DY258549
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of DY258549 vs. ExPASy Swiss-Prot
Match: ATPB_RHOCA (ATP synthase subunit beta OS=Rhodobacter capsulatus GN=atpD PE=1 SV=3) HSP 1 Score: 201.06 bits (510), Expect = 1.200e-50 Identity = 110/185 (59.46%), Postives = 125/185 (67.57%), Query Frame = 1 Query: 283 SIGQVCQVIGAVVDVRFDEGLPPILTALEVEDHSVRLVLEVAQHMGEGVVRTIAMDGTEGLVRGQRVLNTGSPITVPVGRVTLGRIMNDIGEPIDEKGDLKTEHYLPIHREAPAFVEQATEQQILVTGIKVDDLLGPYQKXXXXXXXXXXXERKIEPINETNKNVAKVRGVFLVFAGGGEPNREG 837 S G+V QVIGAVVDV+F++GLP IL ALE ++ RLVLEVAQH+GE VRTIAMD TEGLVRG V +TG PITVPVG TLGRI+N IGEP+DE+GD+ IH+ AP F Q+TE QILVTGIKV DLL PY K K I E N+AKV F VFAG GE REG Sbjct: 3 SKGKVTQVIGAVVDVQFEDGLPAILNALETTNNGKRLVLEVAQHLGENTVRTIAMDATEGLVRGAAVSDTGGPITVPVGNATLGRILNVIGEPVDERGDVSKAEARAIHQPAPDFAAQSTESQILVTGIKVIDLLAPYSKGGKIGLFGGAGVGKTVLIMELINNIAKVHSGFSVFAGVGERTREG 187
BLAST of DY258549 vs. ExPASy Swiss-Prot
Match: ATPB_NITWN (ATP synthase subunit beta OS=Nitrobacter winogradskyi (strain Nb-255 / ATCC 25391) GN=atpD PE=3 SV=1) HSP 1 Score: 201.06 bits (510), Expect = 1.200e-50 Identity = 108/189 (57.14%), Postives = 129/189 (68.25%), Query Frame = 1 Query: 271 TGKGSIGQVCQVIGAVVDVRFDEGLPPILTALEVEDHSVRLVLEVAQHMGEGVVRTIAMDGTEGLVRGQRVLNTGSPITVPVGRVTLGRIMNDIGEPIDEKGDLKTEHYLPIHREAPAFVEQATEQQILVTGIKVDDLLGPYQKXXXXXXXXXXXERKIEPINETNKNVAKVRGVFLVFAGGGEPNREG 837 T +G++ QVIGAVVDV+F+ LP IL A+E ++ RLVLEVAQH+GE VRTIAMD TEGLVRGQ V +TG+PI VPVG TLGRIMN IGEP+DE+G +K + PIH EAP++ +Q+TE +ILVTGIKV DLL PY K K I E NVAK G + VFAG GE REG Sbjct: 3 TAANQVGRITQVIGAVVDVQFEGHLPAILNAIETKNGENRLVLEVAQHLGESTVRTIAMDTTEGLVRGQDVTDTGAPIRVPVGAGTLGRIMNVIGEPVDEQGPVKADDLRPIHAEAPSYTDQSTEAEILVTGIKVVDLLAPYAKGGKIGLFGGAGVGKTVLIQELINNVAKAHGGYSVFAGVGERTREG 191
BLAST of DY258549 vs. ExPASy Swiss-Prot
Match: ATPB_ZYMMO (ATP synthase subunit beta OS=Zymomonas mobilis GN=atpD PE=3 SV=1) HSP 1 Score: 199.904 bits (507), Expect = 2.673e-50 Identity = 111/216 (51.39%), Postives = 141/216 (65.28%), Query Frame = 1 Query: 271 TGKGSIGQVCQVIGAVVDVRFDEGLPPILTALEVEDHSVRLVLEVAQHMGEGVVRTIAMDGTEGLVRGQRVLNTGSPITVPVGRVTLGRIMNDIGEPIDEKGDLKTEHYLPIHREAPAFVEQATEQQILVTGIKVDDLLGPYQKXXXXXXXXXXXERKIEPINETNKNVAKVRGVFLVFAGGGEPNREGKMTCNGK*LKRGVISKGKRRLKIKRGT 