DY258549
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of DY258549 vs. ExPASy Swiss-Prot
Match: ATPB_RHILO (ATP synthase subunit beta OS=Rhizobium loti GN=atpD PE=3 SV=1) HSP 1 Score: 191.43 bits (485), Expect = 9.506e-48 Identity = 106/186 (56.99%), Postives = 124/186 (66.67%), Query Frame = 1 Query: 280 GSIGQVCQVIGAVVDVRFDEGLPPILTALEVEDHSVRLVLEVAQHMGEGVVRTIAMDGTEGLVRGQRVLNTGSPITVPVGRVTLGRIMNDIGEPIDEKGDLKTEHYLPIHREAPAFVEQATEQQILVTGIKVDDLLGPYQKXXXXXXXXXXXERKIEPINETNKNVAKVRGVFLVFAGGGEPNREG 837 G +G+V QVIGAVVDV+F + LP IL ALE + RLVLEVAQH+GE VR IAMD TEGLVRGQ V +TG+PITVPVG LGRI+N IGEP+DE+G + IH+ AP +VEQ+TE QIL+TGIKV DLL PY K K I E N+AK G + VFAG GE REG Sbjct: 7 GVVGKVRQVIGAVVDVQFGDHLPAILNALETTNVGNRLVLEVAQHLGENTVRCIAMDSTEGLVRGQEVRDTGAPITVPVGPGMLGRIINVIGEPVDEEGPVDAIEMRSIHQPAPTYVEQSTEAQILITGIKVLDLLAPYAKGGKIGLFGGAGVGKTVLIQELINNIAKAHGGYSVFAGVGERTREG 192
BLAST of DY258549 vs. ExPASy Swiss-Prot
Match: ATPB_KLULA (ATP synthase subunit beta, mitochondrial OS=Kluyveromyces lactis GN=ATP2 PE=3 SV=2) HSP 1 Score: 191.43 bits (485), Expect = 9.506e-48 Identity = 104/186 (55.91%), Postives = 128/186 (68.82%), Query Frame = 1 Query: 283 SIGQVCQVIGAVVDVRFDEG-LPPILTALEVEDHSVRLVLEVAQHMGEGVVRTIAMDGTEGLVRGQRVLNTGSPITVPVGRVTLGRIMNDIGEPIDEKGDLKTEHYLPIHREAPAFVEQATEQQILVTGIKVDDLLGPYQKXXXXXXXXXXXERKIEPINETNKNVAKVRGVFLVFAGGGEPNREG 837 S G+V VIGA+VDV+F++G LP IL ALE++ +LVLEVAQH+GE VRTIAMDGTEGLVRG+ V +TG+PI+VPVGR TLGRI+N IGEPIDE+G + ++ PIH + P FVEQ+T ++L TGIKV DLL PY + K I E N+AK G F VF G GE REG Sbjct: 36 SQGKVRAVIGAIVDVQFEQGQLPAILNALEIDTPEGKLVLEVAQHLGENTVRTIAMDGTEGLVRGENVSDTGAPISVPVGRETLGRIINVIGEPIDERGPINSKMRKPIHADPPLFVEQSTAAEVLETGIKVVDLLAPYARGGKIGLFGGAGVGKTVFIQELINNIAKAHGGFSVFTGVGERTREG 221
BLAST of DY258549 vs. ExPASy Swiss-Prot
Match: ATPB_BARHE (ATP synthase subunit beta OS=Bartonella henselae GN=atpD PE=3 SV=1) HSP 1 Score: 191.43 bits (485), Expect = 9.506e-48 Identity = 104/187 (55.61%), Postives = 126/187 (67.38%), Query Frame = 1 Query: 277 KGSIGQVCQVIGAVVDVRFDEGLPPILTALEVEDHSVRLVLEVAQHMGEGVVRTIAMDGTEGLVRGQRVLNTGSPITVPVGRVTLGRIMNDIGEPIDEKGDLKTEHYLPIHREAPAFVEQATEQQILVTGIKVDDLLGPYQKXXXXXXXXXXXERKIEPINETNKNVAKVRGVFLVFAGGGEPNREG 