DY258598

Overview
NameDY258598
Unique NameDY258598
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length783
Libraries
Library NameType
AbsDev1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of DY258598 vs. ExPASy Swiss-Prot
Match: HS90B_DANRE (Heat shock protein HSP 90-beta OS=Danio rerio GN=hsp90ab1 PE=2 SV=2)

HSP 1 Score: 128.257 bits (321), Expect = 4.831e-29
Identity = 60/85 (70.59%), Postives = 72/85 (84.71%), Query Frame = 2
Query:    2 AYLVAEKVIVTAKHNDDEQYIWESQAGGSFTVTRDTSGEPLGRGTKITLHLKEDQLEYLEERRLKDLINKHSEFI*YPISLWIEK 256
            AYLVAEKV V  KHNDDEQY WES AGGSFTV  D  GEP+GRGTK+ LHLKEDQ EY+EE+R+K+++ KHS+FI YPI+L++EK
Sbjct:  135 AYLVAEKVTVITKHNDDEQYAWESSAGGSFTVKVD-HGEPIGRGTKVILHLKEDQTEYIEEKRVKEVVKKHSQFIGYPITLYVEK 218          
BLAST of DY258598 vs. ExPASy Swiss-Prot
Match: H90A1_DANRE (Heat shock protein HSP 90-alpha 1 OS=Danio rerio GN=hsp90a.1 PE=2 SV=3)

HSP 1 Score: 126.716 bits (317), Expect = 1.406e-28
Identity = 61/85 (71.76%), Postives = 72/85 (84.71%), Query Frame = 2
Query:    2 AYLVAEKVIVTAKHNDDEQYIWESQAGGSFTVTRDTSGEPLGRGTKITLHLKEDQLEYLEERRLKDLINKHSEFI*YPISLWIEK 256
            AYLVAEKV V  KHNDDEQYIWES AGGSFTV  D  GE +GRGTK+ LHLKEDQ EY+EE+R+K+++ KHS+FI YPI+L+IEK
Sbjct:  138 AYLVAEKVTVITKHNDDEQYIWESAAGGSFTVKPDF-GESIGRGTKVILHLKEDQSEYVEEKRIKEVVKKHSQFIGYPITLYIEK 221          
BLAST of DY258598 vs. ExPASy Swiss-Prot
Match: HSP83_DROAV (Heat shock protein 83 OS=Drosophila auraria GN=Hsp83 PE=3 SV=1)

HSP 1 Score: 126.331 bits (316), Expect = 1.836e-28
Identity = 60/85 (70.59%), Postives = 73/85 (85.88%), Query Frame = 2
Query:    2 AYLVAEKVIVTAKHNDDEQYIWESQAGGSFTVTRDTSGEPLGRGTKITLHLKEDQLEYLEERRLKDLINKHSEFI*YPISLWIEK 256
            AYLVA+KV VT+K+NDDEQYIWES AGGSFTV  D S EPLGRGTKI L++KEDQ +YLEE ++K+++NKHS+FI YPI L +EK
Sbjct:  129 AYLVADKVTVTSKNNDDEQYIWESSAGGSFTVRADNS-EPLGRGTKIVLYIKEDQTDYLEESKIKEIVNKHSQFIGYPIKLLVEK 212          
BLAST of DY258598 vs. ExPASy Swiss-Prot
Match: HS902_HUMAN (Putative heat shock protein HSP 90-alpha A2 OS=Homo sapiens GN=HSP90AA2 PE=1 SV=2)

HSP 1 Score: 126.331 bits (316), Expect = 1.836e-28
Identity = 60/85 (70.59%), Postives = 71/85 (83.53%), Query Frame = 2
Query:    2 AYLVAEKVIVTAKHNDDEQYIWESQAGGSFTVTRDTSGEPLGRGTKITLHLKEDQLEYLEERRLKDLINKHSEFI*YPISLWIEK 256
            AYLVAEKV V  KHNDDEQY WES AGGSFTV  DT GE +GRGTK+ LHLKEDQ EYLEE+R+K+++ KHS+ I YPI+L++EK
Sbjct:  141 AYLVAEKVTVITKHNDDEQYAWESSAGGSFTVRTDT-GERMGRGTKVILHLKEDQTEYLEEQRIKEIVKKHSQLIGYPITLFVEK 224          
BLAST of DY258598 vs. ExPASy Swiss-Prot
Match: HSP83_DROSI (Heat shock protein 83 (Fragment) OS=Drosophila simulans GN=Hsp83 PE=3 SV=1)

