DY258549
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of DY258549 vs. ExPASy Swiss-Prot
Match: ATPB_BART1 (ATP synthase subunit beta OS=Bartonella tribocorum (strain CIP 105476 / IBS 506) GN=atpD PE=3 SV=1) HSP 1 Score: 196.438 bits (498), Expect = 2.955e-49 Identity = 106/194 (54.64%), Postives = 131/194 (67.53%), Query Frame = 1 Query: 256 ITDEFTGKGSIGQVCQVIGAVVDVRFDEGLPPILTALEVEDHSVRLVLEVAQHMGEGVVRTIAMDGTEGLVRGQRVLNTGSPITVPVGRVTLGRIMNDIGEPIDEKGDLKTEHYLPIHREAPAFVEQATEQQILVTGIKVDDLLGPYQKXXXXXXXXXXXERKIEPINETNKNVAKVRGVFLVFAGGGEPNREG 837 + E KG++G++ QVIGAVVDV+F+ LP IL ALE E+ RLVLEVAQH+GE VRTIAMD T+GL+RGQ+V++TG+ I+VPVG TLGRIMN IGEP+D G + + IH+EAP +VEQ+T +ILVTGIKV DLL PY K K I E N+AK G + VFAG GE REG Sbjct: 58 VKKEERAKGTVGEIKQVIGAVVDVQFEGALPNILNALETENLGNRLVLEVAQHLGENTVRTIAMDTTDGLMRGQKVVDTGAQISVPVGEATLGRIMNVIGEPVDNVGPIASTKTRSIHQEAPEYVEQSTVSEILVTGIKVVDLLAPYSKGGKIGLFGGAGVGKTVLIMELINNIAKAHGGYSVFAGVGERTREG 251
BLAST of DY258549 vs. ExPASy Swiss-Prot
Match: ATPB_NITHX (ATP synthase subunit beta OS=Nitrobacter hamburgensis (strain X14 / DSM 10229) GN=atpD PE=3 SV=1) HSP 1 Score: 196.052 bits (497), Expect = 3.859e-49 Identity = 107/183 (58.47%), Postives = 126/183 (68.85%), Query Frame = 1 Query: 289 GQVCQVIGAVVDVRFDEGLPPILTALEVEDHSVRLVLEVAQHMGEGVVRTIAMDGTEGLVRGQRVLNTGSPITVPVGRVTLGRIMNDIGEPIDEKGDLKTEHYLPIHREAPAFVEQATEQQILVTGIKVDDLLGPYQKXXXXXXXXXXXERKIEPINETNKNVAKVRGVFLVFAGGGEPNREG 837 G++ QVIGAVVDV+F+ LP IL A+E ++ RLVLEVAQH+GE VRTIAMD TEGLVRGQ V +TG+PI VPVG TLGRIMN IGEP+DE+G +K E IH+EAP + +Q+TE +ILVTGIKV DLL PY K K I E NVAK G + VFAG GE REG Sbjct: 9 GRITQVIGAVVDVQFEGHLPAILNAIETKNGDNRLVLEVAQHLGESTVRTIAMDTTEGLVRGQEVKDTGNPILVPVGVGTLGRIMNVIGEPVDEQGPVKAEDMRAIHQEAPLYTDQSTEAEILVTGIKVVDLLAPYAKGGKIGLFGGAGVGKTVLIQELINNVAKAHGGYSVFAGVGERTREG 191
BLAST of DY258549 vs. ExPASy Swiss-Prot
Match: ATPB_SPHWW (ATP synthase subunit beta OS=Sphingomonas wittichii (strain RW1 / DSM 6014 / JCM 10273) GN=atpD PE=3 SV=1) HSP 1 Score: 195.667 bits (496), Expect = 5.040e-49 Identity = 112/201 (55.72%), Postives = 131/201 (65.17%), Query Frame = 1 Query: 283 SIGQVCQVIGAVVDVRFDEGLPPILTALEVEDHSVRLVLEVAQHMGEGVVRTIAMDGTEGLVRGQRVLNTGSPITVPVGRVTLGRIMNDIGEPIDEKGDLKTEHYLPIHREAPAFVEQATEQQILVTGIKVDDLLGPYQKXXXXXXXXXXXERKIEPINETNKNVAKVRGVFLVFAGGGEPNREGKMTCNGK*LKRGVISK 