DY258549
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of DY258549 vs. ExPASy Swiss-Prot
Match: ATPB_RICRS (ATP synthase subunit beta OS=Rickettsia rickettsii (strain Sheila Smith) GN=atpD PE=3 SV=1) HSP 1 Score: 181.415 bits (459), Expect = 9.837e-45 Identity = 101/187 (54.01%), Postives = 123/187 (65.78%), Query Frame = 1 Query: 283 SIGQVCQVIGAVVDVRFDEG--LPPILTALEVEDHSVRLVLEVAQHMGEGVVRTIAMDGTEGLVRGQRVLNTGSPITVPVGRVTLGRIMNDIGEPIDEKGDLKTEHYLPIHREAPAFVEQATEQQILVTGIKVDDLLGPYQKXXXXXXXXXXXERKIEPINETNKNVAKVRGVFLVFAGGGEPNREG 837 +IG++ Q+I AVVDV+F LP IL ALE + + R+VLEVAQH+G+ VR IAMD EGLVRG V++TGSPI +PVG TLGRIMN +GEPID KGD+K+ + I++ AP F Q+TE+ ILVTGIKV DLL PY K K I E NVAK G + VFAG GE REG Sbjct: 4 NIGKITQIISAVVDVKFTNNGKLPEILNALECYNDTRRVVLEVAQHIGDDTVRCIAMDSMEGLVRGVEVIDTGSPIRIPVGTETLGRIMNVVGEPIDGKGDIKSSNISSIYKPAPDFTNQSTERNILVTGIKVIDLLAPYTKGGKIGLFGGAGVGKTVLIMELINNVAKAHGGYTVFAGVGERTREG 190
BLAST of DY258549 vs. ExPASy Swiss-Prot
Match: ATPB_RICRO (ATP synthase subunit beta OS=Rickettsia rickettsii (strain Iowa) GN=atpD PE=3 SV=2) HSP 1 Score: 181.415 bits (459), Expect = 9.837e-45 Identity = 101/187 (54.01%), Postives = 123/187 (65.78%), Query Frame = 1 Query: 283 SIGQVCQVIGAVVDVRFDEG--LPPILTALEVEDHSVRLVLEVAQHMGEGVVRTIAMDGTEGLVRGQRVLNTGSPITVPVGRVTLGRIMNDIGEPIDEKGDLKTEHYLPIHREAPAFVEQATEQQILVTGIKVDDLLGPYQKXXXXXXXXXXXERKIEPINETNKNVAKVRGVFLVFAGGGEPNREG 837 +IG++ Q+I AVVDV+F LP IL ALE + + R+VLEVAQH+G+ VR IAMD EGLVRG V++TGSPI +PVG TLGRIMN +GEPID KGD+K+ + I++ AP F Q+TE+ ILVTGIKV DLL PY K K I E NVAK G + VFAG GE REG Sbjct: 4 NIGKITQIISAVVDVKFTNNGKLPEILNALECYNDTRRVVLEVAQHIGDDTVRCIAMDSMEGLVRGVEVIDTGSPIRIPVGTETLGRIMNVVGEPIDGKGDIKSSNISSIYKPAPDFTNQSTERNILVTGIKVIDLLAPYTKGGKIGLFGGAGVGKTVLIMELINNVAKAHGGYTVFAGVGERTREG 190
BLAST of DY258549 vs. ExPASy Swiss-Prot
Match: ATPB_RICAE (ATP synthase subunit beta OS=Rickettsia africae (strain ESF-5) GN=atpD PE=3 SV=1) HSP 1 Score: 181.415 bits (459), Expect = 9.837e-45 Identity = 101/187 (54.01%), Postives = 122/187 (65.24%), Query Frame = 1 Query: 283 SIGQVCQVIGAVVDVRFDEG--LPPILTALEVEDHSVRLVLEVAQHMGEGVVRTIAMDGTEGLVRGQRVLNTGSPITVPVGRVTLGRIMNDIGEPIDEKGDLKTEHYLPIHREAPAFVEQATEQQILVTGIKVDDLLGPYQKXXXXXXXXXXXERKIEPINETNKNVAKVRGVFLVFAGGGEPNREG 