DY258549
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of DY258549 vs. ExPASy Swiss-Prot
Match: ATPB_GEOSL (ATP synthase subunit beta OS=Geobacter sulfurreducens GN=atpD PE=3 SV=1) HSP 1 Score: 186.808 bits (473), Expect = 2.341e-46 Identity = 105/191 (54.97%), Postives = 124/191 (64.92%), Query Frame = 1 Query: 283 SIGQVCQVIGAVVDVRFDEG-LPPILTALEV-----EDHSVRLVLEVAQHMGEGVVRTIAMDGTEGLVRGQRVLNTGSPITVPVGRVTLGRIMNDIGEPIDEKGDLKTEHYLPIHREAPAFVEQATEQQILVTGIKVDDLLGPYQKXXXXXXXXXXXERKIEPINETNKNVAKVRGVFLVFAGGGEPNREG 837 + G++ QVIGAV+DV F+ G LPPI AL V +D LVLEVAQH+GE VRTIAMD T+GLVRGQ VL+TG I+VPVGR TLGRI+N IGEP+DE G + E IHREAPAFV+Q+T+ + TGIKV DLL PY + K I E N+AK G F VFAG GE REG Sbjct: 4 NFGKISQVIGAVIDVEFEPGKLPPIYNALRVTNPAIDDKEYNLVLEVAQHLGENAVRTIAMDSTDGLVRGQAVLDTGKQISVPVGRKTLGRILNVIGEPVDEMGPVNAEKEYGIHREAPAFVDQSTKVEAFTTGIKVVDLLAPYARGGKIGLFGGAGVGKTVLIMELINNIAKQHGGFSVFAGVGERTREG 194
BLAST of DY258549 vs. ExPASy Swiss-Prot
Match: ATPB_SILST (ATP synthase subunit beta OS=Silicibacter sp. (strain TM1040) GN=atpD PE=3 SV=1) HSP 1 Score: 186.037 bits (471), Expect = 3.994e-46 Identity = 99/183 (54.10%), Postives = 123/183 (67.21%), Query Frame = 1 Query: 289 GQVCQVIGAVVDVRFDEGLPPILTALEVEDHSVRLVLEVAQHMGEGVVRTIAMDGTEGLVRGQRVLNTGSPITVPVGRVTLGRIMNDIGEPIDEKGDLKTEHYLPIHREAPAFVEQATEQQILVTGIKVDDLLGPYQKXXXXXXXXXXXERKIEPINETNKNVAKVRGVFLVFAGGGEPNREG 837 G+V Q+IGAVVDV+FD LP IL AL +++ +LVLEVAQH+GE VRTIAMD TEGLVRGQ V +TG+PI++PVG TLGRI+N +GEP+DE + + IH+ AP F +Q+TE ++LVTGIKV DLL PY K K I E N+AKV + VFAG GE REG Sbjct: 6 GKVTQIIGAVVDVQFDGELPAILNALTTDNNGKKLVLEVAQHLGENSVRTIAMDATEGLVRGQEVTDTGAPISIPVGNATLGRILNVVGEPVDEGEPIVAKETRAIHQPAPEFNDQSTESEVLVTGIKVIDLLAPYAKGGKIGLFGGAGVGKTVLIMELINNIAKVHSGYSVFAGVGERTREG 188
BLAST of DY258549 vs. ExPASy Swiss-Prot
Match: ATPB_RICFE (ATP synthase subunit beta OS=Rickettsia felis GN=atpD PE=3 SV=2) HSP 1 Score: 184.496 bits (467), Expect = 1.162e-45 Identity = 102/187 (54.55%), Postives = 123/187 (65.78%), Query Frame = 1 Query: 283 SIGQVCQVIGAVVDVRFDEG--LPPILTALEVEDHSVRLVLEVAQHMGEGVVRTIAMDGTEGLVRGQRVLNTGSPITVPVGRVTLGRIMNDIGEPIDEKGDLKTEHYLPIHREAPAFVEQATEQQILVTGIKVDDLLGPYQKXXXXXXXXXXXERKIEPINETNKNVAKVRGVFLVFAGGGEPNREG 837 +IG++ Q+I AVVDV+F LP IL ALE + R+VLEVAQH+G+ VR IAMD TEGLVRG V++TGSPI +PVG TLGRIMN +GEPID KGD+K+ + I++ AP F Q+TE+ ILVTGIKV DLL PY K K I E NVAK G + VFAG GE REG Sbjct: 4 NIGKITQIISAVVDVKFTNNGELPEILNALECYNDKQRIVLEVAQHIGDDTVRCIAMDSTEGLVRGVEVIDTGSPIRIPVGTETLGRIMNVVGEPIDGKGDIKSSNISSIYKSAPDFTNQSTERNILVTGIKVVDLLAPYTKGGKIGLFGGAGVGKTVLIMELINNVAKAHGGYTVFAGVGERTREG 190
