DY258597

Overview
NameDY258597
Unique NameDY258597
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length1290
Libraries
Library NameType
AbsDev1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of DY258597 vs. ExPASy Swiss-Prot
Match: DHGY_HYPME (Glycerate dehydrogenase OS=Hyphomicrobium methylovorum PE=1 SV=2)

HSP 1 Score: 83.1889 bits (204), Expect = 3.730e-15
Identity = 50/181 (27.62%), Postives = 85/181 (46.96%), Query Frame = 1
Query:  361 KNLQLLLTAGVGSDHIDLNXXXXXGLTVAEVTGSNVVSVAEDELMRILILVRNFLPGHHQVISGEW-NVAGVAYRAHDLEGKTVGTVGCGRIGKLLLQRLXPFNCNLLYHDRVKMDPQLEKETGAKFEEDLDTMLPKCDIVVVNTPLTEKTRGMFDKDRIAKMKKGVLIANNARGAIMDTQ 900
            +N++ + T  +G DHIDL+     G+ V        V+ AE  ++ +L   R    G   + +  W     +      L+ KT+G  G G IG+ L +R   F+ ++ Y D  +     E    A F + LD++L       +N P T +TR  F+K  I  + +G ++ N ARG ++D +
Sbjct:   68 ENIKCISTYSIGFDHIDLDACKARGIKVGNAPHGVTVATAEIAMLLLLGSARRAGEGEKMIRTRSWPGWEPLELVGEKLDNKTLGIYGFGSIGQALAKRAQGFDMDIDYFDTHRASSSDEASYQATFHDSLDSLLSVSQFFSLNAPSTPETRYFFNKATIKSLPQGAIVVNTARGDLVDNE 248          
BLAST of DY258597 vs. ExPASy Swiss-Prot
Match: CTBP_DROME (C-terminal-binding protein OS=Drosophila melanogaster GN=CtBP PE=1 SV=3)

HSP 1 Score: 83.1889 bits (204), Expect = 3.730e-15
Identity = 55/199 (27.64%), Postives = 95/199 (47.74%), Query Frame = 1
Query:  319 FHPAYVTAERIKKAKNLQLLLTAGVGSDHIDLNXXXXXGLTVAEVTGSNVVSVAEDELMRILILVRNF-----LPGHHQVISGEWNVAGVAYRAHDLEGKTVGTVGCGRIGKLLLQRLXPFNCNLLYHDRVKMDPQLEKETGAKFEEDLDTMLPKCDIVVVNTPLTEKTRGMFDKDRIAKMKKGVLIANNARGAIMDTQ 900
            +H   +T E ++K K L++++  G G+D+ID+      G+ V  V G  V  VA+  +  IL L R       +    +  +G   V   A+    + G T+G VG GRIG  +  R   F  N++++D    D  ++K  G      L  +L + D V ++  L E    + ++  I +M+ G  + N ARG ++D +
Sbjct:   76 WHTIILTKEDLEKFKALRIIVRIGSGTDNIDVKAAGELGIAVCNVPGYGVEEVADTTMCLILNLYRRTYWLANMVREGKKFTGPEQVREAAHGCARIRGDTLGLVGLGRIGSAVALRAKAFGFNVIFYDPYLPD-GIDKSLGLTRVYTLQDLLFQSDCVSLHCTLNEHNHHLINEFTIKQMRPGAFLVNTARGGLVDDE 273          
BLAST of DY258597 vs. ExPASy Swiss-Prot
Match: GHRB_SERP5 (Glyoxylate/hydroxypyruvate reductase B OS=Serratia proteamaculans (strain 568) GN=ghrB PE=3 SV=1)

