DY258597

Overview
NameDY258597
Unique NameDY258597
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length1290
Libraries
Library NameType
AbsDev1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of DY258597 vs. ExPASy Swiss-Prot
Match: GHRB_PECCP (Glyoxylate/hydroxypyruvate reductase B OS=Pectobacterium carotovorum subsp. carotovorum (strain PC1) GN=ghrB PE=3 SV=1)

HSP 1 Score: 79.7221 bits (195), Expect = 4.124e-14
Identity = 62/209 (29.67%), Postives = 101/209 (48.33%), Query Frame = 1
Query:  322 HPAYVTAERI------------KKAKNLQLLLTAGVGSDHIDLNXXXXXGLTVAEVTGSNVVSVAEDELMRILILVRNFLPGHHQVISGEWNVAGVA--YRAHDLEGKTVGTVGCGRIGKLLLQRLX-PFNCNLLYHDRVKMDPQLEKETGAKFEEDLDTMLPKCDIVVVNTPLTEKTRGMFDKDRIAKMKKGVLIANNARGAIMDTQA 903
            HPA  TAE I            + A  L+   T  VG D  +++     G+ +         +VA+  L  +L   R  +    +V +GEW   GV   +   D+  KT+G +G GRIG  + QR    F+  +LY+ R +   + E+   A+   DLDT+L + D + +  PLT +T  +  ++++AKMK   ++ N  RGA++D  A
Sbjct:   36 HPALATAEGIIGSGGKVDKDFLQHAPRLRAASTISVGYDTFNVDALNEKGVILMHTPTVLTETVADTVLALMLASARRVVEVAERVKAGEWK-GGVDSDWFGTDVHHKTIGILGMGRIGLAVAQRAHFGFSMPVLYNAR-RHHAEAEQRFNAR-HCDLDTLLAESDFLCITLPLTTETHHLIGREQLAKMKPSAILINIGRGAVVDEDA 241          
BLAST of DY258597 vs. ExPASy Swiss-Prot
Match: YOAD_BACSU (Putative 2-hydroxyacid dehydrogenase yoaD OS=Bacillus subtilis GN=yoaD PE=2 SV=1)

HSP 1 Score: 79.337 bits (194), Expect = 5.386e-14
Identity = 45/170 (26.47%), Postives = 86/170 (50.59%), Query Frame = 1
Query:  403 HIDLNXXXXXGLTVAEVTGSNVVSVAEDELMRILILVRNFLPGHHQVISGEWNV----AGVAYRAHDLEGKTVGTVGCGRIGKLLLQRLXPFNCNLLYHDRVKMDPQLEKETGAKFEEDLDTMLPKCDIVVVNTPLTEKTRGMFDKDRIAKMKKGVLIANNARGAIMDTQ 900
            ++D+      G+ V    G N  +VAE  +  ++  +R+    +  +  GEW+     A V ++ ++L GKTVG +G G +G+ + + L  F+C + Y+     DP ++ +     +  L T+    DIV V+ P TE+T G+ D+     MK+  +  N +R  +++ +
Sbjct:   94 NVDVAAASKRGIPVFYTPGRNAQAVAEMFIGNVISFLRHTSASNQWLKDGEWDSDYLQAYVKFKGNELTGKTVGMIGFGAVGQRIAKLLTAFDCKIKYY-----DPYIQDDHPLYEKASLKTVFSDSDIVSVHLPRTEETLGLIDRQYFDLMKESAIFVNTSRAVVVNRE 258          
BLAST of DY258597 vs. ExPASy Swiss-Prot
Match: Y752_STAHJ (Putative 2-hydroxyacid dehydrogenase SH0752 OS=Staphylococcus haemolyticus (strain JCSC1435) GN=SH0752 PE=3 SV=1)