BLAST of DY258549 vs. ExPASy Swiss-Prot
Match: ATPB_GEOSF (ATP synthase subunit beta OS=Geobacter sp. (strain FRC-32) GN=atpD PE=3 SV=1) HSP 1 Score: 184.496 bits (467), Expect = 1.162e-45 Identity = 104/191 (54.45%), Postives = 125/191 (65.45%), Query Frame = 1 Query: 283 SIGQVCQVIGAVVDVRFDEG-LPPILTALEV-----EDHSVRLVLEVAQHMGEGVVRTIAMDGTEGLVRGQRVLNTGSPITVPVGRVTLGRIMNDIGEPIDEKGDLKTEHYLPIHREAPAFVEQATEQQILVTGIKVDDLLGPYQKXXXXXXXXXXXERKIEPINETNKNVAKVRGVFLVFAGGGEPNREG 837 +IG++ QVIGAV+DV F+ G LPPI AL V +D+ LVLEVAQH+GE VRTIAMD T+GLVRGQ VL+TG I+VPVGR TLGRI+N IGEP+DE G + + IHREAP FV+Q+T+ + TGIKV DLL PY + K I E N+AK G F VFAG GE REG Sbjct: 4 NIGKISQVIGAVIDVEFEPGKLPPIYNALRVTNPAIDDNENNLVLEVAQHLGENSVRTIAMDSTDGLVRGQAVLDTGKQISVPVGRKTLGRILNVIGEPVDEMGPVNADKEYGIHREAPEFVDQSTKVEAFTTGIKVVDLLAPYARGGKIGLFGGAGVGKTVLIMELINNIAKQHGGFSVFAGVGERTREG 194
BLAST of DY258549 vs. ExPASy Swiss-Prot
Match: ATPB_RICM5 (ATP synthase subunit beta OS=Rickettsia massiliae (strain Mtu5) GN=atpD PE=3 SV=2) HSP 1 Score: 184.111 bits (466), Expect = 1.518e-45 Identity = 102/187 (54.55%), Postives = 123/187 (65.78%), Query Frame = 1 Query: 283 SIGQVCQVIGAVVDVRFDEG--LPPILTALEVEDHSVRLVLEVAQHMGEGVVRTIAMDGTEGLVRGQRVLNTGSPITVPVGRVTLGRIMNDIGEPIDEKGDLKTEHYLPIHREAPAFVEQATEQQILVTGIKVDDLLGPYQKXXXXXXXXXXXERKIEPINETNKNVAKVRGVFLVFAGGGEPNREG 837 +IG++ Q+I AVVDV+F LP IL ALE + R+VLEVAQH+G+ VR IAMD TEGLVRG V++TGSPI +PVG TLGRIMN +GEPID KGD+K+ + I++ AP F Q+TE+ ILVTGIKV DLL PY K K I E NVAK G + VFAG GE REG Sbjct: 4 NIGKITQIISAVVDVKFTNNGELPEILNALECYNDKQRIVLEVAQHIGDDTVRCIAMDSTEGLVRGVEVIDTGSPIRIPVGTETLGRIMNVVGEPIDGKGDIKSSNISSIYKPAPDFTNQSTERNILVTGIKVIDLLAPYTKGGKIGLFGGAGVGKTVLIMELINNVAKAHGGYTVFAGVGERTREG 190
BLAST of DY258549 vs. ExPASy Swiss-Prot
