DY258597

Overview
NameDY258597
Unique NameDY258597
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length1290
Libraries
Library NameType
AbsDev1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of DY258597 vs. ExPASy Swiss-Prot
Match: FDH1_YEAST (Formate dehydrogenase 1 OS=Saccharomyces cerevisiae GN=FDH1 PE=2 SV=1)

HSP 1 Score: 219.164 bits (557), Expect = 4.355e-56
Identity = 121/292 (41.44%), Postives = 177/292 (60.62%), Query Frame = 1
Query:  118 KIVGVFYKGNEYASMNPNFLGCVEGGCGLREWLESKGHQYIVTDDKEG-PDCELEKHIPDLHVLISTPFHPAYVTAERIKKAKNLQLLLTAGVGSDHIDLNXXXXXGLTVAEVTGSNVVSVAEDELMRILILVRNFLPGHHQVISGEWNVAGVAYRAHDLEGKTVGTVGCGRIGKLLLQRLXPFN-CNLLYHDRVKMDPQL---EKETGAKFE---------EDLDTMLPKCDIVVVNTPLTEKTRGMFDKDRIAKMKKGVLIANNARGAIMDTQAGC*PLLLGKPLEGYRG 951
            K++ V Y+G ++A      LGC+E   G+R ++E +G++ + T DK+  P   +++ + D  ++I+TPF PAY++  RI +A NL+L +TAGVGSDH+DL       +TV EVTGSNVVSVAE  +  IL+L+RN+  GH Q I+GEW++AGVA   +DLE K + TVG GRIG  +L+RL  FN   LLY+D  ++  +      E    F          E L+ M+ + D+V +N PL + +RG+F+K  I+ MK G  + N ARGAI   +     +  GK L GY G
Sbjct:    5 KVLLVLYEGGKHAEEQEKLLGCIENELGIRNFIEEQGYELVTTIDKDPEPTSTVDRELKDAEIVITTPFFPAYISRNRIAEAPNLKLCVTAGVGSDHVDLEAANERKITVTEVTGSNVVSVAEHVMATILVLIRNYNGGHQQAINGEWDIAGVAKNEYDLEDKIISTVGAGRIGYRVLERLVAFNPKKLLYYDYQELPAEAINRLNEASKLFNGRGDIVQRVEKLEDMVAQSDVVTINCPLHKDSRGLFNKKLISHMKDGAYLVNTARGAICVAEDVAEAVKSGK-LAGYGG 295          
BLAST of DY258597 vs. ExPASy Swiss-Prot
Match: SERA_BACSU (D-3-phosphoglycerate dehydrogenase OS=Bacillus subtilis GN=serA PE=3 SV=3)

HSP 1 Score: 115.546 bits (288), Expect = 6.782e-25
Identity = 83/238 (34.87%), Postives = 118/238 (49.58%), Query Frame = 1
Query:  199 GLREWLESKGHQYIVTDDKEGPDCELEKHIPDLHVLISTPFHPAYVTAERIKKAKNLQLLLTAGVGSDHIDLNXXXXXGLTVAEVTGSNVVSVAEDELMRILILVRNFLPGHHQVISGEWNVAGVAYRAHDLEGKTVGTVGCGRIGKLLLQRLXPFNCNLLYHDRVKMDPQLEKETGAKF---EEDLDTMLPKCDIVVVNTPLTEKTRGMFDKDRIAKMKKGVLIANNARGAIMDTQA 903
            GL+  +ES    +I    K   D E E H  D  ++ S       VT +   K  +L+++  AGVG D+ID++     G+ V      N +S AE     I  L+R+    +  V S EWN    AY   +L GKT+G VG GRIG  + QR   F   +        DP L +E   K        + +L   DI+ V+TPLT++T+G+ +K+ IAK KKGV + N ARG I+D  A
Sbjct:   14 GLQPLIES---DFIEIVQKNVADAEDELHTFDALLVRSA----TKVTEDLFNKMTSLKIVGRAGVGVDNIDIDEATKHGVIVINAPNGNTISTAEHTFAMISSLMRHIPQANISVKSREWN--RTAYVGSELYGKTLGIVGLGRIGSEIAQRARAFGMTVHV-----FDPFLTEERAKKIGVNSRTFEEVLESADIITVHTPLTKETKGLLNKETIAKTKKGVRLINCARGGIIDEAA 237          
BLAST of DY258597 vs. ExPASy Swiss-Prot
Match: GYAR_PYRAB (Glyoxylate reductase OS=Pyrococcus abyssi GN=gyaR PE=3 SV=1)