837 +IG++ Q+I AVVDV+F LP IL ALE + R+VLEVAQH+G+ VR IAMD EGLVRG V++TGSPI +PVG TLGRIMN +GEPID KGD+K+ + I++ AP F Q+TE+ ILVTGIKV DLL PY K K I E NVAK G + VFAG GE REG Sbjct: 4 NIGKITQIISAVVDVKFTNNGELPEILNALECYNDKHRIVLEVAQHIGDDTVRCIAMDSMEGLVRGVEVIDTGSPIRIPVGTETLGRIMNVVGEPIDGKGDIKSSNISSIYKPAPDFTNQSTERNILVTGIKVIDLLAPYTKGGKIGLFGGAGVGKTVLIMELINNVAKAHGGYTVFAGVGERTREG 190
BLAST of DY258549 vs. ExPASy Swiss-Prot
Match: ATPB_ALKOO (ATP synthase subunit beta OS=Alkaliphilus oremlandii (strain OhILAs) GN=atpD PE=3 SV=1) HSP 1 Score: 181.415 bits (459), Expect = 9.837e-45 Identity = 99/204 (48.53%), Postives = 130/204 (63.73%), Query Frame = 1 Query: 277 KGSIGQVCQVIGAVVDVRFD-EGLPPILTALEVEDHSVRLVLEVAQHMGEGVVRTIAMDGTEGLVRGQRVLNTGSPITVPVGRVTLGRIMNDIGEPIDEKGDLKTEHYLPIHREAPAFVEQATEQQILVTGIKVDDLLGPYQKXXXXXXXXXXXERKIEPINETNKNVAKVRGVFLVFAGGGEPNREGKMTCNGK*LKRGVISK 885 +G++G++ Q+IG V+D+RF E LP +L A+E+E ++V+EV+QH+G+ VR +AM T+GLVRG +TG PITVPVGR TLGRI N IGEP+DEKG + E PIHR AP+F +QAT +IL TGIKV DL+ PY K K I E N+AK G VF+G GE REG N + ++ GVI K Sbjct: 3 EGNVGKLVQIIGPVIDIRFSRENLPNLLNAIEIEGPDGKIVVEVSQHIGDDTVRCVAMKSTDGLVRGMEAKDTGGPITVPVGRATLGRIFNVIGEPVDEKGAVAAEAKAPIHRPAPSFEDQATSTEILETGIKVVDLIAPYLKGGKIGLFGGAGVGKTVLIMELINNIAKEHGGLSVFSGVGERTREGNDLYN-EMIESGVIDK 205
BLAST of DY258549 vs. ExPASy Swiss-Prot
Match: ATPB_RICPR (ATP synthase subunit beta OS=Rickettsia prowazekii GN=atpD PE=3 SV=2) HSP 1 Score: 181.03 bits (458), Expect = 1.285e-44 Identity = 100/187 (53.48%), Postives = 123/187 (65.78%), Query Frame = 1 Query: 283 SIGQVCQVIGAVVDVRFDEG--LPPILTALEVEDHSVRLVLEVAQHMGEGVVRTIAMDGTEGLVRGQRVLNTGSPITVPVGRVTLGRIMNDIGEPIDEKGDLKTEHYLPIHREAPAFVEQATEQQILVTGIKVDDLLGPYQKXXXXXXXXXXXERKIEPINETNKNVAKVRGVFLVFAGGGEPNREG 837 +IG++ QVI AVVDV+F LP IL ALE + R+VLEVAQH+G+ VR IAMD TEGL+RG V++TG+PI +PVG TLGRIMN +GEPID KG++K+ I++ AP F+ Q+TE+ ILVTGIKV DLL PY K K I E NVAK G + VFAG GE REG Sbjct: 4 NIGKITQVISAVVDVKFTNNGKLPEILNALECYNDKQRIVLEVAQHIGDDTVRCIAMDSTEGLIRGLEVIDTGNPIRIPVGTETLGRIMNVVGEPIDGKGEIKSATISSIYKPAPDFINQSTERDILVTGIKVVDLLAPYAKGGKIGLFGGAGVGKTVLIMELINNVAKAHGGYTVFAGVGERTREG 190
BLAST of DY258549 vs. ExPASy Swiss-Prot
