DY258549
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of DY258549 vs. ExPASy Swiss-Prot
Match: ATPB_OLICO (ATP synthase subunit beta OS=Oligotropha carboxidovorans (strain ATCC 49405 / DSM 1227 / OM5) GN=atpD PE=3 SV=1) HSP 1 Score: 197.593 bits (501), Expect = 1.326e-49 Identity = 107/184 (58.15%), Postives = 125/184 (67.93%), Query Frame = 1 Query: 286 IGQVCQVIGAVVDVRFDEGLPPILTALEVEDHSVRLVLEVAQHMGEGVVRTIAMDGTEGLVRGQRVLNTGSPITVPVGRVTLGRIMNDIGEPIDEKGDLKTEHYLPIHREAPAFVEQATEQQILVTGIKVDDLLGPYQKXXXXXXXXXXXERKIEPINETNKNVAKVRGVFLVFAGGGEPNREG 837 +G++ QVIGAVVDV+FD LP IL A+E + RLVLEVAQH+GE VR IAMD TEGLVRGQ V +TG+PI VPVG TLGRIMN +GEP+DE G +K + IH+EAPA+ EQ+TE +ILVTGIKV DLL PY K K I E NVAK G + VFAG GE REG Sbjct: 8 VGRITQVIGAVVDVQFDGYLPAILNAIETTNQGHRLVLEVAQHLGESTVRAIAMDTTEGLVRGQEVTDTGAPIKVPVGEGTLGRIMNVVGEPVDEGGPVKADGTRAIHQEAPAYTEQSTEAEILVTGIKVVDLLAPYAKGGKIGLFGGAGVGKTVLIQELINNVAKAHGGYSVFAGVGERTREG 191
BLAST of DY258549 vs. ExPASy Swiss-Prot
Match: ATPB_MESSB (ATP synthase subunit beta OS=Mesorhizobium sp. (strain BNC1) GN=atpD PE=3 SV=1) HSP 1 Score: 197.208 bits (500), Expect = 1.732e-49 Identity = 108/189 (57.14%), Postives = 125/189 (66.14%), Query Frame = 1 Query: 271 TGKGSIGQVCQVIGAVVDVRFDEGLPPILTALEVEDHSVRLVLEVAQHMGEGVVRTIAMDGTEGLVRGQRVLNTGSPITVPVGRVTLGRIMNDIGEPIDEKGDLKTEHYLPIHREAPAFVEQATEQQILVTGIKVDDLLGPYQKXXXXXXXXXXXERKIEPINETNKNVAKVRGVFLVFAGGGEPNREG 837 T G IG V QVIGAVVDV+F E LP IL ALE ++ RLVLEVAQH+GE VR IAMD T+GLVRGQ V +TG+PI+VPVG LGRI+N IGEP+DE G + + IH+ AP +VEQ+TE QILVTGIKV DLL PY + K I E NVAK G + VFAG GE REG Sbjct: 46 TASGKIGSVRQVIGAVVDVQFQENLPAILNALETDNQGNRLVLEVAQHLGENTVRCIAMDSTDGLVRGQEVRDTGAPISVPVGPEMLGRIINVIGEPVDEAGPITATEFRGIHQPAPEYVEQSTEAQILVTGIKVLDLLAPYARGGKIGLFGGAGVGKTVLIQELINNVAKAHGGYSVFAGVGERTREG 234
BLAST of DY258549 vs. ExPASy Swiss-Prot
Match: ATPB_BRAJA (ATP synthase subunit beta OS=Bradyrhizobium japonicum GN=atpD PE=3 SV=1) HSP 1 Score: 197.208 bits (500), Expect = 1.732e-49 Identity = 109/183 (59.56%), Postives = 126/183 (68.85%), Query Frame = 1 Query: 289 GQVCQVIGAVVDVRFDEGLPPILTALEVEDHSVRLVLEVAQHMGEGVVRTIAMDGTEGLVRGQRVLNTGSPITVPVGRVTLGRIMNDIGEPIDEKGDLKTEHYLPIHREAPAFVEQATEQQILVTGIKVDDLLGPYQKXXXXXXXXXXXERKIEPINETNKNVAKVRGVFLVFAGGGEPNREG 