HSP 1 Score: 82.8037 bits (203), Expect = 4.872e-15
Identity = 55/187 (29.41%), Postives = 95/187 (50.80%), Query Frame = 1
Query:  349 IKKAKNLQLLLTAGVGSDHIDLNXXXXXGLTVAEVTGSNVVSVAEDELMRILILVRNFLPGHHQVISGEWNVA-GVAYRAHDLEGKTVGTVGCGRIGKLLLQRLX-PFNCNLLYHDRVKMDPQLEKETGAKFEEDLDTMLPKCDIVVVNTPLTEKTRGMFDKDRIAKMKKGVLIANNARGAIMDTQA 903
            +++   L+   T  VG D+ D++      + +         +VA+  +  +L   R  +    +V +GEW  + G  +   D+  KT+G +G GRIG  L QR    F   +LY+ R +   + E+   A+   DLDT+L + D + +  PLT++T  M  +D++AKMKK  ++ N  RG ++D  A
Sbjct:   61 LQQTPKLRAASTISVGYDNFDVDALNAHNVLLMHTPTVLTETVADTIMSLVLATARRVVEVAERVKAGEWQGSIGADWFGVDVHHKTIGILGMGRIGLALAQRAHFGFGMPVLYNAR-RTHEEAEQRFNAR-RCDLDTLLAESDFICITLPLTDETFHMISRDQLAKMKKSGILINAGRGPVVDEAA 245          
BLAST of DY258597 vs. ExPASy Swiss-Prot
Match: Y2305_STAAM (Putative 2-hydroxyacid dehydrogenase SAV2305 OS=Staphylococcus aureus (strain Mu50 / ATCC 700699) GN=SAV2305 PE=1 SV=1)

HSP 1 Score: 82.0333 bits (201), Expect = 8.310e-15
Identity = 51/191 (26.70%), Postives = 94/191 (49.21%), Query Frame = 1
Query:  334 VTAERIKKAKNLQLLLTAGVGSDHIDLNXXXXXGLTVAEVTGSNVVSVAEDELMRILILVRNFLPGHH-QVISGEWNVAGVAYRAHDLEGKTVGTVGCGRIGKLLLQRLXPFNCNLLYHDRVKMDPQLEKETGAKFEEDLDTMLPKCDIVVVNTPLTEKTRGMFDKDRIAKMKKGVLIANNARGAIMDTQA 903
            V  + I   K+L+++   G G ++ID+       + V     ++  + A+  +  +L + R  + G      +G    A + +R  ++ GKT+G +G G IG  + +R   F+ ++LY    + + + E+E GAK+  DLDT+L   D + +N     K   + D ++   MK  V + N +RG I+  QA
Sbjct:   56 VDKDVIDAGKDLKIIANYGAGFNNIDIEYAREKSIDVTNTPKASTNATADLTIGLVLAVARRIVEGDQLSRTTGFDGWAPLFFRGREVSGKTIGIIGLGEIGSAVARRARAFDMDVLYTGPNRKE-EKEREIGAKY-VDLDTLLKNADFITINAAYNPKMHHLIDTEQFKMMKSTVYLINASRGPIVHEQA 244          
BLAST of DY258597 vs. ExPASy Swiss-Prot
Match: Y2098_STAAN (Putative 2-hydroxyacid dehydrogenase SA2098 OS=Staphylococcus aureus (strain N315) GN=SA2098 PE=1 SV=1)

HSP 1 Score: 82.0333 bits (201), Expect = 8.310e-15
Identity = 51/191 (26.70%), Postives = 94/191 (49.21%), Query Frame = 1
Query:  334 VTAERIKKAKNLQLLLTAGVGSDHIDLNXXXXXGLTVAEVTGSNVVSVAEDELMRILILVRNFLPGHH-QVISGEWNVAGVAYRAHDLEGKTVGTVGCGRIGKLLLQRLXPFNCNLLYHDRVKMDPQLEKETGAKFEEDLDTMLPKCDIVVVNTPLTEKTRGMFDKDRIAKMKKGVLIANNARGAIMDTQA 903
            V  + I   K+L+++   G G ++ID+       + V     ++  + A+  +  +L + R  + G      +G    A + +R  ++ GKT+G +G G IG  + +R   F+ ++LY    + + + E+E GAK+  DLDT+L   D + +N     K   + D ++   MK  V + N +RG I+  QA
Sbjct:   56 VDKDVIDAGKDLKIIANYGAGFNNIDIEYAREKSIDVTNTPKASTNATADLTIGLVLAVARRIVEGDQLSRTTGFDGWAPLFFRGREVSGKTIGIIGLGEIGSAVARRARAFDMDVLYTGPNRKE-EKEREIGAKY-VDLDTLLKNADFITINAAYNPKMHHLIDTEQFKMMKSTVYLINASRGPIVHEQA 244          
BLAST of DY258597 vs. ExPASy Swiss-Prot
Match: GHRB_ENT38 (Glyoxylate/hydroxypyruvate reductase B OS=Enterobacter sp. (strain 638) GN=ghrB PE=3 SV=1)