HSP 1 Score: 115.546 bits (288), Expect = 6.782e-25
Identity = 72/237 (30.38%), Postives = 126/237 (53.16%), Query Frame = 1
Query:  208 EWLESKGHQYIVTDDKEGPDCELEKHIPDLHVLISTPFHPAYVTAERIKKAKNLQLLLTAGVGSDHIDLNXXXXXGLTVAEVTGSNVVSVAEDELMRILILVRNFLPGHHQVISGEWNVAGVAYR-----AHDLEGKTVGTVGCGRIGKLLLQRLXPFNCNLLYHDRVKMDPQLEKETGAKFEEDLDTMLPKCDIVVVNTPLTEKTRGMFDKDRIAKMKKGVLIANNARGAIMDTQA 903
            E LE +    +  D++E P   L + + D+  L++       +  E  ++A  L+++    VG D+ID+      G+ V    G    + A+     +L   R+ + G     SGEW   GVA+       +D+ GKT+G +G GRIG+ + +R   F+  +LY+ R +  P++EKE  A+F+  LD +L + D VV+  PL ++T  M +++R+  MK+  ++ N ARG ++DT+A
Sbjct:   18 EMLEKEFEVEVWEDEREIPREILLEKVKDVDALVT--MLSERIDREVFERAPRLRIVANYAVGYDNIDVEEATKRGIYVTNTPGVLTDATADLAFALLLATARHLVKGDKFTRSGEWKKRGVAWHPKWFLGYDVYGKTIGIIGFGRIGQAIAKRARGFDMRILYYSRTRK-PEVEKELNAEFKP-LDELLRESDFVVLAVPLNKETYHMINEERLKMMKRTAILINVARGKVIDTKA 250          
BLAST of DY258597 vs. ExPASy Swiss-Prot
Match: SERA_ARCFU (D-3-phosphoglycerate dehydrogenase OS=Archaeoglobus fulgidus GN=serA PE=3 SV=1)

HSP 1 Score: 114.775 bits (286), Expect = 1.157e-24
Identity = 69/211 (32.70%), Postives = 107/211 (50.71%), Query Frame = 1
Query:  271 ELEKHIPDLHVLISTPFHPAYVTAERIKKAKNLQLLLTAGVGSDHIDLNXXXXXGLTVAEVTGSNVVSVAEDELMRILILVRNFLPGHHQVISGEWNVAGVAYRAHDLEGKTVGTVGCGRIGKLLLQRLXPFNCNLLYHDRVKMDPQLEKETGAKFEEDLDTMLPKCDIVVVNTPLTEKTRGMFDKDRIAKMKKGVLIANNARGAIMDTQA 903
            EL + +P    ++        V AE I+ AKNL+++  AGVG D+ID+N     G+ V    G N +S AE  +  +L   R        V  G+W      +   +L GKT G +G GR+G  + +R      N+L +D   +  +  ++ G K   D DT+L   D++ V+ P T++T G+  K +  KMK GV++ N ARG I+D  A
Sbjct:   34 ELIREVPKYEAIVVRS--QTKVDAEVIQAAKNLKIIGRAGVGVDNIDINAATQRGIVVVNAPGGNTISTAEHAIALMLAAARKIPQADRSVKEGKWE--RKKFMGIELRGKTAGVIGLGRVGFEVAKRCKALEMNVLAYDPF-VSKERAEQIGVKL-VDFDTLLASSDVITVHVPRTKETIGLIGKGQFEKMKDGVIVVNAARGGIVDEAA 238          
BLAST of DY258597 vs. ExPASy Swiss-Prot
Match: GYAR_THEPD (Glyoxylate reductase OS=Thermofilum pendens (strain Hrk 5) GN=gyaR PE=3 SV=1)