Match: ATPB_GEOUR (ATP synthase subunit beta OS=Geobacter uraniireducens (strain Rf4) GN=atpD PE=3 SV=1) HSP 1 Score: 180.644 bits (457), Expect = 1.678e-44 Identity = 102/191 (53.40%), Postives = 124/191 (64.92%), Query Frame = 1 Query: 283 SIGQVCQVIGAVVDVRFDEG-LPPILTALEVEDHSV-----RLVLEVAQHMGEGVVRTIAMDGTEGLVRGQRVLNTGSPITVPVGRVTLGRIMNDIGEPIDEKGDLKTEHYLPIHREAPAFVEQATEQQILVTGIKVDDLLGPYQKXXXXXXXXXXXERKIEPINETNKNVAKVRGVFLVFAGGGEPNREG 837 +IG++ QVIGAV+DV F+ G LPPI AL V + S+ LVLEVAQH+GE VRTIAMD T+GLVRGQ ++TG I+VPVGR TLGRI+N IG+P+DE G + E IHREAPAFV+Q+T+ + TGIKV DLL PY + K I E N+A G F VFAG GE REG Sbjct: 4 NIGKISQVIGAVIDVEFEPGKLPPIYNALRVTNPSIDDKENNLVLEVAQHLGENSVRTIAMDSTDGLVRGQAAIDTGKQISVPVGRKTLGRILNVIGDPVDEMGPVGAEKEYGIHREAPAFVDQSTKVEAFTTGIKVVDLLAPYARGGKIGLFGGAGVGKTVLIMELINNIAMQHGGFSVFAGVGERTREG 194
BLAST of DY258549 vs. ExPASy Swiss-Prot
Match: ATPB_GEOSM (ATP synthase subunit beta OS=Geobacter sp. (strain M21) GN=atpD PE=3 SV=1) HSP 1 Score: 180.644 bits (457), Expect = 1.678e-44 Identity = 102/191 (53.40%), Postives = 122/191 (63.87%), Query Frame = 1 Query: 283 SIGQVCQVIGAVVDVRFDEG-LPPILTALEV-----EDHSVRLVLEVAQHMGEGVVRTIAMDGTEGLVRGQRVLNTGSPITVPVGRVTLGRIMNDIGEPIDEKGDLKTEHYLPIHREAPAFVEQATEQQILVTGIKVDDLLGPYQKXXXXXXXXXXXERKIEPINETNKNVAKVRGVFLVFAGGGEPNREG 837 + G++ QVIGAV+DV F+ G LPPI AL V +D LVLEVAQH+GE VRTIAMD T+GLVRGQ+V + G I+VPVG+ TLGRI+N IGEP+DE G + E IHREAPAFV Q+T+ + TGIKV DLL PY + K I E N+AK G F VFAG GE REG Sbjct: 4 NFGKISQVIGAVIDVEFEPGKLPPIYQALRVTNPAIDDQEFNLVLEVAQHLGENAVRTIAMDSTDGLVRGQQVKDMGKQISVPVGKKTLGRILNVIGEPVDEMGPIGNEKEYGIHREAPAFVNQSTKVEAFTTGIKVVDLLAPYARGGKIGLFGGAGVGKTVLIMELINNIAKQHGGFSVFAGVGERTREG 194
BLAST of DY258549 vs. ExPASy Swiss-Prot
Match: ATPB_RICCN (ATP synthase subunit beta OS=Rickettsia conorii GN=atpD PE=3 SV=2) HSP 1 Score: 180.259 bits (456), Expect = 2.191e-44 Identity = 101/187 (54.01%), Postives = 121/187 (64.71%), Query Frame = 1 Query: 283 SIGQVCQVIGAVVDVRFDEG--LPPILTALEVEDHSVRLVLEVAQHMGEGVVRTIAMDGTEGLVRGQRVLNTGSPITVPVGRVTLGRIMNDIGEPIDEKGDLKTEHYLPIHREAPAFVEQATEQQILVTGIKVDDLLGPYQKXXXXXXXXXXXERKIEPINETNKNVAKVRGVFLVFAGGGEPNREG 837 +IG++ Q+I AVVDV+F LP IL ALE + R+VLEVAQH+G+ VR IAMD EGLVRG V++TGSPI +PVG TLGRIMN +GEPID KGD+K+ + I++ AP F Q+TE ILVTGIKV DLL PY K K I E NVAK G + VFAG GE REG Sbjct: 4 NIGKITQIISAVVDVKFTNNGELPKILNALECYNDKQRIVLEVAQHIGDDTVRCIAMDSMEGLVRGVEVIDTGSPIRIPVGTETLGRIMNVVGEPIDGKGDIKSSNISSIYKPAPDFTHQSTECNILVTGIKVIDLLAPYTKGGKIGLFGGAGVGKTVLIMELINNVAKAHGGYTVFAGVGERTREG 190