HSP 1 Score: 82.0333 bits (201), Expect = 8.310e-15
Identity = 57/187 (30.48%), Postives = 95/187 (50.80%), Query Frame = 1
Query:  349 IKKAKNLQLLLTAGVGSDHIDLNXXXXXGLTVAEVTGSNVVSVAEDELMRILILVRNFLPGHHQVISGEWNVA-GVAYRAHDLEGKTVGTVGCGRIGKLLLQRLX-PFNCNLLYHDRVKMDPQLEKETGAKFEEDLDTMLPKCDIVVVNTPLTEKTRGMFDKDRIAKMKKGVLIANNARGAIMDTQA 903
            ++K   L+   T  VG D+ D++      + +     +   +VA+  +  +L   R  +    +V +GEW  + G  +   D+ GKT+G VG GRIG  L QR    FN  +LY+ R +   + E+   A++ E L+T+L + D V +  PLT++T  +  K    KMKK  +  N  RG ++D +A
Sbjct:   61 LEKMPKLRATSTISVGYDNFDVDALNTRKILLMHTPYALTETVADTLMALVLSTARRVVEVAERVKAGEWTKSIGPDWFGVDVHGKTLGIVGMGRIGLALAQRAHFGFNMPILYNAR-RHHSEAEERFEARYCE-LETLLQEADYVCLILPLTDETHHLIGKAEFEKMKKSAIFINAGRGPVVDEKA 245          
BLAST of DY258597 vs. ExPASy Swiss-Prot
Match: Y606_STAS1 (Putative 2-hydroxyacid dehydrogenase SSP0606 OS=Staphylococcus saprophyticus subsp. saprophyticus (strain ATCC 15305 / DSM 20229) GN=SSP0606 PE=3 SV=1)

HSP 1 Score: 81.2629 bits (199), Expect = 1.417e-14
Identity = 60/214 (28.04%), Postives = 98/214 (45.79%), Query Frame = 1
Query:  274 LEKHIPDLHVLISTPFHPAYVTAERIKKAKNLQLLLTAGVGSDHIDLNXXXXXGLTVAEVTGSNVVSVAEDELMRILILVRNFLPGHHQV-ISGEWNVAGVAYRAHDLEGKTVGTVGCGRIGKLLLQRLXPFNCNLLY---HDRVKMDPQLEKETGAKFEEDLDTMLPKCDIVVVNTPLTEKTRGMFDKDRIAKMKKGVLIANNARGAIMDTQA 903
            L++ + D   LIS       V  E I  A NL+++   G G +++D++      + V     ++  S AE     +L + R    G      +G    A + +R  ++ GKT+G +G G IG  + +R   F+ N+LY   H +V      E+E GAK+  DL+T+L   D V +N           DK +   MK    + N +RG I+  +A
Sbjct:   39 LKQGVKDADALIS--LLSTSVDKEVIDAANNLKIITNYGAGFNNVDIDYARQQNIDVTNTPKASTNSTAELTFALVLAVARRIPEGDKLCRTTGFDGWAPLFFRGREVSGKTIGIIGLGEIGSAVARRAKAFDMNILYTGPHQKV----DKEREIGAKY-VDLETLLKNADFVTINAAYNPSLHHQIDKAQFEMMKPTSYLINASRGPIVHEKA 245          
BLAST of DY258597 vs. ExPASy Swiss-Prot
Match: Y2389_STAAR (Putative 2-hydroxyacid dehydrogenase SAR2389 OS=Staphylococcus aureus (strain MRSA252) GN=SAR2389 PE=3 SV=1)