Match: ATPB_RICAH (ATP synthase subunit beta OS=Rickettsia akari (strain Hartford) GN=atpD PE=3 SV=1) HSP 1 Score: 183.726 bits (465), Expect = 1.982e-45 Identity = 102/187 (54.55%), Postives = 123/187 (65.78%), Query Frame = 1 Query: 283 SIGQVCQVIGAVVDVRFDEG--LPPILTALEVEDHSVRLVLEVAQHMGEGVVRTIAMDGTEGLVRGQRVLNTGSPITVPVGRVTLGRIMNDIGEPIDEKGDLKTEHYLPIHREAPAFVEQATEQQILVTGIKVDDLLGPYQKXXXXXXXXXXXERKIEPINETNKNVAKVRGVFLVFAGGGEPNREG 837 +IG++ Q+I AVVDV+F LP IL ALE + R+VLEVAQH+G+ VR IAMD TEGLVRG V++TGSPI +PVG TLGRIMN +GEPID KGD+K+ + I++ AP F Q+TE+ ILVTGIKV DLL PY K K I E NVAK G + VFAG GE REG Sbjct: 4 NIGKITQIISAVVDVKFTNNGELPEILNALECYNDKQRIVLEVAQHIGDDTVRCIAMDSTEGLVRGVEVMDTGSPICIPVGTETLGRIMNVVGEPIDGKGDIKSSNISAIYKSAPDFTNQSTERNILVTGIKVVDLLAPYIKGGKIGLFGGAGVGKTVLIMELINNVAKAHGGYTVFAGVGERTREG 190
BLAST of DY258549 vs. ExPASy Swiss-Prot
Match: ATPB_GRABC (ATP synthase subunit beta OS=Granulibacter bethesdensis (strain ATCC BAA-1260 / CGDNIH1) GN=atpD PE=3 SV=1) HSP 1 Score: 175.252 bits (443), Expect = 2.243e-45 Identity = 99/185 (53.51%), Postives = 117/185 (63.24%), Query Frame = 1 Query: 283 SIGQVCQVIGAVVDVRFDEGLPPILTALEVEDHSVRLVLEVAQHMGEGVVRTIAMDGTEGLVRGQRVLNTGSPITVPVGRVTLGRIMNDIGEPIDEKGDLKTEHYLPIHREAPAFVEQATEQQILVTGIKVDDLLGPYQKXXXXXXXXXXXERKIEPINETNKNVAKVRGVFLVFAGGGEPNREG 837 ++G+V Q++GAVVDV+FD LP I AL+ L+LEVAQ +GE VR IAMD T+GLVRG V + G PITVPVG TLGRI+N IGEPIDE+G + + IHREAP+F EQA +ILVTGIKV DLL PY K K I E N+AK G VFAG GE REG Sbjct: 5 NVGRVTQILGAVVDVQFDGELPFIQNALQTRIGDRTLILEVAQELGERTVRAIAMDSTDGLVRGAEVEDLGRPITVPVGPGTLGRILNVIGEPIDERGPVDAKKTYSIHREAPSFEEQAASAEILVTGIKVVDLLAPYLKGGKIGLFGGAGVGKTVLIQELINNIAKAHGGVSVFAGVGERTREG 189 HSP 2 Score: 28.8758 bits (63), Expect = 2.243e-45 Identity = 20/46 (43.48%), Postives = 22/46 (47.83%), Query Frame = 3 Query: 840 NDL*REMIEEGCYK*GEKKAENQKGDLVRTKGMTPLLARAWGGLDG 977 NDL EMI+ G K GE E K LV + P ARA L G Sbjct: 190 NDLYHEMIDAGVIKLGENTTEGSKVALVYGQMNEPPGARARVALSG 235
BLAST of DY258549 vs. ExPASy Swiss-Prot
Match: ATPB_DESVM (ATP synthase subunit beta OS=Desulfovibrio vulgaris (strain Miyazaki F / DSM 19637) GN=atpD PE=3 SV=1) HSP 1 Score: 183.341 bits (464), Expect = 2.589e-45 Identity = 101/190 (53.16%), Postives = 127/190 (66.84%), Query Frame = 1 Query: 283 SIGQVCQVIGAVVDVRFDEG-LPPILTALEVED----HSVRLVLEVAQHMGEGVVRTIAMDGTEGLVRGQRVLNTGSPITVPVGRVTLGRIMNDIGEPIDEKGDLKTEHYLPIHREAPAFVEQATEQQILVTGIKVDDLLGPYQKXXXXXXXXXXXERKIEPINETNKNVAKVRGVFLVFAGGGEPNREG 837 +IG++ QVIGAVVDV F G LP IL+AL++++ + +LV EVAQH+G+ VVRTIAMD TEGLVRG ++TG PI VPVG+ +LGRIMN +G P+DE G +KT+ YLPIHR AP F EQ T+ ++L TGIKV DLL P+ K K + E N+AK G VFAG GE REG Sbjct: 4 NIGKIVQVIGAVVDVEFPSGNLPNILSALDIKNPNNSDAPQLVCEVAQHLGDNVVRTIAMDATEGLVRGMEAVDTGKPIMVPVGKASLGRIMNVVGRPVDEMGPIKTDKYLPIHRPAPEFTEQNTKVELLETGIKVVDLLIPFPKGGKMGLFGGAGVGKTVILMEMINNIAKQHGGISVFAGVGERTREG 193
