp. Culex pipiens (strain wPip) GN=atpD PE=3 SV=1) HSP 1 Score: 165.622 bits (418), Expect = 5.586e-40 Identity = 93/188 (49.47%), Postives = 122/188 (64.89%), Query Frame = 1 Query: 283 SIGQVCQVIGAVVDVRFDEGLPPILTALE--VEDHSVRLVLEVAQHMGEGVVRTIAMDGTEGLVRGQRVLNTGSPITVPVGRVTLGRIMNDIGEPIDEKGDLKTEHYL-PIHREAPAFVEQATEQQILVTGIKVDDLLGPYQKXXXXXXXXXXXERKIEPINETNKNVAKVRGVFLVFAGGGEPNREG 837 S G+V ++ AVVD++F++GLP I AL+ ++ LVLEV+QH+G+ +VR IAMD T+G+ RG ++TG+PI+VPVGR TLGRI N +GE IDE G LK ++ L PIHR P+F EQ ++++LVTGIKV DLL PY K K I E N+AK F VFAG GE REG Sbjct: 2 STGKVVKITQAVVDLKFEDGLPKIFNALKSKLKYKGKELVLEVSQHIGDNIVRCIAMDSTDGMSRGDEFVDTGAPISVPVGRSTLGRIFNVVGELIDECGPLKGKYDLEPIHRSPPSFTEQKIQEEVLVTGIKVIDLLAPYLKGGKIGLFGGAGVGKTVLIMELINNIAKAHKGFSVFAGVGERTREG 189 The following BLAST results are available for this feature:
BLAST of DY258549 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >DY258549 ID=DY258549; Name=DY258549; organism=Citrus clementina; type=EST; length=1270bpback to top |