HSP 1 Score: 113.62 bits (283), Expect = 2.577e-24
Identity = 77/228 (33.77%), Postives = 123/228 (53.95%), Query Frame = 1
Query:  238 IVTDDKEGPDC--ELEKHIPDLHVLISTPFHPAYVTAERIKKAKNLQLLLTAGVGSDHIDLNXXXXXGLTVAEVTGSNVVSVAEDELMRILILVRNFLPGHHQVISGEWNVAGVAY--RAHDLEGKTVGTVGCGRIGKLLLQRLXPFNCNLLYHDRVKMDPQLEKETGAKFEE--DLDTMLPKCDIVVVNTPLTEKTRGMFDKDRIAKMKKGVLIANNARGAIMDTQA 903
            +V + K+ P    EL ++I D   L+        + AE +  A NL+++ T  VG DHID+      G+ V    G    +VAE  +  IL + R  +     + +G+W+     Y     +L+GKT+G VG GRIG    +RL  F+  +LY+D   ++ + + ET     E  DLDT+L K DIV ++ PLT++T  + +++R+ KMKK   + N ARG ++DT+A
Sbjct:   27 VVHESKDWPPSREELLRNIRDKDALLCLLTDK--IDAEVMDAAPNLKVISTYSVGFDHIDIPEATKRGIYVTHTPGVLTDAVAEFTVGLILAVTRRIVEADKIIRTGQWDKPWNPYFLTGPELKGKTIGLVGLGRIGVATAKRLSSFDVKILYYD---IERRWDVETVIPNMEFTDLDTLLEKSDIVSIHVPLTKETYHLINEERLRKMKKTAYLINTARGPVVDTEA 249          
BLAST of DY258597 vs. ExPASy Swiss-Prot
Match: GYAR_PYRKO (Glyoxylate reductase OS=Pyrococcus kodakaraensis GN=gyaR PE=3 SV=1)

HSP 1 Score: 112.079 bits (279), Expect = 7.498e-24
Identity = 70/224 (31.25%), Postives = 118/224 (52.68%), Query Frame = 1
Query:  247 DDKEGPDCELEKHIPDLHVLISTPFHPAYVTAERIKKAKNLQLLLTAGVGSDHIDLNXXXXXGLTVAEVTGSNVVSVAEDELMRILILVRNFLPGHHQVISGEWNVAGVAYR-----AHDLEGKTVGTVGCGRIGKLLLQRLXPFNCNLLYHDRVKMDPQLEKETGAKFEEDLDTMLPKCDIVVVNTPLTEKTRGMFDKDRIAKMKKGVLIANNARGAIMDTQA 903
            +++E P   L K + D+  L++       + +E    A  L+++    VG D+ID+      G+ V         + A+     +L   R  +   H   SGEW   G+A+       +D+ GKT+G VG GRIG+ + +R   F   +LY+ R +  P+ EKE GA+F   L+ +L + D VV+  PLT++T+ M +++R+  MKK  ++ N ARG ++DT+A
Sbjct:   30 EEREIPREVLLKKVRDVDALVT--MLSERIDSEVFDAAPRLRIVANYAVGYDNIDVEEATRRGIYVTNTPDVLTDATADFAWTLLLATARRLIEADHFTRSGEWKRRGIAWHPRWFLGYDVYGKTIGIVGFGRIGQAVARRARGFGMRILYYSRSRK-PEAEKELGAEFRS-LEDLLRESDFVVLAVPLTKETQYMINEERLRLMKKTAILVNIARGKVVDTKA 249          
BLAST of DY258597 vs. ExPASy Swiss-Prot
Match: GYAR_PYRHO (Glyoxylate reductase OS=Pyrococcus horikoshii GN=gyaR PE=1 SV=2)

