DY258597
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of DY258597 vs. ExPASy Swiss-Prot
Match: GHRB_ECOK1 (Glyoxylate/hydroxypyruvate reductase B OS=Escherichia coli O1:K1 / APEC GN=ghrB PE=3 SV=2) HSP 1 Score: 85.8853 bits (211), Expect = 5.755e-16 Identity = 59/192 (30.73%), Postives = 96/192 (50.00%), Query Frame = 1 Query: 334 VTAERIKKAKNLQLLLTAGVGSDHIDLNXXXXXGLTVAEVTGSNVVSVAEDELMRILILVRNFLPGHHQVISGEWNVA-GVAYRAHDLEGKTVGTVGCGRIGKLLLQRLX-PFNCNLLYHDRVKMDPQLEKETGAKFEEDLDTMLPKCDIVVVNTPLTEKTRGMFDKDRIAKMKKGVLIANNARGAIMDTQA 903 V A ++K L+ T VG D+ D++ + + +VA+ + +L R + +V +GEW + G + D+ KT+G VG GRIG L QR FN +LY+ R + + E+ A++ DLDT+L + D V + PLT++T +F ++ AKMK + N RG ++D A Sbjct: 56 VDAALLEKMPKLRATSTISVGYDNFDVDALTARKILLMHTPTVLTETVADTLMALVLSTARRVVEVAERVKAGEWTASIGPDWYGTDVHHKTLGIVGMGRIGMALAQRAHFGFNMPILYNAR-RHHKEAEERFNARYC-DLDTLLQESDFVCLILPLTDETHHLFGAEQFAKMKSSAIFINAGRGPVVDENA 245
BLAST of DY258597 vs. ExPASy Swiss-Prot
Match: GHRB_ECO8A (Glyoxylate/hydroxypyruvate reductase B OS=Escherichia coli O8 (strain IAI1) GN=ghrB PE=3 SV=1) HSP 1 Score: 85.8853 bits (211), Expect = 5.755e-16 Identity = 59/192 (30.73%), Postives = 96/192 (50.00%), Query Frame = 1 Query: 334 VTAERIKKAKNLQLLLTAGVGSDHIDLNXXXXXGLTVAEVTGSNVVSVAEDELMRILILVRNFLPGHHQVISGEWNVA-GVAYRAHDLEGKTVGTVGCGRIGKLLLQRLX-PFNCNLLYHDRVKMDPQLEKETGAKFEEDLDTMLPKCDIVVVNTPLTEKTRGMFDKDRIAKMKKGVLIANNARGAIMDTQA 903 V A ++K L+ T VG D+ D++ + + +VA+ + +L R + +V +GEW + G + D+ KT+G VG GRIG L QR FN +LY+ R + + E+ A++ DLDT+L + D V + PLT++T +F ++ AKMK + N RG ++D A Sbjct: 56 VDAALLEKMPKLRATSTISVGYDNFDVDALTARKILLMHTPTVLTETVADTLMALVLSTARRVVEVAERVKAGEWTASIGPDWYGTDVHHKTLGIVGMGRIGMALAQRAHFGFNMPILYNAR-RHHKEAEERFNARYC-DLDTLLQESDFVCLILPLTDETHHLFGAEQFAKMKSSAIFINAGRGPVVDENA 245
BLAST of DY258597 vs. ExPASy Swiss-Prot
Match: GHRB_ECO81 (Glyoxylate/hydroxypyruvate reductase B OS=Escherichia coli O81 (strain ED1a) GN=ghrB PE=3 SV=1) HSP 1 Score: 85.8853 bits (211), Expect = 5.755e-16 Identity = 59/192 (30.73%), Postives = 96/192 (50.00%), Query Frame = 1 Query: 334 VTAERIKKAKNLQLLLTAGVGSDHIDLNXXXXXGLTVAEVTGSNVVSVAEDELMRILILVRNFLPGHHQVISGEWNVA-GVAYRAHDLEGKTVGTVGCGRIGKLLLQRLX-PFNCNLLYHDRVKMDPQLEKETGAKFEEDLDTMLPKCDIVVVNTPLTEKTRGMFDKDRIAKMKKGVLIANNARGAIMDTQA 