DY258549
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of DY258549 vs. ExPASy Swiss-Prot
Match: ATPB_HEMPU (ATP synthase subunit beta, mitochondrial OS=Hemicentrotus pulcherrimus PE=2 SV=1) HSP 1 Score: 205.297 bits (521), Expect = 6.361e-52 Identity = 109/183 (59.56%), Postives = 129/183 (70.49%), Query Frame = 1 Query: 289 GQVCQVIGAVVDVRFDEGLPPILTALEVEDHSVRLVLEVAQHMGEGVVRTIAMDGTEGLVRGQRVLNTGSPITVPVGRVTLGRIMNDIGEPIDEKGDLKTEHYLPIHREAPAFVEQATEQQILVTGIKVDDLLGPYQKXXXXXXXXXXXERKIEPINETNKNVAKVRGVFLVFAGGGEPNREG 837 GQ+ VIGAVVDV+F++ LPPIL ALEV+ + RLVLEVAQH+GE VRTIAMDGTEGL+RGQ+ ++TGSPI++PVG TLGRI+N IGEPIDE+G + T+ IH EAP FVE + Q+ILVTGIKV DLL PY K K I E NVAK G + VFAG GE REG Sbjct: 56 GQIVAVIGAVVDVQFEDDLPPILNALEVQGRTSRLVLEVAQHLGENTVRTIAMDGTEGLIRGQKCVDTGSPISIPVGPETLGRIINVIGEPIDERGPIGTDRRSAIHAEAPEFVEMSVNQEILVTGIKVVDLLAPYAKGGKIGLFGGAGVGKTVLIMELINNVAKAHGGYSVFAGVGERTREG 238
BLAST of DY258549 vs. ExPASy Swiss-Prot
Match: ATPB_BRUSU (ATP synthase subunit beta OS=Brucella suis GN=atpD PE=3 SV=1) HSP 1 Score: 200.675 bits (509), Expect = 1.787e-51 Identity = 112/187 (59.89%), Postives = 128/187 (68.45%), Query Frame = 1 Query: 280 GSIGQVCQVIGAVVDVRFDEG-LPPILTALEVEDHSVRLVLEVAQHMGEGVVRTIAMDGTEGLVRGQRVLNTGSPITVPVGRVTLGRIMNDIGEPIDEKGDLKTEHYLPIHREAPAFVEQATEQQILVTGIKVDDLLGPYQKXXXXXXXXXXXERKIEPINETNKNVAKVRGVFLVFAGGGEPNREG 837 G+IG + QVIGAVVDV+F EG LP IL ALEV++ RLVLEVAQH+GE VRTIAMD TEGLVRGQ +TG PI VPVG TLGRIMN IGEP+DE G +KT+ IH+ AP ++EQ+TE +ILVTGIKV DLL PY K K I E NVAK G + VFAG GE REG Sbjct: 50 GAIGHITQVIGAVVDVKFPEGQLPLILNALEVDNQGHRLVLEVAQHLGEDTVRTIAMDATEGLVRGQEARDTGEPIMVPVGVETLGRIMNVIGEPVDEAGPIKTKATRAIHQNAPEYIEQSTEAEILVTGIKVVDLLAPYAKGGKIGLFGGAGVGKTVLIMELINNVAKAHGGYSVFAGVGERTREG 236 HSP 2 Score: 23.8682 bits (50), Expect = 1.787e-51 Identity = 20/46 (43.48%), Postives = 21/46 (45.65%), Query Frame = 3 Query: 840 NDL*REMIEEGCYK*GEKKAENQKGDLVRTKGMTPLLARAWGGLDG 977 NDL EMIE G K G E K LV + P ARA L G Sbjct: 237 NDLYHEMIESGVNKLG--GGEGSKAALVYGQMNEPPGARARVALSG 280
BLAST of DY258549 vs. ExPASy Swiss-Prot