HSP 1 Score: 81.2629 bits (199), Expect = 1.417e-14
Identity = 56/211 (26.54%), Postives = 100/211 (47.39%), Query Frame = 1
Query:  274 LEKHIPDLHVLISTPFHPAYVTAERIKKAKNLQLLLTAGVGSDHIDLNXXXXXGLTVAEVTGSNVVSVAEDELMRILILVRNFLPGHH-QVISGEWNVAGVAYRAHDLEGKTVGTVGCGRIGKLLLQRLXPFNCNLLYHDRVKMDPQLEKETGAKFEEDLDTMLPKCDIVVVNTPLTEKTRGMFDKDRIAKMKKGVLIANNARGAIMDTQA 903
            L K + D   LIS       V  + I   K+L+++   G G ++ID+       + V     ++  + A+  +  +L + R  + G      +G    A + +R  ++ GKT+G +G G IG  + +R   F+ ++LY    + + + E+E GAK+  DLDT+L   D + +N     K   + D ++   MK    + N +RG I+  QA
Sbjct:   38 LIKGVKDATALIS--LLSTNVDKDVIDAGKDLKIIANYGAGFNNIDIEYAREKSIDVTNTPKASTNATADLTIGLVLAVARRIVEGDQLSRTTGFDGWAPLFFRGREVSGKTIGIIGLGEIGSAVARRARAFDMDVLYTGPNRKE-EKEREIGAKY-VDLDTLLKNADFITINAAYNPKMHHLIDTEQFKMMKSTAYLINASRGPIVHEQA 244          
BLAST of DY258597 vs. ExPASy Swiss-Prot
Match: DDH_HAEIN (2-hydroxyacid dehydrogenase homolog OS=Haemophilus influenzae GN=ddh PE=3 SV=1)

HSP 1 Score: 81.2629 bits (199), Expect = 1.417e-14
Identity = 51/182 (28.02%), Postives = 98/182 (53.85%), Query Frame = 1
Query:  358 AKNLQLLLTAGVGSDHIDLNXXXXXGLTVAEVTGSNVVSVAEDELMRILILVRNFLPGHHQVISGEWNVAGVAYRAHDLEGKTVGTVGCGRIGKLLLQRLXPFNCNLLYHDRVKMDPQLEKETGAKFEEDLDTMLPKCDIVVVNTPLTEKTRGMFDKDRIAKMKKGVLIANNARGAIMDTQA 903
            A  ++++     G +++DL      G+ V  V   +  +VAE  +  ++ L R     + +     +++ G+     ++ G+TVG +G G+IG  +++ L  F  N+L +D  K +P +E E G ++ E LD +  K  ++ ++ P T +   + + +  AKMK GV+I N +RG+++DTQA
Sbjct:   66 ALGVKIVALRCAGFNNVDLKAAQELGIQVVRVPAYSPEAVAEHTIGLMMTLNRRIHRAYQRTREANFSLEGLI--GFNMYGRTVGVIGTGKIGIAVMRILKGFGMNILAYDPFK-NPVVE-ELGGQYVE-LDELYAKSHVITLHCPATPENYHLLNCEAFAKMKDGVMIVNTSRGSLIDTQA 242          
BLAST of DY258597 vs. ExPASy Swiss-Prot
Match: Y2178_STAAB (Putative 2-hydroxyacid dehydrogenase SAB2178 OS=Staphylococcus aureus (strain bovine RF122 / ET3-1) GN=SAB2178 PE=3 SV=1)

HSP 1 Score: 80.8777 bits (198), Expect = 1.851e-14
Identity = 50/191 (26.18%), Postives = 93/191 (48.69%), Query Frame = 1
Query:  334 VTAERIKKAKNLQLLLTAGVGSDHIDLNXXXXXGLTVAEVTGSNVVSVAEDELMRILILVRNFLPGHH-QVISGEWNVAGVAYRAHDLEGKTVGTVGCGRIGKLLLQRLXPFNCNLLYHDRVKMDPQLEKETGAKFEEDLDTMLPKCDIVVVNTPLTEKTRGMFDKDRIAKMKKGVLIANNARGAIMDTQA 903
            V  + I   K+L+++   G G ++ID+       + V     ++  + A+  +  +L + R  + G      +G    A + +R  ++ GKT+G +G G IG  + +R   F+ ++LY    + + + E+E GAK+  DLDT+L   D + +N     K   + D ++   MK    + N +RG I+  QA
Sbjct:   56 VDKDVIDAGKDLKIIANYGAGFNNIDIEYAREKSIDVTNTPKASTNATADLTIGLVLAIARRIVEGDQLSRTTGFDGWAPLFFRGREVSGKTIGIIGLGEIGSAVARRARAFDMDVLYTGPNRKE-EKEREIGAKY-VDLDTLLKNADFITINAAYNPKMHHLIDTEQFKMMKSTAYLINASRGPIVHEQA 244          
The following BLAST results are available for this feature:
BLAST of DY258597 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 177
Match NameE-valueIdentityDescription
DHGY_HYPME3.730e-1527.62Glycerate dehydrogenase OS=Hyphomicrobium methylov... [more]
CTBP_DROME3.730e-1527.64C-terminal-binding protein OS=Drosophila melanogas... [more]
GHRB_SERP54.872e-1529.41Glyoxylate/hydroxypyruvate reductase B OS=Serratia... [more]
Y2305_STAAM8.310e-1526.70Putative 2-hydroxyacid dehydrogenase SAV2305 OS=St... [more]
Y2098_STAAN8.310e-1526.70Putative 2-hydroxyacid dehydrogenase SA2098 OS=Sta... [more]
GHRB_ENT388.310e-1530.48Glyoxylate/hydroxypyruvate reductase B OS=Enteroba... [more]
Y606_STAS11.417e-1428.04Putative 2-hydroxyacid dehydrogenase SSP0606 OS=St... [more]
Y2389_STAAR1.417e-1426.54Putative 2-hydroxyacid dehydrogenase SAR2389 OS=St... [more]
DDH_HAEIN1.417e-1428.022-hydroxyacid dehydrogenase homolog OS=Haemophilus... [more]
Y2178_STAAB1.851e-1426.18Putative 2-hydroxyacid dehydrogenase SAB2178 OS=St... [more]