HSP 1 Score: 79.337 bits (194), Expect = 5.386e-14
Identity = 51/191 (26.70%), Postives = 88/191 (46.07%), Query Frame = 1
Query:  334 VTAERIKKAKNLQLLLTAGVGSDHIDLNXXXXXGLTVAEVTGSNVVSVAEDELMRILILVRNFLPGHH-QVISGEWNVAGVAYRAHDLEGKTVGTVGCGRIGKLLLQRLXPFNCNLLYHDRVKMDPQLEKETGAKFEEDLDTMLPKCDIVVVNTPLTEKTRGMFDKDRIAKMKKGVLIANNARGAIMDTQA 903
            V  E I  A NL+++   G G +++D+       + V     ++  S AE     +L + R  + G       G    A + +R  ++ GKT+G +G G IG  + +R   F+ ++LY        + E+E GAK+  DL+T+L   D + +N         M D ++   MK    + N  RG I++ +A
Sbjct:   56 VDQEVIDSASNLKIIANYGAGFNNVDVKYAREKDIDVTNTPKASTASTAELTFGLVLAVARRIVEGDKLSRTQGFDGWAPLFFRGREVSGKTIGIIGLGEIGSAVAKRAKAFDMDILY-TGPHQKKEKEREIGAKY-VDLNTLLENADFITINAAYNPDLHHMIDTEQFKLMKSTAYLINAGRGPIVNEEA 244          
BLAST of DY258597 vs. ExPASy Swiss-Prot
Match: DDH_ZYMMO (2-hydroxyacid dehydrogenase homolog OS=Zymomonas mobilis GN=ddh PE=3 SV=3)

HSP 1 Score: 79.337 bits (194), Expect = 5.386e-14
Identity = 56/194 (28.87%), Postives = 99/194 (51.03%), Query Frame = 1
Query:  367 LQLLLTAGVGSDHIDLNXXXXXGLTVAEVTGSNVVSVAEDELMRILILVRNFLPGHHQVISGEWNVAGVAYRAHDLEGKTVGTVGCGRIGKLLLQRLXP-FNCNLLYHDRVKMDPQLEKETGAKFEEDLDTMLPKCDIVVVNTPLTEKTRGMFDKDRIAKMKKGVLIANNARGAIMDTQAGC*PLLLGKPLEGY 945
            ++L+     G +++DL+      + V  V   +  SVAE  +  +L L R    G  +V    +++ G+     D+  KTVG +G G IG +    +   F  N++ + +   DP+L K+ G +F   LD ++   DI+ ++ PLT +   M +++ +A+ KKG  + N +RG ++DT+A     L  K L GY
Sbjct:   69 IKLVALRCAGYNNVDLDAAKKLNIKVVRVPAYSPYSVAEYAVGMLLTLNRQISRGLKRVRENNFSLEGLI--GLDVHDKTVGIIGVGHIGSVFAHIMTHGFGANVIAY-KPHPDPELAKKVGFRFTS-LDEVIETSDIISLHCPLTPENHHMINEETLARAKKGFYLVNTSRGGLVDTKAVI-KSLKAKHLGGY 257          
BLAST of DY258597 vs. ExPASy Swiss-Prot
Match: VANH_ENTFC (D-specific alpha-keto acid dehydrogenase OS=Enterococcus faecium GN=vanH PE=1 SV=1)

HSP 1 Score: 78.9518 bits (193), Expect = 7.035e-14
Identity = 62/201 (30.85%), Postives = 95/201 (47.26%), Query Frame = 1
Query:  355 KAKNLQLLLTAGVGSDHIDLNXXXXXGLTVAEVTGSNVVSVAEDELMRILILVRNFLPGHHQVISGEWNVAGVAYRAHDLEGKTVGTVGCGRIGKLLLQRLXPFNCNLLYHDRVKMDPQLEKETGAKFEEDLDTMLPKCDIVVVNTPLTEKTRGMFDKDRIAKMKKGVLIANNARGAIMDTQAGC*PLLLGKPLEGYRGGG 957
            K   ++ + T  +G +HID       G+TV  V  S   SVA+  +M IL+ VRN       V   ++ +   + R   L   TVG VG G+IGK +++RL  F C +L + R +    +E           D +L   DIV ++ PL   T  +   ++I +MK+G  + N  RG ++DT        L K LE  + GG
Sbjct:   68 KRAGVKYISTRSIGCNHIDTTAAKRMGITVDNVAYSPD-SVADYTMMLILMAVRNVKSIVRSVEKHDFRLD--SDRGKVLSDMTVGVVGTGQIGKAVIERLRGFGCKVLAYSRSR---SIEVNY-----VPFDELLQNSDIVTLHVPLNTDTHYIISHEQIQRMKQGAFLINTGRGPLVDTYE------LVKALENGKLGG 251          
BLAST of DY258597 vs. ExPASy Swiss-Prot
Match: PDXB_PSEHT (Erythronate-4-phosphate dehydrogenase OS=Pseudoalteromonas haloplanktis (strain TAC 125) GN=pdxB PE=3 SV=1)