Match: ATPB_BRUSI (ATP synthase subunit beta OS=Brucella suis (strain ATCC 23445 / NCTC 10510) GN=atpD PE=3 SV=1) HSP 1 Score: 200.675 bits (509), Expect = 1.787e-51 Identity = 112/187 (59.89%), Postives = 128/187 (68.45%), Query Frame = 1 Query: 280 GSIGQVCQVIGAVVDVRFDEG-LPPILTALEVEDHSVRLVLEVAQHMGEGVVRTIAMDGTEGLVRGQRVLNTGSPITVPVGRVTLGRIMNDIGEPIDEKGDLKTEHYLPIHREAPAFVEQATEQQILVTGIKVDDLLGPYQKXXXXXXXXXXXERKIEPINETNKNVAKVRGVFLVFAGGGEPNREG 837 G+IG + QVIGAVVDV+F EG LP IL ALEV++ RLVLEVAQH+GE VRTIAMD TEGLVRGQ +TG PI VPVG TLGRIMN IGEP+DE G +KT+ IH+ AP ++EQ+TE +ILVTGIKV DLL PY K K I E NVAK G + VFAG GE REG Sbjct: 50 GAIGHITQVIGAVVDVKFPEGQLPLILNALEVDNQGHRLVLEVAQHLGEDTVRTIAMDATEGLVRGQEARDTGEPIMVPVGVETLGRIMNVIGEPVDEAGPIKTKATRAIHQNAPEYIEQSTEAEILVTGIKVVDLLAPYAKGGKIGLFGGAGVGKTVLIMELINNVAKAHGGYSVFAGVGERTREG 236 HSP 2 Score: 23.8682 bits (50), Expect = 1.787e-51 Identity = 20/46 (43.48%), Postives = 21/46 (45.65%), Query Frame = 3 Query: 840 NDL*REMIEEGCYK*GEKKAENQKGDLVRTKGMTPLLARAWGGLDG 977 NDL EMIE G K G E K LV + P ARA L G Sbjct: 237 NDLYHEMIESGVNKLG--GGEGSKAALVYGQMNEPPGARARVALSG 280
BLAST of DY258549 vs. ExPASy Swiss-Prot
Match: ATPB_BRUO2 (ATP synthase subunit beta OS=Brucella ovis (strain ATCC 25840 / 63/290 / NCTC 10512) GN=atpD PE=3 SV=1) HSP 1 Score: 200.675 bits (509), Expect = 1.787e-51 Identity = 112/187 (59.89%), Postives = 128/187 (68.45%), Query Frame = 1 Query: 280 GSIGQVCQVIGAVVDVRFDEG-LPPILTALEVEDHSVRLVLEVAQHMGEGVVRTIAMDGTEGLVRGQRVLNTGSPITVPVGRVTLGRIMNDIGEPIDEKGDLKTEHYLPIHREAPAFVEQATEQQILVTGIKVDDLLGPYQKXXXXXXXXXXXERKIEPINETNKNVAKVRGVFLVFAGGGEPNREG 837 G+IG + QVIGAVVDV+F EG LP IL ALEV++ RLVLEVAQH+GE VRTIAMD TEGLVRGQ +TG PI VPVG TLGRIMN IGEP+DE G +KT+ IH+ AP ++EQ+TE +ILVTGIKV DLL PY K K I E NVAK G + VFAG GE REG Sbjct: 50 GAIGHITQVIGAVVDVKFPEGQLPLILNALEVDNQGHRLVLEVAQHLGEDTVRTIAMDATEGLVRGQEARDTGEPIMVPVGVETLGRIMNVIGEPVDEAGPIKTKATRAIHQNAPEYIEQSTEAEILVTGIKVVDLLAPYAKGGKIGLFGGAGVGKTVLIMELINNVAKAHGGYSVFAGVGERTREG 236 HSP 2 Score: 23.8682 bits (50), Expect = 1.787e-51 Identity = 20/46 (43.48%), Postives = 21/46 (45.65%), Query Frame = 3 Query: 840 NDL*REMIEEGCYK*GEKKAENQKGDLVRTKGMTPLLARAWGGLDG 977 NDL EMIE G K G E K LV + P ARA L G Sbjct: 237 NDLYHEMIESGVNKLG--GGEGSKAALVYGQMNEPPGARARVALSG 280
BLAST of DY258549 vs. ExPASy Swiss-Prot