BLAST of DY258549 vs. ExPASy Swiss-Prot
Match: ATPB_GEOMG (ATP synthase subunit beta OS=Geobacter metallireducens (strain GS-15 / ATCC 53774 / DSM 7210) GN=atpD PE=3 SV=1) HSP 1 Score: 182.185 bits (461), Expect = 5.767e-45 Identity = 102/191 (53.40%), Postives = 123/191 (64.40%), Query Frame = 1 Query: 283 SIGQVCQVIGAVVDVRFDEG-LPPILTALEV-----EDHSVRLVLEVAQHMGEGVVRTIAMDGTEGLVRGQRVLNTGSPITVPVGRVTLGRIMNDIGEPIDEKGDLKTEHYLPIHREAPAFVEQATEQQILVTGIKVDDLLGPYQKXXXXXXXXXXXERKIEPINETNKNVAKVRGVFLVFAGGGEPNREG 837 + G++ QVIGAV+DV F+ G LPPI AL V +D LVLEVAQH+GE VRTIAMD T+GLVRGQ L+TG I+VPVGR TLGRI+N IGEP+DE G + E IHRE+P+FV+Q+T+ + TGIKV DLL PY + K I E N+AK G F VFAG GE REG Sbjct: 4 NFGRISQVIGAVIDVEFEPGKLPPIYNALRVTNPAIDDKEYNLVLEVAQHLGENSVRTIAMDSTDGLVRGQAALDTGKQISVPVGRKTLGRILNVIGEPVDEMGPVNAEKEYGIHRESPSFVDQSTKVEAFTTGIKVVDLLAPYARGGKIGLFGGAGVGKTVLIMELINNIAKQHGGFSVFAGVGERTREG 194
BLAST of DY258549 vs. ExPASy Swiss-Prot
Match: ATPB_RICPU (ATP synthase subunit beta OS=Rickettsia peacockii (strain Rustic) GN=atpD PE=3 SV=1) HSP 1 Score: 181.8 bits (460), Expect = 7.532e-45 Identity = 101/187 (54.01%), Postives = 122/187 (65.24%), Query Frame = 1 Query: 283 SIGQVCQVIGAVVDVRFDEG--LPPILTALEVEDHSVRLVLEVAQHMGEGVVRTIAMDGTEGLVRGQRVLNTGSPITVPVGRVTLGRIMNDIGEPIDEKGDLKTEHYLPIHREAPAFVEQATEQQILVTGIKVDDLLGPYQKXXXXXXXXXXXERKIEPINETNKNVAKVRGVFLVFAGGGEPNREG 837 +IG++ Q+I AVVDV+F LP IL ALE + R+VLEVAQH+G+ VR IAMD EGLVRG V++TGSPI +PVG TLGRIMN +GEPID KGD+K+ + I++ AP F Q+TE+ ILVTGIKV DLL PY K K I E NVAK G + VFAG GE REG Sbjct: 4 NIGKITQIISAVVDVKFTNNSELPEILNALECYNDKQRIVLEVAQHIGDDTVRCIAMDSMEGLVRGVEVIDTGSPIRIPVGTETLGRIMNVVGEPIDGKGDIKSSNISSIYKPAPDFTNQSTERNILVTGIKVIDLLAPYTKGGKIGLFGGAGVGKTVLIMELINNVAKAHGGYTVFAGVGERTREG 190 The following BLAST results are available for this feature:
BLAST of DY258549 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >DY258549 ID=DY258549; Name=DY258549; organism=Citrus clementina; type=EST; length=1270bpback to top |