837 G+V QVIGAVVDV+F+ LP IL +LE ++ RLVLEVAQH+GE VRTIAMD TEGLVRGQ V +TGSPI VPVG TLGRI+N IGEPIDE G +K+E IH+EAP + +Q+TE +ILVTGIKV DLL PY K K I E NVAK G + VFAG GE REG Sbjct: 6 GRVTQVIGAVVDVQFEGHLPAILNSLETKNGGNRLVLEVAQHLGESTVRTIAMDTTEGLVRGQEVTDTGSPIRVPVGEGTLGRIINVIGEPIDEAGPVKSEGLRAIHQEAPTYTDQSTEAEILVTGIKVVDLLAPYAKGGKIGLFGGAGVGKTVLIQELINNVAKAHGGYSVFAGVGERTREG 188
BLAST of DY258549 vs. ExPASy Swiss-Prot
Match: ATPB_ROSDO (ATP synthase subunit beta OS=Roseobacter denitrificans (strain ATCC 33942 / OCh 114) GN=atpD PE=3 SV=1) HSP 1 Score: 196.823 bits (499), Expect = 2.263e-49 Identity = 105/185 (56.76%), Postives = 125/185 (67.57%), Query Frame = 1 Query: 283 SIGQVCQVIGAVVDVRFDEGLPPILTALEVEDHSVRLVLEVAQHMGEGVVRTIAMDGTEGLVRGQRVLNTGSPITVPVGRVTLGRIMNDIGEPIDEKGDLKTEHYLPIHREAPAFVEQATEQQILVTGIKVDDLLGPYQKXXXXXXXXXXXERKIEPINETNKNVAKVRGVFLVFAGGGEPNREG 837 ++G++ QVIGAVVDV+F + LP IL ALE ++ RLVLEVAQH+GE VR IAMD TEGLVRGQ V +T PI++PVG TLGRIMN +GEPIDEKG + T+ IH+EAPAF EQ+T ++L TGIKV DLL PY K K I E N+AKV F VFAG GE REG Sbjct: 4 AVGKITQVIGAVVDVQFADHLPEILNALETNNNGNRLVLEVAQHLGENTVRAIAMDATEGLVRGQTVTDTDGPISIPVGNATLGRIMNVVGEPIDEKGPVATDETRSIHQEAPAFAEQSTSSEVLETGIKVIDLLAPYAKGGKIGLFGGAGVGKTVLIMELINNIAKVHSGFSVFAGVGERTREG 188
BLAST of DY258549 vs. ExPASy Swiss-Prot
Match: ATPB_RHOPB (ATP synthase subunit beta OS=Rhodopseudomonas palustris (strain BisB18) GN=atpD PE=3 SV=1) HSP 1 Score: 196.823 bits (499), Expect = 2.263e-49 Identity = 108/189 (57.14%), Postives = 127/189 (67.20%), Query Frame = 1 Query: 271 TGKGSIGQVCQVIGAVVDVRFDEGLPPILTALEVEDHSVRLVLEVAQHMGEGVVRTIAMDGTEGLVRGQRVLNTGSPITVPVGRVTLGRIMNDIGEPIDEKGDLKTEHYLPIHREAPAFVEQATEQQILVTGIKVDDLLGPYQKXXXXXXXXXXXERKIEPINETNKNVAKVRGVFLVFAGGGEPNREG 837 T G++ QVIGAVVDV+F+ LP IL A+E ++ + RLVLEVAQH+GE VRTIAMD TEGLVRGQ V +TG+PI VPVG TLGRIMN IGEP+DE+G + E PIH EAP + +Q+TE +ILVTGIKV DLL PY K K I E NVAK G + VFAG GE REG Sbjct: 3 TPANQTGRITQVIGAVVDVQFEGHLPAILNAVETKNGNNRLVLEVAQHLGESTVRTIAMDTTEGLVRGQEVTDTGNPIMVPVGVGTLGRIMNVIGEPVDEQGPVANEGLRPIHAEAPTYTDQSTEAEILVTGIKVVDLLAPYAKGGKIGLFGGAGVGKTVLIQELINNVAKAHGGYSVFAGVGERTREG 191
BLAST of DY258549 vs. ExPASy Swiss-Prot