Match: ATPB_BRUME (ATP synthase subunit beta OS=Brucella melitensis GN=atpD PE=3 SV=1) HSP 1 Score: 200.675 bits (509), Expect = 1.787e-51 Identity = 112/187 (59.89%), Postives = 128/187 (68.45%), Query Frame = 1 Query: 280 GSIGQVCQVIGAVVDVRFDEG-LPPILTALEVEDHSVRLVLEVAQHMGEGVVRTIAMDGTEGLVRGQRVLNTGSPITVPVGRVTLGRIMNDIGEPIDEKGDLKTEHYLPIHREAPAFVEQATEQQILVTGIKVDDLLGPYQKXXXXXXXXXXXERKIEPINETNKNVAKVRGVFLVFAGGGEPNREG 837 G+IG + QVIGAVVDV+F EG LP IL ALEV++ RLVLEVAQH+GE VRTIAMD TEGLVRGQ +TG PI VPVG TLGRIMN IGEP+DE G +KT+ IH+ AP ++EQ+TE +ILVTGIKV DLL PY K K I E NVAK G + VFAG GE REG Sbjct: 50 GAIGHITQVIGAVVDVKFPEGQLPLILNALEVDNQGHRLVLEVAQHLGEDTVRTIAMDATEGLVRGQEARDTGEPIMVPVGVETLGRIMNVIGEPVDEAGPIKTKATRAIHQNAPEYIEQSTEAEILVTGIKVVDLLAPYAKGGKIGLFGGAGVGKTVLIMELINNVAKAHGGYSVFAGVGERTREG 236 HSP 2 Score: 23.8682 bits (50), Expect = 1.787e-51 Identity = 20/46 (43.48%), Postives = 21/46 (45.65%), Query Frame = 3 Query: 840 NDL*REMIEEGCYK*GEKKAENQKGDLVRTKGMTPLLARAWGGLDG 977 NDL EMIE G K G E K LV + P ARA L G Sbjct: 237 NDLYHEMIESGVNKLG--GGEGSKAALVYGQMNEPPGARARVALSG 280
BLAST of DY258549 vs. ExPASy Swiss-Prot
Match: ATPB_BRUC2 (ATP synthase subunit beta OS=Brucella canis (strain ATCC 23365 / NCTC 10854) GN=atpD PE=3 SV=1) HSP 1 Score: 200.675 bits (509), Expect = 1.787e-51 Identity = 112/187 (59.89%), Postives = 128/187 (68.45%), Query Frame = 1 Query: 280 GSIGQVCQVIGAVVDVRFDEG-LPPILTALEVEDHSVRLVLEVAQHMGEGVVRTIAMDGTEGLVRGQRVLNTGSPITVPVGRVTLGRIMNDIGEPIDEKGDLKTEHYLPIHREAPAFVEQATEQQILVTGIKVDDLLGPYQKXXXXXXXXXXXERKIEPINETNKNVAKVRGVFLVFAGGGEPNREG 837 G+IG + QVIGAVVDV+F EG LP IL ALEV++ RLVLEVAQH+GE VRTIAMD TEGLVRGQ +TG PI VPVG TLGRIMN IGEP+DE G +KT+ IH+ AP ++EQ+TE +ILVTGIKV DLL PY K K I E NVAK G + VFAG GE REG Sbjct: 50 GAIGHITQVIGAVVDVKFPEGQLPLILNALEVDNQGHRLVLEVAQHLGEDTVRTIAMDATEGLVRGQEARDTGEPIMVPVGVETLGRIMNVIGEPVDEAGPIKTKATRAIHQNAPEYIEQSTEAEILVTGIKVVDLLAPYAKGGKIGLFGGAGVGKTVLIMELINNVAKAHGGYSVFAGVGERTREG 236 HSP 2 Score: 23.8682 bits (50), Expect = 1.787e-51 Identity = 20/46 (43.48%), Postives = 21/46 (45.65%), Query Frame = 3 Query: 840 NDL*REMIEEGCYK*GEKKAENQKGDLVRTKGMTPLLARAWGGLDG 977 NDL EMIE G K G E K LV + P ARA L G Sbjct: 237 NDLYHEMIESGVNKLG--GGEGSKAALVYGQMNEPPGARARVALSG 280
BLAST of DY258549 vs. ExPASy Swiss-Prot