BLAST of DY258549 vs. ExPASy Swiss-Prot
Match: ATPB_FUSNN (ATP synthase subunit beta OS=Fusobacterium nucleatum subsp. nucleatum GN=atpD PE=3 SV=1) HSP 1 Score: 179.874 bits (455), Expect = 2.862e-44 Identity = 99/199 (49.75%), Postives = 124/199 (62.31%), Query Frame = 1 Query: 289 GQVCQVIGAVVDVRFDEGLPPILTALEVEDHSVRLVLEVAQHMGEGVVRTIAMDGTEGLVRGQRVLNTGSPITVPVGRVTLGRIMNDIGEPIDEKGDLKTEHYLPIHREAPAFVEQATEQQILVTGIKVDDLLGPYQKXXXXXXXXXXXERKIEPINETNKNVAKVRGVFLVFAGGGEPNREGKMTCNGK*LKRGVISK 885 G + Q+I AVVD+ F + LP I AL+V+ LVLEV QH+G VVRT+AMD T+GL RG V++TG PIT+PVG+ LGRI+N +GEP+D +G L E +LPIHREAP F + TE +I TGIKV DLL PY K K I E N+AK G VFAG GE REG+ G+ + GVI+K Sbjct: 4 GTITQIISAVVDIAFKDELPAIYNALKVKLEDKELVLEVEQHLGNNVVRTVAMDSTDGLKRGMEVIDTGKPITIPVGKAVLGRILNVLGEPVDNQGPLNAETFLPIHREAPEFDDLETETEIFETGIKVIDLLAPYIKGGKIGLFGGAGVGKTVLIMELINNIAKGHGGISVFAGVGERTREGR-DLYGEMTESGVITK 201
BLAST of DY258549 vs. ExPASy Swiss-Prot
Match: ATPB_CAUCR (ATP synthase subunit beta OS=Caulobacter crescentus GN=atpD PE=3 SV=1) HSP 1 Score: 179.874 bits (455), Expect = 2.862e-44 Identity = 98/189 (51.85%), Postives = 123/189 (65.08%), Query Frame = 1 Query: 277 KGSIGQVCQVIGAVVDVRFDEGLPPILTALEVEDHSV--RLVLEVAQHMGEGVVRTIAMDGTEGLVRGQRVLNTGSPITVPVGRVTLGRIMNDIGEPIDEKGDLKTEHYLPIHREAPAFVEQATEQQILVTGIKVDDLLGPYQKXXXXXXXXXXXERKIEPINETNKNVAKVRGVFLVFAGGGEPNREG 837 +G+ G++ Q+IGAVVD+ FD LP IL A+E + + RLV EVAQH+G+ VR IAMD TEGLVRGQ V +TG PI VPVG TLGRIMN IGEPIDE+G ++++ IHR+AP+F EQ ++LVTGIKV DL+ PY K K + E N+AK G + V AG GE REG Sbjct: 61 EGATGRLVQIIGAVVDIEFDGALPAILNAVETVNTATGQRLVFEVAQHLGQSTVRAIAMDATEGLVRGQPVRDTGEPIRVPVGPGTLGRIMNVIGEPIDEQGPIRSDISRTIHRDAPSFAEQTNTAEVLVTGIKVIDLMCPYTKGGKIGLFGGAGVGKTVTMQELINNIAKAYGGYSVLAGVGERTREG 249 The following BLAST results are available for this feature:
BLAST of DY258549 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >DY258549 ID=DY258549; Name=DY258549; organism=Citrus clementina; type=EST; length=1270bpback to top |