DY258598

Overview
NameDY258598
Unique NameDY258598
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length783
Libraries
Library NameType
AbsDev1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
[Close]
BLAST of DY258598 vs. ExPASy Swiss-Prot
Match: HS90B_RAT (Heat shock protein HSP 90-beta OS=Rattus norvegicus GN=Hsp90ab1 PE=1 SV=4)

HSP 1 Score: 132.109 bits (331), Expect = 3.346e-30
Identity = 62/85 (72.94%), Postives = 73/85 (85.88%), Query Frame = 2 
Query:    2 AYLVAEKVIVTAKHNDDEQYIWESQAGGSFTVTRDTSGEPLGRGTKITLHLKEDQLEYLEERRLKDLINKHSEFI*YPISLWIEK 256
            AYLVAEKV+V  KHNDDEQY WES AGGSFTV  D  GEP+GRGTK+ LHLKEDQ EYLEERR+K+++ KHS+FI YPI+L++EK
Sbjct:  136 AYLVAEKVVVITKHNDDEQYAWESSAGGSFTVRAD-HGEPIGRGTKVILHLKEDQTEYLEERRVKEVVKKHSQFIGYPITLYLEK 219
[Close]
BLAST of DY258598 vs. ExPASy Swiss-Prot
Match: HS90B_PONAB (Heat shock protein HSP 90-beta OS=Pongo abelii GN=HSP90AB1 PE=2 SV=1)

HSP 1 Score: 132.109 bits (331), Expect = 3.346e-30
Identity = 62/85 (72.94%), Postives = 73/85 (85.88%), Query Frame = 2 
Query:    2 AYLVAEKVIVTAKHNDDEQYIWESQAGGSFTVTRDTSGEPLGRGTKITLHLKEDQLEYLEERRLKDLINKHSEFI*YPISLWIEK 256
            AYLVAEKV+V  KHNDDEQY WES AGGSFTV  D  GEP+GRGTK+ LHLKEDQ EYLEERR+K+++ KHS+FI YPI+L++EK
Sbjct:  136 AYLVAEKVVVITKHNDDEQYAWESSAGGSFTVRAD-HGEPIGRGTKVILHLKEDQTEYLEERRVKEVVKKHSQFIGYPITLYLEK 219
[Close]
BLAST of DY258598 vs. ExPASy Swiss-Prot
Match: HS90B_MOUSE (Heat shock protein HSP 90-beta OS=Mus musculus GN=Hsp90ab1 PE=1 SV=2)

HSP 1 Score: 132.109 bits (331), Expect = 3.346e-30
Identity = 62/85 (72.94%), Postives = 73/85 (85.88%), Query Frame = 2 
Query:    2 AYLVAEKVIVTAKHNDDEQYIWESQAGGSFTVTRDTSGEPLGRGTKITLHLKEDQLEYLEERRLKDLINKHSEFI*YPISLWIEK 256
            AYLVAEKV+V  KHNDDEQY WES AGGSFTV  D  GEP+GRGTK+ LHLKEDQ EYLEERR+K+++ KHS+FI YPI+L++EK
Sbjct:  136 AYLVAEKVVVITKHNDDEQYAWESSAGGSFTVRAD-HGEPIGRGTKVILHLKEDQTEYLEERRVKEVVKKHSQFIGYPITLYLEK 219
[Close]
BLAST of DY258598 vs. ExPASy Swiss-Prot
Match: HS90B_MACFA (Heat shock protein HSP 90-beta OS=Macaca fascicularis GN=Hsp90ab1 PE=2 SV=1)

HSP 1 Score: 132.109 bits (331), Expect = 3.346e-30
Identity = 62/85 (72.94%), Postives = 73/85 (85.88%), Query Frame = 2 
Query:    2 AYLVAEKVIVTAKHNDDEQYIWESQAGGSFTVTRDTSGEPLGRGTKITLHLKEDQLEYLEERRLKDLINKHSEFI*YPISLWIEK 256
            AYLVAEKV+V  KHNDDEQY WES AGGSFTV  D  GEP+GRGTK+ LHLKEDQ EYLEERR+K+++ KHS+FI YPI+L++EK
Sbjct:  136 AYLVAEKVVVITKHNDDEQYAWESSAGGSFTVRAD-HGEPIGRGTKVILHLKEDQTEYLEERRVKEVVKKHSQFIGYPITLYLEK 219
[Close]
BLAST of DY258598 vs. ExPASy Swiss-Prot
Match: HS90B_HUMAN (Heat shock protein HSP 90-beta OS=Homo sapiens GN=HSP90AB1 PE=1 SV=4)