918 + K +IG++ QVIG VVDV F+E LPP+LTALE ++ +VLEVAQH+GE VVRTI+MD T+GLVRGQ V++TGS I VPVG TLGRIMN +G P+DE+G + ++ +PIH +AP F EQ+T+ IL TGIKV DLL PY K K I E N+AK G F VFAG GE REG + + L+ GVI+ K I G+ Sbjct: 5 SSKKNIGRISQVIGPVVDVLFEEKLPPLLTALETKNQDATVVLEVAQHLGENVVRTISMDTTDGLVRGQEVVDTGSEIRVPVGPETLGRIMNVVGRPVDERGPIGSKQTMPIHADAPPFTEQSTDTAILTTGIKVIDLLAPYSKGGKVGLFGGAGVGKTVLIQELINNIAKGHGGFSVFAGVGERTREGNDLYH-EFLEAGVIASDKDGNAISEGS 219
BLAST of DY258549 vs. ExPASy Swiss-Prot
Match: ATPB_NEUCR (ATP synthase subunit beta, mitochondrial OS=Neurospora crassa GN=atp-2 PE=2 SV=1) HSP 1 Score: 199.904 bits (507), Expect = 2.673e-50 Identity = 105/184 (57.07%), Postives = 130/184 (70.65%), Query Frame = 1 Query: 289 GQVCQVIGAVVDVRFD-EGLPPILTALEVEDHSVRLVLEVAQHMGEGVVRTIAMDGTEGLVRGQRVLNTGSPITVPVGRVTLGRIMNDIGEPIDEKGDLKTEHYLPIHREAPAFVEQATEQQILVTGIKVDDLLGPYQKXXXXXXXXXXXERKIEPINETNKNVAKVRGVFLVFAGGGEPNREG 837 G++ QVIGAVVDV+FD + LPPIL ALE +++ +LVLEV+QH+GE VVR IAMDGTEGLVRG + +TG+PIT+PVG TLGRI+N G+PIDE+G +KT+ + PIH EAP FVEQ+T +ILVTGIKV DLL PY + K I E N+AK G + VF G GE REG Sbjct: 49 GKIYQVIGAVVDVKFDTDKLPPILNALETQNNGQKLVLEVSQHLGENVVRCIAMDGTEGLVRGAKASDTGAPITIPVGPATLGRIINVTGDPIDERGPIKTDKFRPIHAEAPEFVEQSTTAEILVTGIKVVDLLAPYARGGKIGLFGGAGVGKTVFIQELINNIAKAHGGYSVFTGVGERTREG 232
BLAST of DY258549 vs. ExPASy Swiss-Prot
Match: ATPB_RHOPA (ATP synthase subunit beta OS=Rhodopseudomonas palustris GN=atpD PE=3 SV=1) HSP 1 Score: 199.519 bits (506), Expect = 3.491e-50 Identity = 108/189 (57.14%), Postives = 130/189 (68.78%), Query Frame = 1 Query: 271 TGKGSIGQVCQVIGAVVDVRFDEGLPPILTALEVEDHSVRLVLEVAQHMGEGVVRTIAMDGTEGLVRGQRVLNTGSPITVPVGRVTLGRIMNDIGEPIDEKGDLKTEHYLPIHREAPAFVEQATEQQILVTGIKVDDLLGPYQKXXXXXXXXXXXERKIEPINETNKNVAKVRGVFLVFAGGGEPNREG 837 T G++ QVIGAVVDV+F+ LP IL A+E ++ RLVLEVAQH+GE VRTIAMD TEGLVRGQ V +TG+PI+VPVG TLGRIMN IGEP+DE+G +K+E IH+EAPA+ +Q+TE +ILVTGIKV DLL PY K K I E NVA+ G + VFAG GE REG Sbjct: 3 TPANQTGRITQVIGAVVDVQFEGHLPAILNAIETKNGDNRLVLEVAQHLGESTVRTIAMDTTEGLVRGQEVTDTGAPISVPVGAGTLGRIMNVIGEPVDEQGPIKSEGLRAIHQEAPAYTDQSTEAEILVTGIKVVDLLAPYAKGGKIGLFGGAGVGKTVLIQELINNVARAHGGYSVFAGVGERTREG 191
BLAST of DY258549 vs. ExPASy Swiss-Prot