HSP 1 Score: 77.411 bits (189), Expect = 2.047e-13
Identity = 58/194 (29.90%), Postives = 84/194 (43.30%), Query Frame = 1
Query:  334 VTAERIKKAKNLQLLLTAGVGSDHIDLNXXXXXGLTVAEVTGSNVVSVAEDELMRILILVRNFLPGHHQVISGEWNVAGVAYRAHDLEGKTVGTVGCGRIGKLLLQRLXPFNCNLLYHDRVKMDPQLEKETGAKFEEDLDTMLPKCDIVVVNTPLTE----KTRGMFDKDRIAKMKKGVLIANNARGAIMDTQA 903
            V  E +  A  L  + TA +G DHID        +  +   G N ++VAE  +  +  L +                      A  L  +T+G VG G IG  L Q+L   N  +L  D +K    L  E  A     LD +L + DIV  + PL +    KT  M DK R+  +K G+ + N +RG ++D QA
Sbjct:   49 VNNELLAHANKLSFVGTATIGVDHIDTQLLNDKNIAFSSAPGCNAIAVAEYVISSLYALSQE--------------------NARPLNNQTIGIVGVGSIGSCLAQKLQALNLTVLLCDPIKHAQGLLNEHVA-----LDQLLAQSDIVTFHVPLIKSGEHKTLHMMDKARLKALKPGLTLINASRGDVIDNQA 217          
BLAST of DY258597 vs. ExPASy Swiss-Prot
Match: LDHD_ECOLI (D-lactate dehydrogenase OS=Escherichia coli (strain K12) GN=ldhA PE=1 SV=1)

HSP 1 Score: 77.0258 bits (188), Expect = 2.673e-13
Identity = 52/187 (27.81%), Postives = 94/187 (50.27%), Query Frame = 1
Query:  343 ERIKKAKNLQLLLTAGVGSDHIDLNXXXXXGLTVAEVTGSNVVSVAEDELMRILILVRNFLPGHHQVISGEWNVAGVAYRAHDLEGKTVGTVGCGRIGKLLLQRLXPFNCNLLYHDRVKMDPQLEKETGAKFEEDLDTMLPKCDIVVVNTPLTEKTRGMFDKDRIAKMKKGVLIANNARGAIMDTQA 903
            E +KK   ++ +     G +++DL+     GL V  V   +  +VAE  +  ++ L R     + +     +++ G+      + GKT G +G G+IG  +L+ L  F   LL  D       LE   G ++  DL T+  + D++ ++ PLT +   + ++    +MK GV+I N +RGA++D+QA
Sbjct:   62 EELKK-HGVKYIALRCAGFNNVDLDAAKELGLKVVRVPAYDPEAVAEHAIGMMMTLNRRIHRAYQRTRDANFSLEGLT--GFTMYGKTAGVIGTGKIGVAMLRILKGFGMRLLAFDPYPSAAALE--LGVEYV-DLPTLFSESDVISLHCPLTPENYHLLNEAAFEQMKNGVMIVNTSRGALIDSQA 242          
BLAST of DY258597 vs. ExPASy Swiss-Prot
Match: TKRA_BACSU (Probable 2-ketogluconate reductase OS=Bacillus subtilis GN=yvcT PE=3 SV=1)

HSP 1 Score: 76.2554 bits (186), Expect = 4.560e-13
Identity = 66/246 (26.83%), Postives = 114/246 (46.34%), Query Frame = 1
Query:  232 QYIVTDDKEGPDCELEKHIPDLHVLISTPFHPAYVTAERIKKAKNLQLLLTAGVGSDHIDLNXXXXXGLTVAEVTGSNVVSVAEDELMRILILVRNFLPGHHQVISGEWN-VAGVAYRAHDLEGKTVGTVGCGRIGKLLLQRLX-PFNCNLLYHDRVKMDPQLEKETGAKFEEDLDTMLPKCDIVVVNTPLTEKTRGMFDKDRIAKMKKGVLIANNARGAIMDTQAGC*PLLLGKPLEGY-RGGGL 960
            +Y V  +   P   L + + +   L+++      +  E ++ A  L+++    VG D+ D+      G+       +   +VA+     IL   R        V +G+W  V   A    D+  +T+G +G GRIG+   +R    F+  +LYH+R +   + E   G K+ E LDT+L + D +++ TPLT++T  M  +     MK   +  N +RG  +D +A     L+    EG+ RG GL
Sbjct:   25 RYEVWQEDTLPSDVLFEKLKEAEGLLTSGTSGPSINRELLEHAPKLKVVSNQSVGYDNFDIEAMKERGVVGTHTPYTLDDTVADLAFSLILSSARRVAELDRFVRAGKWGTVEEEALFGIDVHHQTLGIIGMGRIGEQAARRAKFGFDMEVLYHNRHRKQ-ETEDSIGVKYAE-LDTLLEQSDFILLITPLTDETYHMIGEREFKLMKNSAIFVNISRGKTVDEKA-----LIRALQEGWIRGAGL 263          
BLAST of DY258597 vs. ExPASy Swiss-Prot
Match: SERA_SYNY3 (D-3-phosphoglycerate dehydrogenase OS=Synechocystis sp. (strain PCC 6803) GN=serA PE=3 SV=1)

