DY258554

Overview
NameDY258554
Unique NameDY258554
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length473
Libraries
Library NameType
AbsDev1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of DY258554 vs. ExPASy Swiss-Prot
Match: PER49_ARATH (Peroxidase 49 OS=Arabidopsis thaliana GN=PER49 PE=2 SV=2)

HSP 1 Score: 87.4261 bits (215), Expect = 3.369e-17
Identity = 43/92 (46.74%), Postives = 60/92 (65.22%), Query Frame = 3
Query:    6 GNGAVLANFDVKTPDAFDNKYFSNLRLRKGLLQSDQELFSTPGADTAAIVEDFGRNQTAFFKNFVISMIRMGNLKPLTGNQGEIRLNCRRVN 281
            G   +L+  D+ +  +FDN YF NL   KGLL SDQ LFS+    +  +V+ +  +Q  FF+ F  SMI+MGN+ PLTG+ GEIR NCR++N
Sbjct:  240 GGDQILSVLDIISAASFDNSYFKNLIENKGLLNSDQVLFSS-NEKSRELVKKYAEDQGEFFEQFAESMIKMGNISPLTGSSGEIRKNCRKIN 330          
BLAST of DY258554 vs. ExPASy Swiss-Prot
Match: PER66_MAIZE (Peroxidase 66 OS=Zea mays GN=PER66 PE=1 SV=1)

HSP 1 Score: 86.6557 bits (213), Expect = 5.746e-17
Identity = 43/87 (49.43%), Postives = 58/87 (66.67%), Query Frame = 3
Query:   21 LANFDVKTPDAFDNKYFSNLRLRKGLLQSDQELFSTPGADTAAIVEDFGRNQTAFFKNFVISMIRMGNLKPLTGNQGEIRLNCRRVN 281
            LA  D  TP+AFDN Y++NL  +KGLL SDQELF++   D+   V  F  + +AF   F  +M++MGNL P TG QG+IR +C +VN
Sbjct:  235 LAPLDTTTPNAFDNAYYTNLLSQKGLLHSDQELFNSGSTDST--VRSFASSTSAFNSAFATAMVKMGNLSPQTGTQGQIRRSCWKVN 319          
BLAST of DY258554 vs. ExPASy Swiss-Prot
Match: PER59_ARATH (Peroxidase 59 OS=Arabidopsis thaliana GN=PER59 PE=1 SV=2)

HSP 1 Score: 86.6557 bits (213), Expect = 5.746e-17
Identity = 47/95 (49.47%), Postives = 59/95 (62.11%), Query Frame = 3
Query:    3 GGNGAVLANFDVKTPDAFDNKYFSNLRLRKGLLQSDQELFSTPGA--DTAAIVEDFGRNQTAFFKNFVISMIRMGNLKPLTGNQGEIRLNCRRVN 281
            GGN  + A  D  T D FDN YF NL   KGLL SDQ LFS+  A   T  +VE + R+Q+ FF++F  +MIRMGN+    G  GE+R NCR +N
Sbjct:  235 GGNSNITAPLDRSTTDTFDNNYFKNLLEGKGLLSSDQILFSSDLAVNTTKKLVEAYSRSQSLFFRDFTCAMIRMGNIS--NGASGEVRTNCRVIN 327          
BLAST of DY258554 vs. ExPASy Swiss-Prot
Match: PERN_ARMRU (Peroxidase N OS=Armoracia rusticana GN=HRPN PE=2 SV=1)

HSP 1 Score: 86.2705 bits (212), Expect = 7.505e-17
Identity = 49/95 (51.58%), Postives = 60/95 (63.16%), Query Frame = 3
Query:    3 GGNGAVLANFDVKTPDAFDNKYFSNLRLRKGLLQSDQELFSTPGA--DTAAIVEDFGRNQTAFFKNFVISMIRMGNLKPLTGNQGEIRLNCRRVN 281
            GGNG   A  D  + DAFDN YF NL   KGLL SDQ LFS+  A   T  +VE + R+Q  FF++F  SMIRMG+L  + G  GE+R NCR +N
Sbjct:  235 GGNGNKTAPLDRNSTDAFDNNYFKNLLEGKGLLSSDQILFSSDLAVNTTKRLVEAYSRSQYLFFRDFTCSMIRMGSL--VNGASGEVRTNCRVIN 327          
BLAST of DY258554 vs. ExPASy Swiss-Prot
Match: PER68_ARATH (Peroxidase 68 OS=Arabidopsis thaliana GN=PER68 PE=2 SV=1)