837 + ++G + QVIGAVVDV+F+ LP IL ALE ++ RLVLEVAQH+GE VRTIAMD T+GLVRGQ+V +TG+ I+VPVG TLGRIMN IGEP+D G + T IH+EAP +VEQ+T +ILVTGIKV DLL PY K K I E N+AK G + VFAG GE REG Sbjct: 54 EAAVGVIKQVIGAVVDVQFEGPLPNILNALETDNLGNRLVLEVAQHLGENTVRTIAMDTTDGLVRGQKVFDTGTQISVPVGEATLGRIMNVIGEPVDNVGPIATSKTRSIHQEAPEYVEQSTASEILVTGIKVVDLLAPYSKGGKVGLFGGAGVGKTVLIMELINNIAKAHGGYSVFAGVGERTREG 240
BLAST of DY258549 vs. ExPASy Swiss-Prot
Match: ATPB_AZOC5 (ATP synthase subunit beta OS=Azorhizobium caulinodans (strain ATCC 43989 / DSM 5975 / ORS 571) GN=atpD PE=3 SV=1) HSP 1 Score: 190.66 bits (483), Expect = 1.621e-47 Identity = 105/183 (57.38%), Postives = 122/183 (66.67%), Query Frame = 1 Query: 289 GQVCQVIGAVVDVRFDEGLPPILTALEVEDHSVRLVLEVAQHMGEGVVRTIAMDGTEGLVRGQRVLNTGSPITVPVGRVTLGRIMNDIGEPIDEKGDLKTEHYLPIHREAPAFVEQATEQQILVTGIKVDDLLGPYQKXXXXXXXXXXXERKIEPINETNKNVAKVRGVFLVFAGGGEPNREG 837 G++ QVIGAVVDV+FD LP IL ALE + RLVLEVAQH+GE VRTIAMD TEGLVRGQ V +TG PI VPVG TLGRIMN IGE +DE G + E IH++AP++ EQ+TE ++LVTGIKV DLL PY K K I E N+AK G + VFAG GE REG Sbjct: 6 GRITQVIGAVVDVQFDSHLPEILNALETTNQGNRLVLEVAQHLGENTVRTIAMDSTEGLVRGQAVEDTGGPIMVPVGEATLGRIMNVIGEAVDELGPVVGEAKRAIHQQAPSYSEQSTEAEMLVTGIKVVDLLAPYSKGGKIGLFGGAGVGKTVLIMELINNIAKAHGGYSVFAGVGERTREG 188
BLAST of DY258549 vs. ExPASy Swiss-Prot
Match: ATPB_BARQU (ATP synthase subunit beta OS=Bartonella quintana GN=atpD PE=3 SV=1) HSP 1 Score: 190.274 bits (482), Expect = 2.118e-47 Identity = 103/187 (55.08%), Postives = 125/187 (66.84%), Query Frame = 1 Query: 277 KGSIGQVCQVIGAVVDVRFDEGLPPILTALEVEDHSVRLVLEVAQHMGEGVVRTIAMDGTEGLVRGQRVLNTGSPITVPVGRVTLGRIMNDIGEPIDEKGDLKTEHYLPIHREAPAFVEQATEQQILVTGIKVDDLLGPYQKXXXXXXXXXXXERKIEPINETNKNVAKVRGVFLVFAGGGEPNREG 837 KG++G++ QVIGAVVDV+F+ LP IL ALE E+ RLVLEVAQH+GE VRTIAMD T+GL RGQ+V +T + I VPVG TLGRIMN IGEP+D G + T IH++AP +V+Q+T +ILVTGIKV DLL PY K K I E N+AK G + VFAG GE REG Sbjct: 59 KGAVGEIKQVIGAVVDVQFEGALPNILNALETENLGNRLVLEVAQHLGENTVRTIAMDTTDGLTRGQKVFDTETQICVPVGEATLGRIMNVIGEPVDNVGPIATTKTRSIHQKAPEYVDQSTASEILVTGIKVVDLLAPYSKGGKVGLFGGAGVGKTVLIMELINNIAKAHGGYSVFAGVGERTREG 245
BLAST of DY258549 vs. ExPASy Swiss-Prot