HSP 1 Score: 132.109 bits (331), Expect = 3.346e-30
Identity = 62/85 (72.94%), Postives = 73/85 (85.88%), Query Frame = 2 
Query:    2 AYLVAEKVIVTAKHNDDEQYIWESQAGGSFTVTRDTSGEPLGRGTKITLHLKEDQLEYLEERRLKDLINKHSEFI*YPISLWIEK 256
            AYLVAEKV+V  KHNDDEQY WES AGGSFTV  D  GEP+GRGTK+ LHLKEDQ EYLEERR+K+++ KHS+FI YPI+L++EK
Sbjct:  136 AYLVAEKVVVITKHNDDEQYAWESSAGGSFTVRAD-HGEPIGRGTKVILHLKEDQTEYLEERRVKEVVKKHSQFIGYPITLYLEK 219
[Close]
BLAST of DY258598 vs. ExPASy Swiss-Prot
Match: HS90B_HORSE (Heat shock protein HSP 90-beta OS=Equus caballus GN=HSP90AB1 PE=2 SV=3)

HSP 1 Score: 132.109 bits (331), Expect = 3.346e-30
Identity = 62/85 (72.94%), Postives = 73/85 (85.88%), Query Frame = 2 
Query:    2 AYLVAEKVIVTAKHNDDEQYIWESQAGGSFTVTRDTSGEPLGRGTKITLHLKEDQLEYLEERRLKDLINKHSEFI*YPISLWIEK 256
            AYLVAEKV+V  KHNDDEQY WES AGGSFTV  D  GEP+GRGTK+ LHLKEDQ EYLEERR+K+++ KHS+FI YPI+L++EK
Sbjct:  136 AYLVAEKVVVITKHNDDEQYAWESSAGGSFTVRAD-HGEPIGRGTKVILHLKEDQTEYLEERRVKEVVKKHSQFIGYPITLYLEK 219
[Close]
BLAST of DY258598 vs. ExPASy Swiss-Prot
Match: HS90B_BOVIN (Heat shock protein HSP 90-beta OS=Bos taurus GN=HSP90AB1 PE=2 SV=3)

HSP 1 Score: 132.109 bits (331), Expect = 3.346e-30
Identity = 62/85 (72.94%), Postives = 73/85 (85.88%), Query Frame = 2 
Query:    2 AYLVAEKVIVTAKHNDDEQYIWESQAGGSFTVTRDTSGEPLGRGTKITLHLKEDQLEYLEERRLKDLINKHSEFI*YPISLWIEK 256
            AYLVAEKV+V  KHNDDEQY WES AGGSFTV  D  GEP+GRGTK+ LHLKEDQ EYLEERR+K+++ KHS+FI YPI+L++EK
Sbjct:  136 AYLVAEKVVVITKHNDDEQYAWESSAGGSFTVRAD-HGEPIGRGTKVILHLKEDQTEYLEERRVKEVVKKHSQFIGYPITLYLEK 219
[Close]
BLAST of DY258598 vs. ExPASy Swiss-Prot
Match: HS90A_CHICK (Heat shock protein HSP 90-alpha OS=Gallus gallus GN=HSP90AA1 PE=3 SV=3)

HSP 1 Score: 131.724 bits (330), Expect = 4.370e-30
Identity = 63/85 (74.12%), Postives = 72/85 (84.71%), Query Frame = 2 
Query:    2 AYLVAEKVIVTAKHNDDEQYIWESQAGGSFTVTRDTSGEPLGRGTKITLHLKEDQLEYLEERRLKDLINKHSEFI*YPISLWIEK 256
            AYLVAEKV V  KHNDDEQY WES AGGSFTV  D +GEPLGRGTK+ LHLKEDQ EYLEERR+K+++ KHS+FI YPI L++EK
Sbjct:  140 AYLVAEKVTVITKHNDDEQYAWESSAGGSFTVRLD-NGEPLGRGTKVILHLKEDQTEYLEERRIKEIVKKHSQFIGYPIRLFVEK 223
[Close]
BLAST of DY258598 vs. ExPASy Swiss-Prot
Match: HS90A_PANTR (Heat shock protein HSP 90-alpha OS=Pan troglodytes GN=HSP90AA1 PE=2 SV=1)

HSP 1 Score: 130.954 bits (328), Expect = 7.454e-30
Identity = 62/85 (72.94%), Postives = 72/85 (84.71%), Query Frame = 2 
Query:    2 AYLVAEKVIVTAKHNDDEQYIWESQAGGSFTVTRDTSGEPLGRGTKITLHLKEDQLEYLEERRLKDLINKHSEFI*YPISLWIEK 256
            AYLVAEKV V  KHNDDEQY WES AGGSFTV  DT GEP+GRGTK+  HLKEDQ EYLEERR+K+++ KHS+FI YPI+L++EK
Sbjct:  141 AYLVAEKVTVITKHNDDEQYAWESSAGGSFTVRTDT-GEPMGRGTKVIPHLKEDQTEYLEERRIKEIVKKHSQFIGYPITLFVEK 224
[Close]
BLAST of DY258598 vs. ExPASy Swiss-Prot
Match: HS90B_CHICK (Heat shock cognate protein HSP 90-beta OS=Gallus gallus GN=HSP90AB1 PE=2 SV=1)