HSP 1 Score: 112.079 bits (279), Expect = 7.498e-24
Identity = 74/240 (30.83%), Postives = 126/240 (52.50%), Query Frame = 1
Query:  214 LESKGHQYIVTDDKEGPDCELEKHIPDLHVLISTPFHPAYVTAERIKK-----AKNLQLLLTAGVGSDHIDLNXXXXXGLTVAEVTGSNVVSVAEDELMRILILVRNFLPGHHQVISGEWNVAGVAYR-----AHDLEGKTVGTVGCGRIGKLLLQRLXPFNCNLLYHDRVKMDPQLEKETGAKFEEDLDTMLPKCDIVVVNTPLTEKTRGMFDKDRIAKMKKGVLIANNARGAIMDTQA 903
            LE +    +  D+KE P   L K + ++  L++       + +ERI K     A  L+++    VG D+ID+      G+ V         + A+     +L   R+ + G   V SGEW   GVA+       +D+ GKT+G +G GRIG+ + +R   FN  +LY+ R + + ++E+E  A+F+  L+ +L + D VV+  PLT +T  + +++R+  MKK  ++ N ARG ++DT A
Sbjct:   19 LEDEFEVEVWGDEKEIPREILLKKVKEVDALVT-------MLSERIDKEVFENAPKLRIVANYAVGYDNIDIEEATKRGIYVTNTPDVLTDATADLAFALLLATARHVVKGDRFVRSGEWKKRGVAWHPKWFLGYDVYGKTIGIIGLGRIGQAIAKRAKGFNMRILYYSRTRKE-EVERELNAEFKP-LEDLLRESDFVVLAVPLTRETYHLINEERLKLMKKTAILINIARGKVVDTNA 249          
BLAST of DY258597 vs. ExPASy Swiss-Prot
Match: GYAR_PYRFU (Glyoxylate reductase OS=Pyrococcus furiosus GN=gyaR PE=3 SV=1)

HSP 1 Score: 111.309 bits (277), Expect = 1.279e-23
Identity = 70/235 (29.79%), Postives = 123/235 (52.34%), Query Frame = 1
Query:  214 LESKGHQYIVTDDKEGPDCELEKHIPDLHVLISTPFHPAYVTAERIKKAKNLQLLLTAGVGSDHIDLNXXXXXGLTVAEVTGSNVVSVAEDELMRILILVRNFLPGHHQVISGEWNVAGVAYR-----AHDLEGKTVGTVGCGRIGKLLLQRLXPFNCNLLYHDRVKMDPQLEKETGAKFEEDLDTMLPKCDIVVVNTPLTEKTRGMFDKDRIAKMKKGVLIANNARGAIMDTQA 903
            LE +    +  +++E P  +L + + D+  L++       +  E  + A  L+++    VG D+ID+      G+ V         + A+     +L   R+ + G   V SGEW   G+A+       ++L GKT+G VG GRIG+ + +R   FN  +LY+ R +   Q EKE GA++   L+ +L + D V++  PLT++T  M +++R+  MK   ++ N ARG ++DT+A
Sbjct:   19 LEEEFEVEVWEEEREIPREKLLEKVKDVDALVT--MLSERIDQEVFENAPRLRIVANYAVGYDNIDVEEATRRGIYVTNTPDVLTNATADHAFALLLATARHVVKGDKFVRSGEWKRKGIAWHPKWFLGYELYGKTIGIVGFGRIGQAIARRAKGFNMRILYYSRTRKS-QAEKELGAEYRP-LEEVLKESDFVILAVPLTKETMYMINEERLKLMKPTAILVNIARGKVVDTKA 249          
BLAST of DY258597 vs. ExPASy Swiss-Prot
Match: YN14_YEAST (Putative 2-hydroxyacid dehydrogenase YNL274C OS=Saccharomyces cerevisiae GN=YNL274C PE=1 SV=1)