Match: ATPB_SPHAL (ATP synthase subunit beta OS=Sphingopyxis alaskensis GN=atpD PE=3 SV=1) HSP 1 Score: 189.504 bits (480), Expect = 3.612e-47 Identity = 108/199 (54.27%), Postives = 132/199 (66.33%), Query Frame = 1 Query: 289 GQVCQVIGAVVDVRFDEGLPPILTALEVEDHSVRLVLEVAQHMGEGVVRTIAMDGTEGLVRGQRVLNTGSPITVPVGRVTLGRIMNDIGEPIDEKGDLKTEHYLPIHREAPAFVEQATEQQILVTGIKVDDLLGPYQKXXXXXXXXXXXERKIEPINETNKNVAKVRGVFLVFAGGGEPNREGKMTCNGK*LKRGVISK 885 G++ QVIGAVVDV+F LP IL ALE +++ RLVLEVAQH+GE VRTIAMD T+GL RGQ V +TG+ I+VPVG TLGRI+N IGEPIDE+G + ++ PIH +AP FV+Q+TE ILVTGIKV DL+ PY K K I E N+AK G VFAG GE REG + + L GVI+K Sbjct: 41 GRIAQVIGAVVDVQFTGELPAILNALETDNNGNRLVLEVAQHLGENTVRTIAMDATDGLTRGQPVRDTGAQISVPVGPQTLGRILNVIGEPIDERGPVNSDMTAPIHAKAPEFVDQSTEASILVTGIKVIDLIAPYAKGGKIGLFGGAGVGKTVLIQELINNIAKGHGGVSVFAGVGERTREGNDLYH-EFLDAGVIAK 238
BLAST of DY258549 vs. ExPASy Swiss-Prot
Match: ATPB_PARDP (ATP synthase subunit beta OS=Paracoccus denitrificans (strain Pd 1222) GN=atpD PE=3 SV=1) HSP 1 Score: 189.504 bits (480), Expect = 3.612e-47 Identity = 104/183 (56.83%), Postives = 121/183 (66.12%), Query Frame = 1 Query: 289 GQVCQVIGAVVDVRFDEGLPPILTALEVEDHSVRLVLEVAQHMGEGVVRTIAMDGTEGLVRGQRVLNTGSPITVPVGRVTLGRIMNDIGEPIDEKGDLKTEHYLPIHREAPAFVEQATEQQILVTGIKVDDLLGPYQKXXXXXXXXXXXERKIEPINETNKNVAKVRGVFLVFAGGGEPNREG 837 G++ QVIGAVVDV+FD LP IL ALE E++ RLVLEVAQH+GE VRTIAMD TEGLVRG V +TG PI VPVG TLGRI+N +GEP+DE G ++ IH++AP F QAT +ILVTGIKV DLL PY K K I E N+AKV + VFAG GE REG Sbjct: 6 GKITQVIGAVVDVQFDGQLPAILNALETENNGKRLVLEVAQHLGENTVRTIAMDATEGLVRGLPVKDTGGPIMVPVGDATLGRILNVVGEPVDEGGPVEATQTRAIHQQAPDFAAQATASEILVTGIKVIDLLAPYSKGGKIGLFGGAGVGKTVLIMELINNIAKVHSGYSVFAGVGERTREG 188
BLAST of DY258549 vs. ExPASy Swiss-Prot
Match: ATPB_SCHPO (ATP synthase subunit beta, mitochondrial OS=Schizosaccharomyces pombe GN=atp2 PE=1 SV=1) HSP 1 Score: 188.734 bits (478), Expect = 6.161e-47 Identity = 106/190 (55.79%), Postives = 128/190 (67.37%), Query Frame = 1 Query: 277 KGSIGQVCQVIGAVVDVRFDEG--LPPILTALEVE-DHSVRLVLEVAQHMGEGVVRTIAMDGTEGLVRGQRVLNTGSPITVPVGRVTLGRIMNDIGEPIDEKGDLKTEHYLPIHREAPAFVEQATEQQILVTGIKVDDLLGPYQKXXXXXXXXXXXERKIEPINETNKNVAKVRGVFLVFAGGGEPNREG 837 K + G + QVIGAVVD +F++ LP IL ALEV+ + RLVLEVAQH+GE VRTIAMDGTEGLVRG V++TGSPI++PVG TLGRIMN IGEP+DE+G +K Y PIH +AP+F EQ+T +IL TGIKV DLL PY + K I E N+AK G + VF G GE REG Sbjct: 51 KHNKGSIKQVIGAVVDCQFEDADSLPSILNALEVKLPDNKRLVLEVAQHVGENTVRTIAMDGTEGLVRGTAVIDTGSPISIPVGPGTLGRIMNVIGEPVDERGPIKAVKYSPIHADAPSFEEQSTTPEILETGIKVVDLLAPYARGGKIGLFGGAGVGKTVFIQELINNIAKAHGGYSVFTGVGERTREG 240