Match: ATPB_RHOP2 (ATP synthase subunit beta OS=Rhodopseudomonas palustris (strain HaA2) GN=atpD PE=3 SV=1) HSP 1 Score: 196.823 bits (499), Expect = 2.263e-49 Identity = 108/189 (57.14%), Postives = 126/189 (66.67%), Query Frame = 1 Query: 271 TGKGSIGQVCQVIGAVVDVRFDEGLPPILTALEVEDHSVRLVLEVAQHMGEGVVRTIAMDGTEGLVRGQRVLNTGSPITVPVGRVTLGRIMNDIGEPIDEKGDLKTEHYLPIHREAPAFVEQATEQQILVTGIKVDDLLGPYQKXXXXXXXXXXXERKIEPINETNKNVAKVRGVFLVFAGGGEPNREG 837 T G++ QVIGAVVDV+F+ LP IL A+E ++ RLVLEVAQH+GE VRTIAMD TEGLVRGQ V +TG+PI VPVG TLGRIMN IGEP+DE+G + E PIH EAP + +Q+TE +ILVTGIKV DLL PY K K I E NVAK G + VFAG GE REG Sbjct: 3 TPANQTGRITQVIGAVVDVQFEGHLPAILNAIETKNGDNRLVLEVAQHLGESTVRTIAMDTTEGLVRGQEVTDTGNPIMVPVGVGTLGRIMNVIGEPVDEQGPVANEGLRPIHAEAPTYTDQSTEAEILVTGIKVVDLLAPYAKGGKIGLFGGAGVGKTVLIQELINNVAKAHGGYSVFAGVGERTREG 191
BLAST of DY258549 vs. ExPASy Swiss-Prot
Match: ATPB_NOVAD (ATP synthase subunit beta OS=Novosphingobium aromaticivorans (strain DSM 12444) GN=atpD PE=3 SV=1) HSP 1 Score: 196.823 bits (499), Expect = 2.263e-49 Identity = 113/201 (56.22%), Postives = 133/201 (66.17%), Query Frame = 1 Query: 283 SIGQVCQVIGAVVDVRFDEGLPPILTALEVEDHSVRLVLEVAQHMGEGVVRTIAMDGTEGLVRGQRVLNTGSPITVPVGRVTLGRIMNDIGEPIDEKGDLKTEHYLPIHREAPAFVEQATEQQILVTGIKVDDLLGPYQKXXXXXXXXXXXERKIEPINETNKNVAKVRGVFLVFAGGGEPNREGKMTCNGK*LKRGVISK 885 S G++ QVIGAVVDV FD LP IL+ALE +++ RLVLEVAQH+GE VRTIAMD T+GL RGQ V NTG+ I+VPVG TLGRIMN IGEPIDE+G + E PIH +AP F+EQ+TE ILVTGIKV DLL PY + K I E N+AK G VFAG GE REG + + L GVI+K Sbjct: 7 STGKISQVIGAVVDVTFDGELPAILSALETDNNGNRLVLEVAQHLGENTVRTIAMDSTDGLTRGQPVTNTGAQISVPVGPKTLGRIMNVIGEPIDERGPVGAEQTAPIHAKAPEFIEQSTEAAILVTGIKVIDLLAPYARGGKIGLFGGAGVGKTVLIQELINNIAKGHGGVSVFAGVGERTREGNDLYH-EFLDAGVIAK 206
BLAST of DY258549 vs. ExPASy Swiss-Prot
Match: ATPB_BRASO (ATP synthase subunit beta OS=Bradyrhizobium sp. (strain ORS278) GN=atpD PE=3 SV=1) HSP 1 Score: 196.823 bits (499), Expect = 2.263e-49 Identity = 108/189 (57.14%), Postives = 127/189 (67.20%), Query Frame = 1 Query: 271 TGKGSIGQVCQVIGAVVDVRFDEGLPPILTALEVEDHSVRLVLEVAQHMGEGVVRTIAMDGTEGLVRGQRVLNTGSPITVPVGRVTLGRIMNDIGEPIDEKGDLKTEHYLPIHREAPAFVEQATEQQILVTGIKVDDLLGPYQKXXXXXXXXXXXERKIEPINETNKNVAKVRGVFLVFAGGGEPNREG 837 T IG+V QVIGAVVDV+F+ LP IL +LE ++ RLVLEVAQH+GE VR IAMD TEGLVRGQ V +TG+PI VPVG TLGRI+N IGEPIDE G +K ++ IH+EAP + +Q+TE +ILVTGIKV DLL PY K K I E NVAK G + VFAG GE REG Sbjct: 3 TAANQIGRVTQVIGAVVDVQFEGHLPAILNSLETKNGGNRLVLEVAQHLGESTVRAIAMDTTEGLVRGQEVTDTGAPIRVPVGEGTLGRIINVIGEPIDEAGPVKADNVRAIHQEAPTYTDQSTEAEILVTGIKVVDLLAPYAKGGKIGLFGGAGVGKTVLIQELINNVAKAHGGYSVFAGVGERTREG 191