HSP 1 Score: 110.923 bits (276), Expect = 1.670e-23
Identity = 71/185 (38.38%), Postives = 102/185 (55.14%), Query Frame = 1
Query:  388 GVGSDHIDLNXXXXXGLTVAEVTGSNVVSVAEDELMRILILVRNFLPGHHQVISGEWNVAGVAYRA---HDLEGKTVGTVGCGRIGKLLLQRLXPFNC-NLLYHDRVKMDPQLEKETGAKFEEDLDTMLPKCDIVVVNTPLTEKTRGMFDKDRIAKMKKGVLIANNARGAIMDTQAGC*PLLLGK 930
            G G D ID+       + VA V      + A+  +  +L  +RNF  G+ ++I G W  AG A  +   +D EGKTVG +G GRIG+ +L+RL PF   N +YH+R ++    E+E G ++    +  L + DIV VN PL   T  + + + I KMK GV+I N ARGA++D QA    L  GK
Sbjct:   90 GAGYDQIDVEPFKKRHIQVANVPDLVSNATADTHVFLLLGALRNFGIGNRRLIEGNWPEAGPACGSPFGYDPEGKTVGILGLGRIGRCILERLKPFGFENFIYHNRHQLPS--EEEHGCEYV-GFEEFLKRSDIVSVNVPLNHNTHHLINAETIEKMKDGVVIVNTARGAVIDEQAMTDALRSGK 271          
BLAST of DY258597 vs. ExPASy Swiss-Prot
Match: SERA_METJA (D-3-phosphoglycerate dehydrogenase OS=Methanocaldococcus jannaschii GN=serA PE=3 SV=1)

HSP 1 Score: 110.538 bits (275), Expect = 2.182e-23
Identity = 66/211 (31.28%), Postives = 117/211 (55.45%), Query Frame = 1
Query:  271 ELEKHIPDLHVLISTPFHPAYVTAERIKKAKNLQLLLTAGVGSDHIDLNXXXXXGLTVAEVTGSNVVSVAEDELMRILILVRNFLPGHHQVISGEWNVAGVAYRAHDLEGKTVGTVGCGRIGKLLLQRLXPFNCNLLYHDRVKMDPQLEKETGAKFEEDLDTMLPKCDIVVVNTPLTEKTRGMFDKDRIAKMKKGVLIANNARGAIMDTQA 903
            EL + I D  VL+        VT + I+KA+ L+++  AGVG D+ID+      G+ V     ++ +SVAE  +  +L   RN       +  GEW+     ++  +L GKT+G +G GRIG+ +++R   F  N++ +D   +  ++ +  G +  +D++ +  + D + ++ PLT KTR +  +++IA MKK  +I N ARG ++D +A
Sbjct:   34 ELLEKIKDADVLVVRS--GTKVTRDVIEKAEKLKVIGRAGVGVDNIDVEAATEKGIIVVNAPDASSISVAELTMGLMLAAARNIPQATASLKRGEWDRK--RFKGIELYGKTLGVIGLGRIGQQVVKRAKAFGMNIIGYDPY-IPKEVAESMGVELVDDINELCKRADFITLHVPLTPKTRHIIGREQIALMKKNAIIVNCARGGLIDEKA 239          
The following BLAST results are available for this feature:
BLAST of DY258597 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 177
Match NameE-valueIdentityDescription
FDH1_YEAST4.355e-5641.44Formate dehydrogenase 1 OS=Saccharomyces cerevisia... [more]
SERA_BACSU6.782e-2534.87D-3-phosphoglycerate dehydrogenase OS=Bacillus sub... [more]
GYAR_PYRAB6.782e-2530.38Glyoxylate reductase OS=Pyrococcus abyssi GN=gyaR ... [more]
SERA_ARCFU1.157e-2432.70D-3-phosphoglycerate dehydrogenase OS=Archaeoglobu... [more]
GYAR_THEPD2.577e-2433.77Glyoxylate reductase OS=Thermofilum pendens (strai... [more]
GYAR_PYRKO7.498e-2431.25Glyoxylate reductase OS=Pyrococcus kodakaraensis G... [more]
GYAR_PYRHO7.498e-2430.83Glyoxylate reductase OS=Pyrococcus horikoshii GN=g... [more]
GYAR_PYRFU1.279e-2329.79Glyoxylate reductase OS=Pyrococcus furiosus GN=gya... [more]
YN14_YEAST1.670e-2338.38Putative 2-hydroxyacid dehydrogenase YNL274C OS=Sa... [more]
SERA_METJA2.182e-2331.28D-3-phosphoglycerate dehydrogenase OS=Methanocaldo... [more]