885 ++G++ QVIGAVVDV FD LP IL ALE ++ RLVLEVAQH+GEG VRTIAMD T+GL RGQ V +TGS I VPVG TLGRI+N IGEPIDE+G + PIH EAP FV+Q+T+ ILVTGIKV DLL PY K K I E N+AK G VFAG GE REG + + L GVI+K Sbjct: 9 NVGRISQVIGAVVDVSFDGSLPAILNALETTNNGNRLVLEVAQHLGEGTVRTIAMDATDGLTRGQEVTDTGSQIRVPVGPQTLGRILNVIGEPIDERGPVNATQTSPIHAEAPLFVDQSTDASILVTGIKVIDLLAPYAKGGKIGLFGGAGVGKTVLIQELINNIAKGHGGTSVFAGVGERTREGNDLYH-EFLDAGVIAK 208
BLAST of DY258549 vs. ExPASy Swiss-Prot
Match: ATPB_SILPO (ATP synthase subunit beta OS=Silicibacter pomeroyi GN=atpD PE=3 SV=1) HSP 1 Score: 195.667 bits (496), Expect = 5.040e-49 Identity = 106/183 (57.92%), Postives = 123/183 (67.21%), Query Frame = 1 Query: 289 GQVCQVIGAVVDVRFDEGLPPILTALEVEDHSVRLVLEVAQHMGEGVVRTIAMDGTEGLVRGQRVLNTGSPITVPVGRVTLGRIMNDIGEPIDEKGDLKTEHYLPIHREAPAFVEQATEQQILVTGIKVDDLLGPYQKXXXXXXXXXXXERKIEPINETNKNVAKVRGVFLVFAGGGEPNREG 837 G+V Q+IGAVVDV+FD+ LP IL ALE E++ RLVLEVAQH+GE VRTIAMD TEGLVRG V +TG PI+VPVG TLGRI+N IGEP+DEKG + IH+ AP+F EQ+T ILVTGIKV DLL PY K K I E N+AKV + VFAG GE REG Sbjct: 6 GKVTQIIGAVVDVQFDDALPEILNALETENNGKRLVLEVAQHLGENTVRTIAMDATEGLVRGAVVTDTGGPISVPVGAATLGRILNVIGEPVDEKGPVNATETRAIHQPAPSFDEQSTSSDILVTGIKVIDLLAPYSKGGKIGLFGGAGVGKTVLIMELINNIAKVHSGYSVFAGVGERTREG 188
BLAST of DY258549 vs. ExPASy Swiss-Prot
Match: ATPB2_DINSH (ATP synthase subunit beta 2 OS=Dinoroseobacter shibae (strain DFL 12) GN=atpD2 PE=3 SV=1) HSP 1 Score: 195.282 bits (495), Expect = 6.583e-49 Identity = 106/183 (57.92%), Postives = 123/183 (67.21%), Query Frame = 1 Query: 289 GQVCQVIGAVVDVRFDEGLPPILTALEVEDHSVRLVLEVAQHMGEGVVRTIAMDGTEGLVRGQRVLNTGSPITVPVGRVTLGRIMNDIGEPIDEKGDLKTEHYLPIHREAPAFVEQATEQQILVTGIKVDDLLGPYQKXXXXXXXXXXXERKIEPINETNKNVAKVRGVFLVFAGGGEPNREG 837 G+V QVIGAVVDV+F++ LP IL AL E++ +LVLEVAQH+GE VRTIAMD TEGLVRG V +TG PIT+PVG TLGRIMN IGEPIDEKG ++ IH+ AP F EQ+T +ILVTGIKV DLL PY K K I E N+AKV + VFAG GE REG Sbjct: 6 GKVTQVIGAVVDVQFEDTLPEILNALNTENNGKKLVLEVAQHLGENTVRTIAMDATEGLVRGAEVTDTGGPITIPVGNATLGRIMNVIGEPIDEKGPVEASESRAIHQPAPEFSEQSTGSEILVTGIKVIDLLAPYSKGGKIGLFGGAGVGKTVLIMELINNIAKVHSGYSVFAGVGERTREG 188
BLAST of DY258549 vs. ExPASy Swiss-Prot