903 V A ++K L+ T VG D+ D++ + + +VA+ + +L R + +V +GEW + G + D+ KT+G VG GRIG L QR FN +LY+ R + + E+ A++ DLDT+L + D V + PLT++T +F ++ AKMK + N RG ++D A Sbjct: 56 VDAALLEKMPKLRATSTISVGYDNFDVDALTARKILLMHTPTVLTETVADTLMALVLSTARRVVEVAERVKAGEWTASIGPDWYGTDVHHKTLGIVGMGRIGMALAQRAHFGFNMPILYNAR-RHHKEAEERFNARYC-DLDTLLQESDFVCLILPLTDETHHLFGAEQFAKMKSSAIFINAGRGPVVDENA 245
BLAST of DY258597 vs. ExPASy Swiss-Prot
Match: GHRB_ECO5E (Glyoxylate/hydroxypyruvate reductase B OS=Escherichia coli O157:H7 (strain EC4115 / EHEC) GN=ghrB PE=3 SV=1) HSP 1 Score: 85.8853 bits (211), Expect = 5.755e-16 Identity = 59/192 (30.73%), Postives = 96/192 (50.00%), Query Frame = 1 Query: 334 VTAERIKKAKNLQLLLTAGVGSDHIDLNXXXXXGLTVAEVTGSNVVSVAEDELMRILILVRNFLPGHHQVISGEWNVA-GVAYRAHDLEGKTVGTVGCGRIGKLLLQRLX-PFNCNLLYHDRVKMDPQLEKETGAKFEEDLDTMLPKCDIVVVNTPLTEKTRGMFDKDRIAKMKKGVLIANNARGAIMDTQA 903 V A ++K L+ T VG D+ D++ + + +VA+ + +L R + +V +GEW + G + D+ KT+G VG GRIG L QR FN +LY+ R + + E+ A++ DLDT+L + D V + PLT++T +F ++ AKMK + N RG ++D A Sbjct: 56 VDAALLEKMPKLRATSTISVGYDNFDVDALTARKILLMHTPTVLTETVADTLMALVLSTARRVVEVAERVKAGEWTASIGPDWYGTDVHHKTLGIVGMGRIGMALAQRAHFGFNMPILYNAR-RHHKEAEERFNARYC-DLDTLLQESDFVCLILPLTDETHHLFGAEQFAKMKSSAIFINAGRGPVVDENA 245
BLAST of DY258597 vs. ExPASy Swiss-Prot
Match: GHRB_ECO57 (Glyoxylate/hydroxypyruvate reductase B OS=Escherichia coli O157:H7 GN=tkrA PE=3 SV=1) HSP 1 Score: 85.8853 bits (211), Expect = 5.755e-16 Identity = 59/192 (30.73%), Postives = 96/192 (50.00%), Query Frame = 1 Query: 334 VTAERIKKAKNLQLLLTAGVGSDHIDLNXXXXXGLTVAEVTGSNVVSVAEDELMRILILVRNFLPGHHQVISGEWNVA-GVAYRAHDLEGKTVGTVGCGRIGKLLLQRLX-PFNCNLLYHDRVKMDPQLEKETGAKFEEDLDTMLPKCDIVVVNTPLTEKTRGMFDKDRIAKMKKGVLIANNARGAIMDTQA 903 V A ++K L+ T VG D+ D++ + + +VA+ + +L R + +V +GEW + G + D+ KT+G VG GRIG L QR FN +LY+ R + + E+ A++ DLDT+L + D V + PLT++T +F ++ AKMK + N RG ++D A Sbjct: 56 VDAALLEKMPKLRATSTISVGYDNFDVDALTARKILLMHTPTVLTETVADTLMALVLSTARRVVEVAERVKAGEWTASIGPDWYGTDVHHKTLGIVGMGRIGMALAQRAHFGFNMPILYNAR-RHHKEAEERFNARYC-DLDTLLQESDFVCLILPLTDETHHLFGAEQFAKMKSSAIFINAGRGPVVDENA 245
BLAST of DY258597 vs. ExPASy Swiss-Prot