Match: ATPB_PELUB (ATP synthase subunit beta OS=Pelagibacter ubique GN=atpD PE=3 SV=1) HSP 1 Score: 199.519 bits (506), Expect = 3.491e-50 Identity = 111/185 (60.00%), Postives = 127/185 (68.65%), Query Frame = 1 Query: 283 SIGQVCQVIGAVVDVRFDEGLPPILTALEVEDHSVRLVLEVAQHMGEGVVRTIAMDGTEGLVRGQRVLNTGSPITVPVGRVTLGRIMNDIGEPIDEKGDLKTEHYLPIHREAPAFVEQATEQQILVTGIKVDDLLGPYQKXXXXXXXXXXXERKIEPINETNKNVAKVRGVFLVFAGGGEPNREG 837 S G++ Q+IGAVVDV+FD LP IL+ALE ++ RLVLEVAQH+GE VRTIAMD TEGL RG V TG+PI VPVG TLGRI+N IGEPIDEKG++KT+ PIHR AP F +Q+TE +ILVTGIKV DLL PY K K I E NVAK G F VFAG GE REG Sbjct: 2 SKGKITQIIGAVVDVKFDGELPEILSALECKNGDNRLVLEVAQHLGESSVRTIAMDATEGLKRGDEVTATGAPIQVPVGPETLGRIINVIGEPIDEKGEVKTKEKWPIHRAAPEFSDQSTETEILVTGIKVVDLLAPYAKGGKIGLFGGAGVGKTVLIMELINNVAKAHGGFSVFAGVGERTREG 186
BLAST of DY258549 vs. ExPASy Swiss-Prot
Match: ATPB_ERYLH (ATP synthase subunit beta OS=Erythrobacter litoralis (strain HTCC2594) GN=atpD PE=3 SV=1) HSP 1 Score: 198.364 bits (503), Expect = 7.776e-50 Identity = 115/210 (54.76%), Postives = 136/210 (64.76%), Query Frame = 1 Query: 289 GQVCQVIGAVVDVRFDEGLPPILTALEVEDHSVRLVLEVAQHMGEGVVRTIAMDGTEGLVRGQRVLNTGSPITVPVGRVTLGRIMNDIGEPIDEKGDLKTEHYLPIHREAPAFVEQATEQQILVTGIKVDDLLGPYQKXXXXXXXXXXXERKIEPINETNKNVAKVRGVFLVFAGGGEPNREGKMTCNGK*LKRGVISKGKRRLKIKRGT 918 G + QVIGAVVDV+F LP ILTALE E+ LVLEVAQH+GE VRTIAMDGT+GLVRGQ V+NTG+ I+VPVG TLGRIMN +GEPID +G + + PIH EAPAFV+Q+T+ ILVTGIKV DLL PY K K I E N+AK G VFAG GE REG + + L GVI+K + I G+ Sbjct: 13 GTISQVIGAVVDVQFPGELPAILTALETENGDTTLVLEVAQHLGENTVRTIAMDGTDGLVRGQEVINTGAQISVPVGPKTLGRIMNVVGEPIDMRGPVGADKANPIHAEAPAFVDQSTDAAILVTGIKVIDLLAPYAKGGKIGLFGGAGVGKTVLIQELINNIAKGHGGVSVFAGVGERTREGNDLYH-EFLDAGVIAKNEAGEAISEGS 221
BLAST of DY258549 vs. ExPASy Swiss-Prot
Match: ATPB_RHOP5 (ATP synthase subunit beta OS=Rhodopseudomonas palustris (strain BisA53) GN=atpD PE=3 SV=1) HSP 1 Score: 197.978 bits (502), Expect = 1.016e-49 Identity = 108/183 (59.02%), Postives = 126/183 (68.85%), Query Frame = 1 Query: 289 GQVCQVIGAVVDVRFDEGLPPILTALEVEDHSVRLVLEVAQHMGEGVVRTIAMDGTEGLVRGQRVLNTGSPITVPVGRVTLGRIMNDIGEPIDEKGDLKTEHYLPIHREAPAFVEQATEQQILVTGIKVDDLLGPYQKXXXXXXXXXXXERKIEPINETNKNVAKVRGVFLVFAGGGEPNREG 837 G++ QVIGAVVDV+F+ LP IL A+E ++ + RLVLEVAQH+GE VRTIAMD TEGLVRGQ V +TGSPI VPVG TLGRIMN IGEP+DE+G + E PIH EAP + +Q+TE +ILVTGIKV DLL PY K K I E NVAK G + VFAG GE REG Sbjct: 9 GRITQVIGAVVDVQFEGHLPAILNAIETKNGNNRLVLEVAQHLGESTVRTIAMDTTEGLVRGQEVTDTGSPIMVPVGLGTLGRIMNVIGEPVDEQGPVANEGLRPIHAEAPLYTDQSTEAEILVTGIKVVDLLAPYAKGGKIGLFGGAGVGKTVLIQELINNVAKAHGGYSVFAGVGERTREG 191