Match: ATPB_BRUAB (ATP synthase subunit beta OS=Brucella abortus GN=atpD PE=3 SV=1) HSP 1 Score: 200.675 bits (509), Expect = 1.787e-51 Identity = 112/187 (59.89%), Postives = 128/187 (68.45%), Query Frame = 1 Query: 280 GSIGQVCQVIGAVVDVRFDEG-LPPILTALEVEDHSVRLVLEVAQHMGEGVVRTIAMDGTEGLVRGQRVLNTGSPITVPVGRVTLGRIMNDIGEPIDEKGDLKTEHYLPIHREAPAFVEQATEQQILVTGIKVDDLLGPYQKXXXXXXXXXXXERKIEPINETNKNVAKVRGVFLVFAGGGEPNREG 837 G+IG + QVIGAVVDV+F EG LP IL ALEV++ RLVLEVAQH+GE VRTIAMD TEGLVRGQ +TG PI VPVG TLGRIMN IGEP+DE G +KT+ IH+ AP ++EQ+TE +ILVTGIKV DLL PY K K I E NVAK G + VFAG GE REG Sbjct: 50 GAIGHITQVIGAVVDVKFPEGQLPLILNALEVDNQGHRLVLEVAQHLGEDTVRTIAMDATEGLVRGQEARDTGEPIMVPVGVETLGRIMNVIGEPVDEAGPIKTKATRAIHQNAPEYIEQSTEAEILVTGIKVVDLLAPYAKGGKIGLFGGAGVGKTVLIMELINNVAKAHGGYSVFAGVGERTREG 236 HSP 2 Score: 23.8682 bits (50), Expect = 1.787e-51 Identity = 20/46 (43.48%), Postives = 21/46 (45.65%), Query Frame = 3 Query: 840 NDL*REMIEEGCYK*GEKKAENQKGDLVRTKGMTPLLARAWGGLDG 977 NDL EMIE G K G E K LV + P ARA L G Sbjct: 237 NDLYHEMIESGVNKLG--GGEGSKAALVYGQMNEPPGARARVALSG 280
BLAST of DY258549 vs. ExPASy Swiss-Prot
Match: ATPB_BRUA2 (ATP synthase subunit beta OS=Brucella abortus (strain 2308) GN=atpD PE=3 SV=1) HSP 1 Score: 200.675 bits (509), Expect = 1.787e-51 Identity = 112/187 (59.89%), Postives = 128/187 (68.45%), Query Frame = 1 Query: 280 GSIGQVCQVIGAVVDVRFDEG-LPPILTALEVEDHSVRLVLEVAQHMGEGVVRTIAMDGTEGLVRGQRVLNTGSPITVPVGRVTLGRIMNDIGEPIDEKGDLKTEHYLPIHREAPAFVEQATEQQILVTGIKVDDLLGPYQKXXXXXXXXXXXERKIEPINETNKNVAKVRGVFLVFAGGGEPNREG 837 G+IG + QVIGAVVDV+F EG LP IL ALEV++ RLVLEVAQH+GE VRTIAMD TEGLVRGQ +TG PI VPVG TLGRIMN IGEP+DE G +KT+ IH+ AP ++EQ+TE +ILVTGIKV DLL PY K K I E NVAK G + VFAG GE REG Sbjct: 50 GAIGHITQVIGAVVDVKFPEGQLPLILNALEVDNQGHRLVLEVAQHLGEDTVRTIAMDATEGLVRGQEARDTGEPIMVPVGVETLGRIMNVIGEPVDEAGPIKTKATRAIHQNAPEYIEQSTEAEILVTGIKVVDLLAPYAKGGKIGLFGGAGVGKTVLIMELINNVAKAHGGYSVFAGVGERTREG 236 HSP 2 Score: 23.8682 bits (50), Expect = 1.787e-51 Identity = 20/46 (43.48%), Postives = 21/46 (45.65%), Query Frame = 3 Query: 840 NDL*REMIEEGCYK*GEKKAENQKGDLVRTKGMTPLLARAWGGLDG 977 NDL EMIE G K G E K LV + P ARA L G Sbjct: 237 NDLYHEMIESGVNKLG--GGEGSKAALVYGQMNEPPGARARVALSG 280
BLAST of DY258549 vs. ExPASy Swiss-Prot