Match: GHRB_ECO55 (Glyoxylate/hydroxypyruvate reductase B OS=Escherichia coli (strain 55989 / EAEC) GN=ghrB PE=3 SV=1) HSP 1 Score: 85.8853 bits (211), Expect = 5.755e-16 Identity = 59/192 (30.73%), Postives = 96/192 (50.00%), Query Frame = 1 Query: 334 VTAERIKKAKNLQLLLTAGVGSDHIDLNXXXXXGLTVAEVTGSNVVSVAEDELMRILILVRNFLPGHHQVISGEWNVA-GVAYRAHDLEGKTVGTVGCGRIGKLLLQRLX-PFNCNLLYHDRVKMDPQLEKETGAKFEEDLDTMLPKCDIVVVNTPLTEKTRGMFDKDRIAKMKKGVLIANNARGAIMDTQA 903 V A ++K L+ T VG D+ D++ + + +VA+ + +L R + +V +GEW + G + D+ KT+G VG GRIG L QR FN +LY+ R + + E+ A++ DLDT+L + D V + PLT++T +F ++ AKMK + N RG ++D A Sbjct: 56 VDAALLEKMPKLRATSTISVGYDNFDVDALTARKILLMHTPTVLTETVADTLMALVLSTARRVVEVAERVKAGEWTASIGPDWYGTDVHHKTLGIVGMGRIGMALAQRAHFGFNMPILYNAR-RHHKEAEERFNARYC-DLDTLLQESDFVCLILPLTDETHHLFGAEQFAKMKSSAIFINAGRGPVVDENA 245
BLAST of DY258597 vs. ExPASy Swiss-Prot
Match: GHRB_ECO45 (Glyoxylate/hydroxypyruvate reductase B OS=Escherichia coli O45:K1 (strain S88 / ExPEC) GN=ghrB PE=3 SV=1) HSP 1 Score: 85.8853 bits (211), Expect = 5.755e-16 Identity = 59/192 (30.73%), Postives = 96/192 (50.00%), Query Frame = 1 Query: 334 VTAERIKKAKNLQLLLTAGVGSDHIDLNXXXXXGLTVAEVTGSNVVSVAEDELMRILILVRNFLPGHHQVISGEWNVA-GVAYRAHDLEGKTVGTVGCGRIGKLLLQRLX-PFNCNLLYHDRVKMDPQLEKETGAKFEEDLDTMLPKCDIVVVNTPLTEKTRGMFDKDRIAKMKKGVLIANNARGAIMDTQA 903 V A ++K L+ T VG D+ D++ + + +VA+ + +L R + +V +GEW + G + D+ KT+G VG GRIG L QR FN +LY+ R + + E+ A++ DLDT+L + D V + PLT++T +F ++ AKMK + N RG ++D A Sbjct: 56 VDAALLEKMPKLRATSTISVGYDNFDVDALTARKILLMHTPTVLTETVADTLMALVLSTARRVVEVAERVKAGEWTASIGPDWYGTDVHHKTLGIVGMGRIGMALAQRAHFGFNMPILYNAR-RHHKEAEERFNARYC-DLDTLLQESDFVCLILPLTDETHHLFGAEQFAKMKSSAIFINAGRGPVVDENA 245
BLAST of DY258597 vs. ExPASy Swiss-Prot
Match: GHRB_ECO27 (Glyoxylate/hydroxypyruvate reductase B OS=Escherichia coli O127:H6 (strain E2348/69 / EPEC) GN=ghrB PE=3 SV=1) HSP 1 Score: 85.8853 bits (211), Expect = 5.755e-16 Identity = 59/192 (30.73%), Postives = 96/192 (50.00%), Query Frame = 1 Query: 334 VTAERIKKAKNLQLLLTAGVGSDHIDLNXXXXXGLTVAEVTGSNVVSVAEDELMRILILVRNFLPGHHQVISGEWNVA-GVAYRAHDLEGKTVGTVGCGRIGKLLLQRLX-PFNCNLLYHDRVKMDPQLEKETGAKFEEDLDTMLPKCDIVVVNTPLTEKTRGMFDKDRIAKMKKGVLIANNARGAIMDTQA 903 V A ++K L+ T VG D+ D++ + + +VA+ + +L R + +V +GEW + G + D+ KT+G VG GRIG L QR FN +LY+ R + + E+ A++ DLDT+L + D V + PLT++T +F ++ AKMK + N RG ++D A Sbjct: 56 VDAALLEKMPKLRATSTISVGYDNFDVDALTARKILLMHTPTVLTETVADTLMALVLSTARRVVEVAERVKAGEWTASIGPDWYGTDVHHKTLGIVGMGRIGMALAQRAHFGFNMPILYNAR-RHHKEAEERFNARYC-DLDTLLQESDFVCLILPLTDETHHLFGAEQFAKMKSSAIFINAGRGPVVDENA 245