BLAST of DY258549 vs. ExPASy Swiss-Prot
Match: ATPB1_BRASB (ATP synthase subunit beta 1 OS=Bradyrhizobium sp. (strain BTAi1 / ATCC BAA-1182) GN=atpD1 PE=3 SV=1) HSP 1 Score: 197.978 bits (502), Expect = 1.016e-49 Identity = 108/189 (57.14%), Postives = 128/189 (67.72%), Query Frame = 1 Query: 271 TGKGSIGQVCQVIGAVVDVRFDEGLPPILTALEVEDHSVRLVLEVAQHMGEGVVRTIAMDGTEGLVRGQRVLNTGSPITVPVGRVTLGRIMNDIGEPIDEKGDLKTEHYLPIHREAPAFVEQATEQQILVTGIKVDDLLGPYQKXXXXXXXXXXXERKIEPINETNKNVAKVRGVFLVFAGGGEPNREG 837 T IG++ QVIGAVVDV+F+ LP IL +LE ++ RLVLEVAQH+GE VRTIAMD TEGLVRGQ V +TG+PI VPVG TLGRI+N IGEPIDE G +K + IH+EAP++ +Q+TE +ILVTGIKV DLL PY K K I E NVAK G + VFAG GE REG Sbjct: 3 TAANQIGRITQVIGAVVDVQFEGHLPAILNSLETKNAGNRLVLEVAQHLGESTVRTIAMDTTEGLVRGQEVTDTGAPIRVPVGEGTLGRIINVIGEPIDEAGPVKADSLRAIHQEAPSYTDQSTEAEILVTGIKVVDLLAPYAKGGKIGLFGGAGVGKTVLIQELINNVAKAHGGYSVFAGVGERTREG 191
BLAST of DY258549 vs. ExPASy Swiss-Prot
Match: ATPB_RHOPS (ATP synthase subunit beta OS=Rhodopseudomonas palustris (strain BisB5) GN=atpD PE=3 SV=1) HSP 1 Score: 197.593 bits (501), Expect = 1.326e-49 Identity = 109/189 (57.67%), Postives = 126/189 (66.67%), Query Frame = 1 Query: 271 TGKGSIGQVCQVIGAVVDVRFDEGLPPILTALEVEDHSVRLVLEVAQHMGEGVVRTIAMDGTEGLVRGQRVLNTGSPITVPVGRVTLGRIMNDIGEPIDEKGDLKTEHYLPIHREAPAFVEQATEQQILVTGIKVDDLLGPYQKXXXXXXXXXXXERKIEPINETNKNVAKVRGVFLVFAGGGEPNREG 837 T G++ QVIGAVVDV+F+ LP IL A+E ++ RLVLEVAQH+GE VRTIAMD TEGLVRGQ V +TGSPI VPVG TLGRIMN IGEP+DE+G + E PIH EAP + +Q+TE +ILVTGIKV DLL PY K K I E NVAK G + VFAG GE REG Sbjct: 3 TPANQTGRITQVIGAVVDVQFEGHLPAILNAIETKNGDNRLVLEVAQHLGESTVRTIAMDTTEGLVRGQEVTDTGSPIMVPVGIGTLGRIMNVIGEPVDEQGPVANEGLRPIHAEAPLYTDQSTEAEILVTGIKVVDLLAPYAKGGKIGLFGGAGVGKTVLIQELINNVAKAHGGYSVFAGVGERTREG 191 The following BLAST results are available for this feature:
BLAST of DY258549 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >DY258549 ID=DY258549; Name=DY258549; organism=Citrus clementina; type=EST; length=1270bpback to top |