Match: ATPB_JANSC (ATP synthase subunit beta OS=Jannaschia sp. (strain CCS1) GN=atpD PE=3 SV=1) HSP 1 Score: 194.512 bits (493), Expect = 1.123e-48 Identity = 104/185 (56.22%), Postives = 126/185 (68.11%), Query Frame = 1 Query: 283 SIGQVCQVIGAVVDVRFDEGLPPILTALEVEDHSVRLVLEVAQHMGEGVVRTIAMDGTEGLVRGQRVLNTGSPITVPVGRVTLGRIMNDIGEPIDEKGDLKTEHYLPIHREAPAFVEQATEQQILVTGIKVDDLLGPYQKXXXXXXXXXXXERKIEPINETNKNVAKVRGVFLVFAGGGEPNREG 837 ++G++ QVIGAVVDV+F++ LP IL ALE E+ RLVLEVAQH+GEG VRTIAMD +EGLVRGQ V +T PITVPVG TLGRI+N +GEP+DE G + E IH++AP F +Q+TE ++LVTGIKV DLL PY K K I E N+AKV VFAG GE REG Sbjct: 4 AVGKITQVIGAVVDVQFNDHLPEILNALETENDGKRLVLEVAQHLGEGTVRTIAMDSSEGLVRGQEVTDTDGPITVPVGPGTLGRILNVVGEPVDEGGPVDAEERRGIHQDAPEFADQSTEAEVLVTGIKVVDLLAPYSKGGKIGLFGGAGVGKTVLIMELINNIAKVHSGVSVFAGVGERTREG 188
BLAST of DY258549 vs. ExPASy Swiss-Prot
Match: ATPB_RHOS5 (ATP synthase subunit beta OS=Rhodobacter sphaeroides (strain ATCC 17025 / ATH 2.4.3) GN=atpD PE=3 SV=1) HSP 1 Score: 193.741 bits (491), Expect = 1.915e-48 Identity = 108/185 (58.38%), Postives = 123/185 (66.49%), Query Frame = 1 Query: 283 SIGQVCQVIGAVVDVRFDEGLPPILTALEVEDHSVRLVLEVAQHMGEGVVRTIAMDGTEGLVRGQRVLNTGSPITVPVGRVTLGRIMNDIGEPIDEKGDLKTEHYLPIHREAPAFVEQATEQQILVTGIKVDDLLGPYQKXXXXXXXXXXXERKIEPINETNKNVAKVRGVFLVFAGGGEPNREG 837 S G+V QVIGAVVDV+FD GLP IL ALE ++ RLVLEVAQH+GE VRTIAMD TEGLVRG V + G PI+VPVG TLGRI+N IGEPIDEKG + + IH+ AP F EQ+T +ILVTGIKV DLL PY K K I E N+AKV + VFAG GE REG Sbjct: 5 SQGKVTQVIGAVVDVQFDGGLPAILNALETVNNDKRLVLEVAQHLGENTVRTIAMDATEGLVRGAPVTDLGGPISVPVGDATLGRILNVIGEPIDEKGPVSGDSTRAIHQPAPTFAEQSTTSEILVTGIKVIDLLAPYSKGGKIGLFGGAGVGKTVLIMELINNIAKVHSGYSVFAGVGERTREG 189
BLAST of DY258549 vs. ExPASy Swiss-Prot
Match: ATPB_YEAST (ATP synthase subunit beta, mitochondrial OS=Saccharomyces cerevisiae GN=ATP2 PE=1 SV=2) HSP 1 Score: 192.971 bits (489), Expect = 3.267e-48 Identity = 104/184 (56.52%), Postives = 127/184 (69.02%), Query Frame = 1 Query: 289 GQVCQVIGAVVDVRFDEG-LPPILTALEVEDHSVRLVLEVAQHMGEGVVRTIAMDGTEGLVRGQRVLNTGSPITVPVGRVTLGRIMNDIGEPIDEKGDLKTEHYLPIHREAPAFVEQATEQQILVTGIKVDDLLGPYQKXXXXXXXXXXXERKIEPINETNKNVAKVRGVFLVFAGGGEPNREG 837 G+V VIGA+VDV F++ LP IL ALE++ +LVLEVAQH+GE VRTIAMDGTEGLVRG++VL+TG PI+VPVGR TLGRI+N IGEPIDE+G +K++ PIH + P+F EQ+T +IL TGIKV DLL PY + K I E N+AK G F VF G GE REG Sbjct: 44 GKVTAVIGAIVDVHFEQSELPAILNALEIKTPQGKLVLEVAQHLGENTVRTIAMDGTEGLVRGEKVLDTGGPISVPVGRETLGRIINVIGEPIDERGPIKSKLRKPIHADPPSFAEQSTSAEILETGIKVVDLLAPYARGGKIGLFGGAGVGKTVFIQELINNIAKAHGGFSVFTGVGERTREG 227