BLAST of DY258597 vs. ExPASy Swiss-Prot
Match: GHRB_ECO24 (Glyoxylate/hydroxypyruvate reductase B OS=Escherichia coli O139:H28 (strain E24377A / ETEC) GN=ghrB PE=3 SV=1) HSP 1 Score: 85.8853 bits (211), Expect = 5.755e-16 Identity = 59/192 (30.73%), Postives = 96/192 (50.00%), Query Frame = 1 Query: 334 VTAERIKKAKNLQLLLTAGVGSDHIDLNXXXXXGLTVAEVTGSNVVSVAEDELMRILILVRNFLPGHHQVISGEWNVA-GVAYRAHDLEGKTVGTVGCGRIGKLLLQRLX-PFNCNLLYHDRVKMDPQLEKETGAKFEEDLDTMLPKCDIVVVNTPLTEKTRGMFDKDRIAKMKKGVLIANNARGAIMDTQA 903 V A ++K L+ T VG D+ D++ + + +VA+ + +L R + +V +GEW + G + D+ KT+G VG GRIG L QR FN +LY+ R + + E+ A++ DLDT+L + D V + PLT++T +F ++ AKMK + N RG ++D A Sbjct: 56 VDAALLEKMPKLRATSTISVGYDNFDVDALTARKILLMHTPTVLTETVADTLMALVLSTARRVVEVAERVKAGEWTASIGPDWYGTDVHHKTLGIVGMGRIGMALAQRAHFGFNMPILYNAR-RHHKEAEERFNARYC-DLDTLLQESDFVCLILPLTDETHHLFGAEQFAKMKSSAIFINAGRGPVVDENA 245
BLAST of DY258597 vs. ExPASy Swiss-Prot
Match: GHRB_SHISS (Glyoxylate/hydroxypyruvate reductase B OS=Shigella sonnei (strain Ss046) GN=ghrB PE=3 SV=2) HSP 1 Score: 85.5001 bits (210), Expect = 7.516e-16 Identity = 59/192 (30.73%), Postives = 95/192 (49.48%), Query Frame = 1 Query: 334 VTAERIKKAKNLQLLLTAGVGSDHIDLNXXXXXGLTVAEVTGSNVVSVAEDELMRILILVRNFLPGHHQVISGEWNVA-GVAYRAHDLEGKTVGTVGCGRIGKLLLQRLX-PFNCNLLYHDRVKMDPQLEKETGAKFEEDLDTMLPKCDIVVVNTPLTEKTRGMFDKDRIAKMKKGVLIANNARGAIMDTQA 903 V A ++K L T VG D+ D++ + + +VA+ + +L R + +V +GEW + G + D+ KT+G VG GRIG L QR FN +LY+ R + + E+ A++ DLDT+L + D V + PLT++T +F ++ AKMK + N RG ++D A Sbjct: 56 VDAALLEKMPKLHATSTISVGYDNFDVDALTARKILLMHTPTVLTETVADTLMALVLSTARRVVEVAERVKAGEWTASIGPDWYGTDVHHKTLGIVGMGRIGMALAQRAHFGFNMPILYNAR-RHHKEAEERFNARYC-DLDTLLQESDFVCLILPLTDETHHLFGAEQFAKMKSSAIFINAGRGPVVDENA 245 The following BLAST results are available for this feature:
BLAST of DY258597 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 177
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Sequences
The
following sequences are available for this feature:
EST sequence >DY258597 ID=DY258597; Name=DY258597; organism=Citrus clementina; type=EST; length=1290bpback to top |