HSP 1 Score: 85.1149 bits (209), Expect = 1.672e-16
Identity = 43/93 (46.24%), Postives = 62/93 (66.67%), Query Frame = 3
Query:    3 GGNGAVLANFDVKTPDAFDNKYFSNLRLRKGLLQSDQELFSTPGADTAAIVEDFGRNQTAFFKNFVISMIRMGNLKPLTGNQGEIRLNCRRVN 281
            G N A +   D++TP+ FD  YF  L   +GLL SDQ LF+  G  T +IV  + R+  AF+++FV +MI+MG++ PLTG+ G+IR +CRR N
Sbjct:  237 GDNNAAI--LDLRTPEKFDGSYFMQLVNHRGLLTSDQVLFN--GGSTDSIVVSYSRSVQAFYRDFVAAMIKMGDISPLTGSNGQIRRSCRRPN 325          
BLAST of DY258554 vs. ExPASy Swiss-Prot
Match: PER67_ARATH (Peroxidase 67 OS=Arabidopsis thaliana GN=PER67 PE=2 SV=1)

HSP 1 Score: 84.7297 bits (208), Expect = 2.184e-16
Identity = 40/86 (46.51%), Postives = 58/86 (67.44%), Query Frame = 3
Query:   24 ANFDVKTPDAFDNKYFSNLRLRKGLLQSDQELFSTPGADTAAIVEDFGRNQTAFFKNFVISMIRMGNLKPLTGNQGEIRLNCRRVN 281
            AN DV++PD FD+ ++  L  +KGLL SDQ LF+    D+  I   +  N  AF+++F  +MI+MG++ PLTG+ G+IR NCRR N
Sbjct:  233 ANLDVRSPDRFDHGFYKQLLSKKGLLTSDQVLFNNGPTDSLVIA--YSHNLNAFYRDFARAMIKMGDISPLTGSNGQIRQNCRRPN 316          
BLAST of DY258554 vs. ExPASy Swiss-Prot
Match: PER15_ARATH (Peroxidase 15 OS=Arabidopsis thaliana GN=PER15 PE=2 SV=1)

HSP 1 Score: 84.7297 bits (208), Expect = 2.184e-16
Identity = 41/94 (43.62%), Postives = 58/94 (61.70%), Query Frame = 3
Query:    6 GNGAVLANFDVKTPDAFDNKYFSNLRLRKGLLQSDQELFSTPGADTAAIVEDFGRNQTAFFKNFVISMIRMGNLKPLTGNQGEIRLNCRRVNGN 287
            G    L+  D+ +   FDN YF NL    GLL SD+ LFS+    +  +V+ +  +Q  FF+ F  SMI+MGN+ PLTG+ GEIR NCR++N +
Sbjct:  246 GGDQNLSELDINSAGRFDNSYFKNLIENMGLLNSDEVLFSS-NEQSRELVKKYAEDQEEFFEQFAESMIKMGNISPLTGSSGEIRKNCRKINNS 338          
BLAST of DY258554 vs. ExPASy Swiss-Prot
Match: PER42_MAIZE (Peroxidase 42 OS=Zea mays GN=PER42 PE=2 SV=1)

HSP 1 Score: 84.3445 bits (207), Expect = 2.852e-16
Identity = 42/92 (45.65%), Postives = 56/92 (60.87%), Query Frame = 3
Query:   12 GAVLANFDVKTPDAFDNKYFSNLRLRKGLLQSDQELFSTPGADTAAIVEDFGRNQTAFFKNFVISMIRMGNLKPLTGNQGEIRLNCRRVNGN 287
            G+ LA  D  TP  F N Y+ NL  +KGLL SDQELF+    D+   V +F  +  AF   F  +M++MGNL PLTG  G+IRL C ++N +
Sbjct:  232 GSSLAPLDTMTPTVFGNDYYKNLLSQKGLLHSDQELFNNGSTDST--VSNFASSSAAFTSAFTAAMVKMGNLGPLTGTSGQIRLTCWKLNSS 321          
BLAST of DY258554 vs. ExPASy Swiss-Prot
Match: PER52_ARATH (Peroxidase 52 OS=Arabidopsis thaliana GN=PER52 PE=2 SV=1)