HSP 1 Score: 130.183 bits (326), Expect = 1.271e-29
Identity = 61/85 (71.76%), Postives = 73/85 (85.88%), Query Frame = 2 
Query:    2 AYLVAEKVIVTAKHNDDEQYIWESQAGGSFTVTRDTSGEPLGRGTKITLHLKEDQLEYLEERRLKDLINKHSEFI*YPISLWIEK 256
            AYLVAEKV+V  KHNDDEQY WES AGGSFTV  D  GEP+GRGTK+ L+LKEDQ EYLEERR+K+++ KHS+FI YPI+L++EK
Sbjct:  136 AYLVAEKVVVITKHNDDEQYAWESSAGGSFTVRTD-HGEPIGRGTKVILYLKEDQTEYLEERRVKEVVKKHSQFIGYPITLYVEK 219
The following BLAST results are available for this feature:
BLAST of DY258598 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 90
Match NameE-valueIdentityDescription
HS90B_RAT3.346e-3072.94Heat shock protein HSP 90-beta OS=Rattus norvegicu... [more]
HS90B_PONAB3.346e-3072.94Heat shock protein HSP 90-beta OS=Pongo abelii GN=... [more]
HS90B_MOUSE3.346e-3072.94Heat shock protein HSP 90-beta OS=Mus musculus GN=... [more]
HS90B_MACFA3.346e-3072.94Heat shock protein HSP 90-beta OS=Macaca fascicula... [more]
HS90B_HUMAN3.346e-3072.94Heat shock protein HSP 90-beta OS=Homo sapiens GN=... [more]
HS90B_HORSE3.346e-3072.94Heat shock protein HSP 90-beta OS=Equus caballus G... [more]
HS90B_BOVIN3.346e-3072.94Heat shock protein HSP 90-beta OS=Bos taurus GN=HS... [more]
HS90A_CHICK4.370e-3074.12Heat shock protein HSP 90-alpha OS=Gallus gallus G... [more]
HS90A_PANTR7.454e-3072.94Heat shock protein HSP 90-alpha OS=Pan troglodytes... [more]
HS90B_CHICK1.271e-2971.76Heat shock cognate protein HSP 90-beta OS=Gallus g... [more]

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Properties
Property NameValue
Genbank descriptionKN0AAI2CB11FM1 AbsDev1 Citrus clementina cDNA 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DY258598 ID=DY258598; Name=DY258598; organism=Citrus clementina; type=EST; length=783bp
AGCTTACTTGGTTGCTGAGAAGGTTATTGTTACCGCCAAGCACAACGATG
ATGAGCAGTACATCTGGGAGTCTCAGGCTGGTGGATCATTCACTGTTACC
AGGGACACTTCTGGTGAGCCTCTTGGCCGCGGTACAAAGATCACTCTCCA
CCTCAAGGAAGACCAACTTGAGTACCTTGAGGAGCGCCGTTTGAAAGATT
TGATTAACAAACACTCTGAGTTCATTTAGTACCCAATTTCCCTCTGGATT
GAGAAAACCCCTGAGAAGGAAATTTCTGATGATGAGGACAAGGAAGAAAA
AAAGGAATGAGAGGGGAAAGCTGAGGATGTTGAAGAAGAAGAAAAAAAAG
AAAAACAAAAAAAAAAAAAAATCAGGAAGGGGTCCCAGGAGGGTCCTTTG
TGGAAACACCAAAAACCCCTTTGGAAGAAGAAACCCCAAGGAAATAAAAA
AAAAAAATTAGCCTGCCCCCCCCAAAAATCCGAAAAAGGACGGGAGAGAA
ACTTGTGCTGGGAACCCTTCTCCATGGAAGGGCCCCCTTGGAGTTTAAGG
TATTCCCCTTTTGTCCCCAAGAAGGCACCCTTTTTTATCCCTTTGAAAAA
AAGGAAAAAAAACCCAAAAAACTTCCACTCCCCCCCCCCCCCCCCGGGGC
CCTCCTCCAGGAAAAAAAAAGGGGGAAAAAAGATTAAAACCCCCCCAAAA
AACACTCGTGTTTTTTTGTTTTAGAAGGGGGGGTGGTTTGTGTGAATTTT
CCCCCCCAAAAGAAACATCCCCCCCCCCCCCCC
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