BLAST of DY258549 vs. ExPASy Swiss-Prot
Match: ATPB_XANP2 (ATP synthase subunit beta OS=Xanthobacter autotrophicus (strain ATCC BAA-1158 / Py2) GN=atpD PE=3 SV=1) HSP 1 Score: 192.971 bits (489), Expect = 3.267e-48 Identity = 107/184 (58.15%), Postives = 123/184 (66.85%), Query Frame = 1 Query: 286 IGQVCQVIGAVVDVRFDEGLPPILTALEVEDHSVRLVLEVAQHMGEGVVRTIAMDGTEGLVRGQRVLNTGSPITVPVGRVTLGRIMNDIGEPIDEKGDLKTEHYLPIHREAPAFVEQATEQQILVTGIKVDDLLGPYQKXXXXXXXXXXXERKIEPINETNKNVAKVRGVFLVFAGGGEPNREG 837 +G++ QVIGAVVDV+FD LP IL ALE + RLVLEVAQH+GE VR IAMD TEGLVRG V +TG+PI VPVG TLGRIMN IGEP+DE G ++ E IH+ AP++ EQATE +ILVTGIKV DLL PY K K I E NVAK G + VFAG GE REG Sbjct: 5 VGRITQVIGAVVDVQFDGHLPEILNALETTNQGNRLVLEVAQHLGESTVRCIAMDATEGLVRGLEVTDTGAPIQVPVGAGTLGRIMNVIGEPVDELGPIEAEATRGIHQPAPSYAEQATEAEILVTGIKVVDLLAPYAKGGKVGLFGGAGVGKTVLIMELINNVAKAHGGYSVFAGVGERTREG 188
BLAST of DY258549 vs. ExPASy Swiss-Prot
Match: ATPB_MAGSA (ATP synthase subunit beta OS=Magnetospirillum magneticum (strain AMB-1 / ATCC 700264) GN=atpD PE=3 SV=1) HSP 1 Score: 191.815 bits (486), Expect = 7.278e-48 Identity = 103/185 (55.68%), Postives = 126/185 (68.11%), Query Frame = 1 Query: 283 SIGQVCQVIGAVVDVRFDEGLPPILTALEVEDHSVRLVLEVAQHMGEGVVRTIAMDGTEGLVRGQRVLNTGSPITVPVGRVTLGRIMNDIGEPIDEKGDLKTEHYLPIHREAPAFVEQATEQQILVTGIKVDDLLGPYQKXXXXXXXXXXXERKIEPINETNKNVAKVRGVFLVFAGGGEPNREG 837 ++G + QV+GAVVDVRFD LP IL+AL +E +LVLEVAQH+GE VRTIAMD T+GL RG V++TG+ I +PVG TLGRI+N IGEPIDE+G + + LPIH +AP FV+Q+TE +ILVTGIKV DLL PY K K I E N+AK G + VFAG GE REG Sbjct: 5 NVGTITQVLGAVVDVRFDGQLPAILSALHLEHQGKKLVLEVAQHLGESTVRTIAMDSTDGLTRGTEVVDTGAAIQMPVGPETLGRIINVIGEPIDERGPIGNKTTLPIHADAPEFVDQSTETEILVTGIKVIDLLAPYCKGGKIGLCGGAGVGKTVLIMELINNIAKAHGGYSVFAGVGERTREG 189 The following BLAST results are available for this feature:
BLAST of DY258549 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >DY258549 ID=DY258549; Name=DY258549; organism=Citrus clementina; type=EST; length=1270bpback to top |