HSP 1 Score: 83.5741 bits (205), Expect = 4.865e-16
Identity = 43/93 (46.24%), Postives = 57/93 (61.29%), Query Frame = 3
Query:    3 GGNGAVLANFDVKTPDAFDNKYFSNLRLRKGLLQSDQELFSTPGADTAAIVEDFGRNQTAFFKNFVISMIRMGNLKPLTGNQGEIRLNCRRVN 281
            G     LA  DV T  +FDN YF NL  ++GLL SDQ LF+  G  T +IV  +  N ++F  +F  +MI+MG++ PLTG+ GEIR  C R N
Sbjct:  234 GSGDGNLAPLDVTTAASFDNNYFKNLMTQRGLLHSDQVLFN--GGSTDSIVRGYSNNPSSFNSDFTAAMIKMGDISPLTGSSGEIRKVCGRTN 324          
BLAST of DY258554 vs. ExPASy Swiss-Prot
Match: PER4_VITVI (Peroxidase 4 OS=Vitis vinifera GN=GSVIVT00023967001 PE=1 SV=1)

HSP 1 Score: 82.0333 bits (201), Expect = 1.415e-15
Identity = 41/87 (47.13%), Postives = 58/87 (66.67%), Query Frame = 3
Query:   21 LANFDVKTPDAFDNKYFSNLRLRKGLLQSDQELFSTPGADTAAIVEDFGRNQTAFFKNFVISMIRMGNLKPLTGNQGEIRLNCRRVN 281
            LA  D++TP  FDN Y+ NL  +KGLL SDQ L++  G  T + V+ +  N   F  +FV  MI+MG++ PLTG++GEIR +C +VN
Sbjct:  237 LAPLDLQTPTTFDNYYYKNLINQKGLLHSDQVLYN--GGSTDSTVKTYVNNPKTFTSDFVAGMIKMGDITPLTGSEGEIRKSCGKVN 321          
The following BLAST results are available for this feature:
BLAST of DY258554 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 58
Match NameE-valueIdentityDescription
PER49_ARATH3.369e-1746.74Peroxidase 49 OS=Arabidopsis thaliana GN=PER49 PE=... [more]
PER66_MAIZE5.746e-1749.43Peroxidase 66 OS=Zea mays GN=PER66 PE=1 SV=1[more]
PER59_ARATH5.746e-1749.47Peroxidase 59 OS=Arabidopsis thaliana GN=PER59 PE=... [more]
PERN_ARMRU7.505e-1751.58Peroxidase N OS=Armoracia rusticana GN=HRPN PE=2 S... [more]
PER68_ARATH1.672e-1646.24Peroxidase 68 OS=Arabidopsis thaliana GN=PER68 PE=... [more]
PER67_ARATH2.184e-1646.51Peroxidase 67 OS=Arabidopsis thaliana GN=PER67 PE=... [more]
PER15_ARATH2.184e-1643.62Peroxidase 15 OS=Arabidopsis thaliana GN=PER15 PE=... [more]
PER42_MAIZE2.852e-1645.65Peroxidase 42 OS=Zea mays GN=PER42 PE=2 SV=1[more]
PER52_ARATH4.865e-1646.24Peroxidase 52 OS=Arabidopsis thaliana GN=PER52 PE=... [more]
PER4_VITVI1.415e-1547.13Peroxidase 4 OS=Vitis vinifera GN=GSVIVT0002396700... [more]

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Properties
Property NameValue
Genbank descriptionKN0AAI2BD09FM1 AbsDev1 Citrus clementina cDNA 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DY258554 ID=DY258554; Name=DY258554; organism=Citrus clementina; type=EST; length=473bp
AGGGTGGAAACGGCGCCGTTCTTGCTAATTTTGATGTCAAAACACCTGAT
GCTTTCGACAACAAATACTTCTCCAATCTTAGACTCCGCAAAGGCCTTCT
GCAGAGTGATCAAGAGTTGTTTTCGACTCCTGGTGCCGATACCGCTGCCA
TTGTCGAGGACTTTGGGAGGAACCAGACTGCTTTCTTTAAAAACTTTGTG
ATCTCAATGATAAGAATGGGCAATTTGAAACCACTGACAGGAAATCAAGG
GGAGATTAGATTGAACTGCAGGAGGGTCAATGGAAACAATAATATTGCAA
CAAGATCATCATCATCGGAGGGTGATTTGGTCAGCTCTTTCTAATAAGCT
AGCTTGCGGCATATGCGAGAGAGTTTTTGTGCTTAACAAACTCGAATTTA
ATCTTATCGTTTGGCCTGAAACATGTTATGTGTTTTCAAATAAATTAACT
ATCAAACTTGAGTTTAAAAAAAA
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