Match: ATPB_OCHA4 (ATP synthase subunit beta OS=Ochrobactrum anthropi (strain ATCC 49188 / DSM 6882 / NCTC 12168) GN=atpD PE=3 SV=1) HSP 1 Score: 200.675 bits (509), Expect = 1.787e-51 Identity = 110/187 (58.82%), Postives = 130/187 (69.52%), Query Frame = 1 Query: 280 GSIGQVCQVIGAVVDVRFDEG-LPPILTALEVEDHSVRLVLEVAQHMGEGVVRTIAMDGTEGLVRGQRVLNTGSPITVPVGRVTLGRIMNDIGEPIDEKGDLKTEHYLPIHREAPAFVEQATEQQILVTGIKVDDLLGPYQKXXXXXXXXXXXERKIEPINETNKNVAKVRGVFLVFAGGGEPNREG 837 G++G++ QVIGAVVDV+F++G LP IL ALE ++ RLVLEVAQH+GE VRTIAMD TEGLVRG V +TG+PI VPVG TLGRIMN IGEP+DE G +KT IH+EAP ++EQ+TE +ILVTGIKV DLL PY K K I E NVAK G + VFAG GE REG Sbjct: 46 GAVGKITQVIGAVVDVQFEDGQLPLILNALETDNLGSRLVLEVAQHLGENTVRTIAMDSTEGLVRGHEVRDTGNPIMVPVGEETLGRIMNVIGEPVDEAGPIKTTARRAIHQEAPEYIEQSTEAEILVTGIKVVDLLAPYAKGGKIGLFGGAGVGKTVLIMELINNVAKAHGGYSVFAGVGERTREG 232 HSP 2 Score: 23.8682 bits (50), Expect = 1.787e-51 Identity = 20/46 (43.48%), Postives = 21/46 (45.65%), Query Frame = 3 Query: 840 NDL*REMIEEGCYK*GEKKAENQKGDLVRTKGMTPLLARAWGGLDG 977 NDL EMIE G K G E K LV + P ARA L G Sbjct: 233 NDLYHEMIESGVNKLG--GGEGSKAALVYGQMNEPPGARARVALSG 276
BLAST of DY258549 vs. ExPASy Swiss-Prot
Match: ATPB_AGRT5 (ATP synthase subunit beta OS=Agrobacterium tumefaciens (strain C58 / ATCC 33970) GN=atpD PE=3 SV=1) HSP 1 Score: 202.601 bits (514), Expect = 4.123e-51 Identity = 112/183 (61.20%), Postives = 128/183 (69.95%), Query Frame = 1 Query: 289 GQVCQVIGAVVDVRFDEGLPPILTALEVEDHSVRLVLEVAQHMGEGVVRTIAMDGTEGLVRGQRVLNTGSPITVPVGRVTLGRIMNDIGEPIDEKGDLKTEHYLPIHREAPAFVEQATEQQILVTGIKVDDLLGPYQKXXXXXXXXXXXERKIEPINETNKNVAKVRGVFLVFAGGGEPNREG 837 G+V QVIGAVVDV F+ LPPIL ALE +++ RLVLEVAQH+GE VVRTIAMD TEGLVRGQ V +TG+PI VPVG TLGRIMN IGEP+DE G + T IH++AP++VEQ+TE QILVTGIKV DLL PY K K I E NVAK G + VFAG GE REG Sbjct: 17 GKVTQVIGAVVDVAFEGELPPILNALETQNNGNRLVLEVAQHLGENVVRTIAMDSTEGLVRGQSVADTGAPIEVPVGLETLGRIMNVIGEPVDEAGPIVTAKKRAIHQDAPSYVEQSTEGQILVTGIKVVDLLAPYAKGGKIGLFGGAGVGKTVLIMELINNVAKAHGGYSVFAGVGERTREG 199 The following BLAST results are available for this feature:
BLAST of DY258549 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >DY258549 ID=DY258549; Name=DY258549; organism=Citrus clementina; type=EST; length=1270bpback to top |