HSP 1 Score: 75.8702 bits (185), Expect = 5.955e-13
Identity = 52/193 (26.94%), Postives = 90/193 (46.63%), Query Frame = 1
Query:  334 VTAERIKKAKNLQLLLTAGVGSDHIDLNXXXXXGLTVAEVTGSNVVSVAEDELMRILILVRNFLPGHHQVISGEWNVAGVAYRAHDLEGKTVGTVGCGRIGKLLLQRLXPFNCNLLYHDRVKMDPQLEKETGAKFE---EDLDTMLPKCDIVVVNTPLTEKTRGMFDKDRIAKMKKGVLIANNARGAIMDTQA 903
            VT + I+    L+++  AGVG D+ID+      G+ V      N ++ AE  L  ++ L R+    +  V   +W      +   ++  KT+G VG G+IG  +          LL +D     P + +E   +      DLD +  + D + ++ P T +T  + + + +AKMK    I N +RG I+D +A
Sbjct:   81 VTEKIIQAGSQLKIIGRAGVGVDNIDVPAATRQGIVVVNSPEGNTIAAAEHALAMMMALARHIPDANKSVKESKWERK--QFIGTEVYKKTLGVVGLGKIGSHVAGVAKAMGMKLLAYD-----PFISQERADQIGCTLVDLDLLFSEADFITLHIPKTPETANLINAETLAKMKPTARIINCSRGGIIDEEA 266          
BLAST of DY258597 vs. ExPASy Swiss-Prot
Match: LDHD_LACPE (D-lactate dehydrogenase OS=Lactobacillus pentosus PE=1 SV=1)

HSP 1 Score: 75.8702 bits (185), Expect = 5.955e-13
Identity = 65/243 (26.75%), Postives = 116/243 (47.74%), Query Frame = 1
Query:  235 YIVTDD---------KEGPDCELEKHIPDL----HVLISTPFHPAYVTAERIKKAKNLQLLLTAGV--------GSDHIDLNXXXXXGLTVAEVTGSNVVSVAEDELMRILILVRNFLPGHHQVISGEWNVAGVAYRAHDLEGKTVGTVGCGRIGKLLLQRLXPFNCNLLYHDRVKMDPQLEKETGAKFEEDLDTMLPKCDIVVVNTPLTEKTRGMFDKDRIAKMKKGVLIANNARGAIMDTQ 900
            Y V DD         KE PD E+ K +P+L    +V ++  F  A V  ++   A+ L  L   GV        G D++D+      GL ++ V   +  ++AE  + +++ L+R     + ++   ++  A     A +L   TVG +G GRIG+  +     F   ++ +D V  + +LEKE    + + LD +  + D++ ++ P  +    M + D  +KMK G  I N ARG ++D++
Sbjct:    6 YAVRDDERPFFDTWMKENPDVEV-KLVPELLTEDNVDLAKGFDGADVYQQKDYTAEVLNKLADEGVKNISLRNVGVDNLDVPTVKARGLNISNVPAYSPNAIAELSVTQLMQLLRQTPMFNKKLAKQDFRWAPDI--AKELNTMTVGVIGTGRIGRAAIDIFKGFGAKVIGYD-VYRNAELEKE--GMYVDTLDELYAQADVITLHVPALKDNYHMLNADAFSKMKDGAYILNFARGTLIDSE 242          
The following BLAST results are available for this feature:
BLAST of DY258597 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 177
Match NameE-valueIdentityDescription
GHRB_PECCP4.124e-1429.67Glyoxylate/hydroxypyruvate reductase B OS=Pectobac... [more]
YOAD_BACSU5.386e-1426.47Putative 2-hydroxyacid dehydrogenase yoaD OS=Bacil... [more]
Y752_STAHJ5.386e-1426.70Putative 2-hydroxyacid dehydrogenase SH0752 OS=Sta... [more]
DDH_ZYMMO5.386e-1428.872-hydroxyacid dehydrogenase homolog OS=Zymomonas m... [more]
VANH_ENTFC7.035e-1430.85D-specific alpha-keto acid dehydrogenase OS=Entero... [more]
PDXB_PSEHT2.047e-1329.90Erythronate-4-phosphate dehydrogenase OS=Pseudoalt... [more]
LDHD_ECOLI2.673e-1327.81D-lactate dehydrogenase OS=Escherichia coli (strai... [more]
TKRA_BACSU4.560e-1326.83Probable 2-ketogluconate reductase OS=Bacillus sub... [more]
SERA_SYNY35.955e-1326.94D-3-phosphoglycerate dehydrogenase OS=Synechocysti... [more]
LDHD_LACPE5.955e-1326.75D-lactate dehydrogenase OS=Lactobacillus pentosus ... [more]