BLAST of DY258549 vs. ExPASy Swiss-Prot
Match: ATPB_BARBK (ATP synthase subunit beta OS=Bartonella bacilliformis (strain ATCC 35685 / KC583) GN=atpD PE=3 SV=1) HSP 1 Score: 196.823 bits (499), Expect = 2.263e-49 Identity = 104/187 (55.61%), Postives = 128/187 (68.45%), Query Frame = 1 Query: 277 KGSIGQVCQVIGAVVDVRFDEGLPPILTALEVEDHSVRLVLEVAQHMGEGVVRTIAMDGTEGLVRGQRVLNTGSPITVPVGRVTLGRIMNDIGEPIDEKGDLKTEHYLPIHREAPAFVEQATEQQILVTGIKVDDLLGPYQKXXXXXXXXXXXERKIEPINETNKNVAKVRGVFLVFAGGGEPNREG 837 KG++G++ QVIGA+VDV+F+ LP IL ALE + RL+LEVAQH+GE VRTIAMD T+GLVRGQ+V +TG+ I VPVG TLGRIMN IGEP+DE G + T IH++AP ++EQ+TE +ILVTGIKV DLL PY K K I E N+AK G + VFAG GE REG Sbjct: 60 KGAVGEIKQVIGAIVDVQFEGALPNILNALETDRLGSRLILEVAQHLGENTVRTIAMDTTDGLVRGQKVFDTGTQICVPVGEATLGRIMNVIGEPVDEVGPIVTTKTRSIHQKAPEYIEQSTESEILVTGIKVVDLLAPYSKGGKVGLFGGAGVGKTVLIMELINNIAKAHGGYSVFAGVGERTREG 246
BLAST of DY258549 vs. ExPASy Swiss-Prot
Match: ATPB_PARL1 (ATP synthase subunit beta OS=Parvibaculum lavamentivorans (strain DS-1 / DSM 13023 / NCIMB 13966) GN=atpD PE=3 SV=1) HSP 1 Score: 196.438 bits (498), Expect = 2.955e-49 Identity = 107/185 (57.84%), Postives = 126/185 (68.11%), Query Frame = 1 Query: 283 SIGQVCQVIGAVVDVRFDEGLPPILTALEVEDHSVRLVLEVAQHMGEGVVRTIAMDGTEGLVRGQRVLNTGSPITVPVGRVTLGRIMNDIGEPIDEKGDLKTEHYLPIHREAPAFVEQATEQQILVTGIKVDDLLGPYQKXXXXXXXXXXXERKIEPINETNKNVAKVRGVFLVFAGGGEPNREG 837 ++G++ QVIGAVVDV F + LP IL ALE + RLVLEVAQH+GE VRTIAMD TEGL RGQ V +TG+ ITVPVG TLGRI+N IGEP+DE G +K E IH+EAP+FVEQ+TE Q+LVTGIKV DLL PY + K I E N+AK G + VFAG GE REG Sbjct: 4 AVGKIAQVIGAVVDVTFTDNLPAILNALETTNGGNRLVLEVAQHLGENTVRTIAMDTTEGLTRGQEVRDTGNAITVPVGEGTLGRIINVIGEPVDEAGPVKHEARREIHQEAPSFVEQSTEAQMLVTGIKVVDLLAPYARGGKIGLFGGAGVGKTVLIQELINNIAKAHGGYSVFAGVGERTREG 188 The following BLAST results are available for this feature:
BLAST of DY258549 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >DY258549 ID=DY258549; Name=DY258549; organism=Citrus clementina; type=EST; length=1270bpback to top |