BLAST of DY258549 vs. ExPASy Swiss-Prot
Match: ATPB_MAGSM (ATP synthase subunit beta OS=Magnetococcus sp. (strain MC-1) GN=atpD PE=3 SV=1) HSP 1 Score: 187.193 bits (474), Expect = 1.793e-46 Identity = 104/183 (56.83%), Postives = 120/183 (65.57%), Query Frame = 1 Query: 289 GQVCQVIGAVVDVRFDEGLPPILTALEVEDHSVRLVLEVAQHMGEGVVRTIAMDGTEGLVRGQRVLNTGSPITVPVGRVTLGRIMNDIGEPIDEKGDLKTEHYLPIHREAPAFVEQATEQQILVTGIKVDDLLGPYQKXXXXXXXXXXXERKIEPINETNKNVAKVRGVFLVFAGGGEPNREG 837 G+V QV+G VVDVRF+ LP IL AL + + RLVLEVA HMGEG VR IAMD T+G+VRG V +TG I VPVGR TLGRI+N +GEP DEKG ++T LPIHR APAF +QAT +IL TGIKV DLL PY K K I E NVA+ G + VFAG GE REG Sbjct: 7 GKVVQVVGPVVDVRFEGELPNILNALHMVRNGERLVLEVATHMGEGTVRAIAMDSTDGVVRGMEVTDTGDTIRVPVGRQTLGRILNVVGEPQDEKGPVETTETLPIHRPAPAFAQQATSAEILETGIKVIDLLAPYAKGGKVGLFGGAGVGKTVLIMELINNVAQEHGGYSVFAGVGERTREG 189
BLAST of DY258549 vs. ExPASy Swiss-Prot
Match: ATPB_RHOBL (ATP synthase subunit beta OS=Rhodopseudomonas blastica GN=atpD PE=3 SV=1) HSP 1 Score: 186.808 bits (473), Expect = 2.341e-46 Identity = 102/185 (55.14%), Postives = 123/185 (66.49%), Query Frame = 1 Query: 283 SIGQVCQVIGAVVDVRFDEGLPPILTALEVEDHSVRLVLEVAQHMGEGVVRTIAMDGTEGLVRGQRVLNTGSPITVPVGRVTLGRIMNDIGEPIDEKGDLKTEHYLPIHREAPAFVEQATEQQILVTGIKVDDLLGPYQKXXXXXXXXXXXERKIEPINETNKNVAKVRGVFLVFAGGGEPNREG 837 S G+V QVIGAVVDV+F+ LP IL ALE ++ +L+LEVAQH+GE VR IAMD TEGLVRG V ++G+PI+VPVG TLGRI+N +GEPIDE+G + IH++AP F Q+TE QILVTGIKV DLL PY K K I E N+AKV + VFAG GE REG Sbjct: 8 SKGKVTQVIGAVVDVQFEGVLPAILNALETTNNGKKLILEVAQHLGENTVRCIAMDATEGLVRGAPVSDSGTPISVPVGNATLGRILNVVGEPIDERGPIAATEKRAIHQKAPDFQSQSTESQILVTGIKVIDLLAPYSKGGKIGLFGGAGVGKTVLIQELINNIAKVHSGYSVFAGVGERTREG 192 The following BLAST results are available for this feature:
BLAST of DY258549 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >DY258549 ID=DY258549; Name=DY258549; organism=Citrus clementina; type=EST; length=1270bpback to top |