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Properties
Property NameValue
Genbank descriptionKN0AAI2CB10FM1 AbsDev1 Citrus clementina cDNA 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DY258597 ID=DY258597; Name=DY258597; organism=Citrus clementina; type=EST; length=1290bp
AATTGGGAGATGGCCATGAAGAGAGTAGCTAGCTCTGCAATTAACGCTTT
TGCTTCGTCGGGATATCTTCGTTCATCGTCGAGGTTTTCTCGACACTATG
CTTCTTCTGGAAGTAAGAAGATTGTTGGGGTGTTCTACAAGGGCAATGAA
TACGCTTCAATGAATCCCAACTTTCTTGGTTGTGTGGAGGGAGGCTGTGG
TCTGCGTGAATGGCTGGAATCGAAAGGTCACCAATATATTGTCACTGATG
ACAAAGAGGGACCAGACTGTGAACTAGAGAAACATATTCCTGATCTCCAC
GTCCTCATATCTACCCCCTTCCACCCTGCCTATGTTACGGCGGAAAGGAT
TAAGAAGGCCAAAAATTTGCAACTGCTTCTCACTGCTGGAGTTGGCTCTG
ATCATATTGATCTAAATGCTGCTGCTGCTGCTGGTTTAACTGTTGCTGAA
GTTACTGGAAGCAATGTGGTTTCAGTTGCTGAGGACGAGCTTATGAGAAT
CCTTATTCTTGTCCGTAATTTCTTACCTGGACACCATCAAGTTATCAGTG
GGGAATGGAATGTTGCCGGTGTTGCTTATAGAGCTCATGATCTTGAAGGA
AAGACAGTGGGAACTGTTGGTTGTGGACGCATTGGCAAGCTGTTGCTCCA
ACGACTTANACCTTTCAATTGTAACCTCCTTTATCATGACCGGGTGAAGA
TGGATCCTCAATTGGAGAAAGAGACTGGAGCAAAATTTGAGGAGGATCTA
GATACTATGCTTCCCAAATGTGACATAGTTGTTGTCAACACCCCTCTAAC
AGAAAAGACGAGAGGGATGTTTGACAAAGATAGGATTGCAAAGATGAAGA
AGGGCGTCTTGATTGCCAACAATGCTCGAGGAGCAATCATGGACACCCAA
GCTGGTTGTTGACCCTTGCTCCTAGGGAAACCATTGGAGGGTTATAGGGG
GGGAGGTTTGGGAATCCCCAAACCCGCCTCCAAAGGACCCTCCCCTGGGG
GTTAACATGGCCAAATTCAGGAAAAGAACCCCCTCTGGTTTTTCGGGGAA
CCCTTTTTGGAGGCCCAACCTACCCTTATGCTGGCGGGGAGATCAAGGGA
ATTTGCTTTGAAAAAAAATTCTTTCCAGGGGGAAAAAAAAATTTTTTCCT
GTTTTTAAAAATTTTACAATAATGGGGGAGGGGGGGGGGGGGGAAGCCCG
GGGGCCCCCCCCCTTCAAATATTCTAAAAATAATATTTTTTTCCCCGGGT
GTTGGTGAAGAGAAAAGAACGAAGGGAAGTGTATCTGTCG
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