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Properties
Property NameValue
Genbank descriptionKN0AAI2CB10FM1 AbsDev1 Citrus clementina cDNA 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DY258597 ID=DY258597; Name=DY258597; organism=Citrus clementina; type=EST; length=1290bp
AATTGGGAGATGGCCATGAAGAGAGTAGCTAGCTCTGCAATTAACGCTTT
TGCTTCGTCGGGATATCTTCGTTCATCGTCGAGGTTTTCTCGACACTATG
CTTCTTCTGGAAGTAAGAAGATTGTTGGGGTGTTCTACAAGGGCAATGAA
TACGCTTCAATGAATCCCAACTTTCTTGGTTGTGTGGAGGGAGGCTGTGG
TCTGCGTGAATGGCTGGAATCGAAAGGTCACCAATATATTGTCACTGATG
ACAAAGAGGGACCAGACTGTGAACTAGAGAAACATATTCCTGATCTCCAC
GTCCTCATATCTACCCCCTTCCACCCTGCCTATGTTACGGCGGAAAGGAT
TAAGAAGGCCAAAAATTTGCAACTGCTTCTCACTGCTGGAGTTGGCTCTG
ATCATATTGATCTAAATGCTGCTGCTGCTGCTGGTTTAACTGTTGCTGAA
GTTACTGGAAGCAATGTGGTTTCAGTTGCTGAGGACGAGCTTATGAGAAT
CCTTATTCTTGTCCGTAATTTCTTACCTGGACACCATCAAGTTATCAGTG
GGGAATGGAATGTTGCCGGTGTTGCTTATAGAGCTCATGATCTTGAAGGA
AAGACAGTGGGAACTGTTGGTTGTGGACGCATTGGCAAGCTGTTGCTCCA
ACGACTTANACCTTTCAATTGTAACCTCCTTTATCATGACCGGGTGAAGA
TGGATCCTCAATTGGAGAAAGAGACTGGAGCAAAATTTGAGGAGGATCTA
GATACTATGCTTCCCAAATGTGACATAGTTGTTGTCAACACCCCTCTAAC
AGAAAAGACGAGAGGGATGTTTGACAAAGATAGGATTGCAAAGATGAAGA
AGGGCGTCTTGATTGCCAACAATGCTCGAGGAGCAATCATGGACACCCAA
GCTGGTTGTTGACCCTTGCTCCTAGGGAAACCATTGGAGGGTTATAGGGG
GGGAGGTTTGGGAATCCCCAAACCCGCCTCCAAAGGACCCTCCCCTGGGG
GTTAACATGGCCAAATTCAGGAAAAGAACCCCCTCTGGTTTTTCGGGGAA
CCCTTTTTGGAGGCCCAACCTACCCTTATGCTGGCGGGGAGATCAAGGGA
ATTTGCTTTGAAAAAAAATTCTTTCCAGGGGGAAAAAAAAATTTTTTCCT
GTTTTTAAAAATTTTACAATAATGGGGGAGGGGGGGGGGGGGGAAGCCCG
GGGGCCCCCCCCCTTCAAATATTCTAAAAATAATATTTTTTTCCCCGGGT
GTTGGTGAAGAGAAAAGAACGAAGGGAAGTGTATCTGTCG
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