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Properties
Property NameValue
Genbank descriptionKN0AAI2CB10FM1 AbsDev1 Citrus clementina cDNA 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DY258597 ID=DY258597; Name=DY258597; organism=Citrus clementina; type=EST; length=1290bp
AATTGGGAGATGGCCATGAAGAGAGTAGCTAGCTCTGCAATTAACGCTTT
TGCTTCGTCGGGATATCTTCGTTCATCGTCGAGGTTTTCTCGACACTATG
CTTCTTCTGGAAGTAAGAAGATTGTTGGGGTGTTCTACAAGGGCAATGAA
TACGCTTCAATGAATCCCAACTTTCTTGGTTGTGTGGAGGGAGGCTGTGG
TCTGCGTGAATGGCTGGAATCGAAAGGTCACCAATATATTGTCACTGATG
ACAAAGAGGGACCAGACTGTGAACTAGAGAAACATATTCCTGATCTCCAC
GTCCTCATATCTACCCCCTTCCACCCTGCCTATGTTACGGCGGAAAGGAT
TAAGAAGGCCAAAAATTTGCAACTGCTTCTCACTGCTGGAGTTGGCTCTG
ATCATATTGATCTAAATGCTGCTGCTGCTGCTGGTTTAACTGTTGCTGAA
GTTACTGGAAGCAATGTGGTTTCAGTTGCTGAGGACGAGCTTATGAGAAT
CCTTATTCTTGTCCGTAATTTCTTACCTGGACACCATCAAGTTATCAGTG
GGGAATGGAATGTTGCCGGTGTTGCTTATAGAGCTCATGATCTTGAAGGA
AAGACAGTGGGAACTGTTGGTTGTGGACGCATTGGCAAGCTGTTGCTCCA
ACGACTTANACCTTTCAATTGTAACCTCCTTTATCATGACCGGGTGAAGA
TGGATCCTCAATTGGAGAAAGAGACTGGAGCAAAATTTGAGGAGGATCTA
GATACTATGCTTCCCAAATGTGACATAGTTGTTGTCAACACCCCTCTAAC
AGAAAAGACGAGAGGGATGTTTGACAAAGATAGGATTGCAAAGATGAAGA
AGGGCGTCTTGATTGCCAACAATGCTCGAGGAGCAATCATGGACACCCAA
GCTGGTTGTTGACCCTTGCTCCTAGGGAAACCATTGGAGGGTTATAGGGG
GGGAGGTTTGGGAATCCCCAAACCCGCCTCCAAAGGACCCTCCCCTGGGG
GTTAACATGGCCAAATTCAGGAAAAGAACCCCCTCTGGTTTTTCGGGGAA
CCCTTTTTGGAGGCCCAACCTACCCTTATGCTGGCGGGGAGATCAAGGGA
ATTTGCTTTGAAAAAAAATTCTTTCCAGGGGGAAAAAAAAATTTTTTCCT
GTTTTTAAAAATTTTACAATAATGGGGGAGGGGGGGGGGGGGGAAGCCCG
GGGGCCCCCCCCCTTCAAATATTCTAAAAATAATATTTTTTTCCCCGGGT
GTTGGTGAAGAGAAAAGAACGAAGGGAAGTGTATCTGTCG
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