HSP 1 Score: 125.946 bits (315), Expect = 2.398e-28
Identity = 59/85 (69.41%), Postives = 73/85 (85.88%), Query Frame = 2
Query:    2 AYLVAEKVIVTAKHNDDEQYIWESQAGGSFTVTRDTSGEPLGRGTKITLHLKEDQLEYLEERRLKDLINKHSEFI*YPISLWIEK 256
            AYLVA+KV VT+K+NDDEQY+WES AGGSFTV  D S EPLGRGTKI L++KEDQ +YLEE ++K+++NKHS+FI YPI L +EK
Sbjct:  129 AYLVADKVTVTSKNNDDEQYVWESSAGGSFTVRADNS-EPLGRGTKIVLYIKEDQTDYLEESKIKEIVNKHSQFIGYPIKLLVEK 212          
BLAST of DY258598 vs. ExPASy Swiss-Prot
Match: HSP83_DROME (Heat shock protein 83 OS=Drosophila melanogaster GN=Hsp83 PE=1 SV=1)

HSP 1 Score: 125.946 bits (315), Expect = 2.398e-28
Identity = 59/85 (69.41%), Postives = 73/85 (85.88%), Query Frame = 2
Query:    2 AYLVAEKVIVTAKHNDDEQYIWESQAGGSFTVTRDTSGEPLGRGTKITLHLKEDQLEYLEERRLKDLINKHSEFI*YPISLWIEK 256
            AYLVA+KV VT+K+NDDEQY+WES AGGSFTV  D S EPLGRGTKI L++KEDQ +YLEE ++K+++NKHS+FI YPI L +EK
Sbjct:  129 AYLVADKVTVTSKNNDDEQYVWESSAGGSFTVRADNS-EPLGRGTKIVLYIKEDQTDYLEESKIKEIVNKHSQFIGYPIKLLVEK 212          
BLAST of DY258598 vs. ExPASy Swiss-Prot
Match: HSP90_THEAN (Heat shock protein 90 OS=Theileria annulata GN=TA12105 PE=3 SV=1)

HSP 1 Score: 125.561 bits (314), Expect = 3.132e-28
Identity = 60/86 (69.77%), Postives = 71/86 (82.56%), Query Frame = 2
Query:    2 AYLVAEKVIVTAKHNDDEQYIWESQAGGSFTVTRDTSGEPLGRGTKITLHLKEDQLEYLEERRLKDLINKHSEFI*YPISLWIEKT 259
            AYLVA+KV V +K+N D+QY+WES A G FTV RD S EPL RGT++ LHLKEDQ EYLEERRLK+L+ KHSEFI +PISL +EKT
Sbjct:  134 AYLVADKVTVVSKNNADDQYVWESSASGHFTVKRDDSHEPLKRGTRLILHLKEDQTEYLEERRLKELVKKHSEFISFPISLSVEKT 219          
BLAST of DY258598 vs. ExPASy Swiss-Prot
Match: HSP83_DROVI (Heat shock protein 83 (Fragment) OS=Drosophila virilis GN=Hsp83 PE=3 SV=1)

HSP 1 Score: 124.79 bits (312), Expect = 5.342e-28
Identity = 59/85 (69.41%), Postives = 72/85 (84.71%), Query Frame = 2
Query:    2 AYLVAEKVIVTAKHNDDEQYIWESQAGGSFTVTRDTSGEPLGRGTKITLHLKEDQLEYLEERRLKDLINKHSEFI*YPISLWIEK 256
            AYLVA+KV VT+K+NDDEQY+WES AGGSFTV  D S EPLGRGTKI L +KEDQ +YLEE ++K+++NKHS+FI YPI L +EK
Sbjct:  129 AYLVADKVTVTSKNNDDEQYVWESSAGGSFTVRADNS-EPLGRGTKIVLFIKEDQTDYLEESKIKEIVNKHSQFIGYPIKLLVEK 212          
BLAST of DY258598 vs. ExPASy Swiss-Prot
Match: HSP83_DROPS (Heat shock protein 83 OS=Drosophila pseudoobscura pseudoobscura GN=Hsp83 PE=3 SV=2)

HSP 1 Score: 124.405 bits (311), Expect = 6.976e-28
Identity = 57/85 (67.06%), Postives = 73/85 (85.88%), Query Frame = 2
Query:    2 AYLVAEKVIVTAKHNDDEQYIWESQAGGSFTVTRDTSGEPLGRGTKITLHLKEDQLEYLEERRLKDLINKHSEFI*YPISLWIEK 256
            AYL+A++V VT+K+NDDEQY+WES AGGSFTV  D S EPLGRGTKI L++KEDQ +YLEE ++K+++NKHS+FI YPI L +EK
Sbjct:  129 AYLIADRVTVTSKNNDDEQYVWESSAGGSFTVKADNS-EPLGRGTKIVLYIKEDQTDYLEESKIKEIVNKHSQFIGYPIKLLVEK 212          
BLAST of DY258598 vs. ExPASy Swiss-Prot
Match: HSP90_THEPA (Heat shock protein 90 OS=Theileria parva GN=TP02_0244 PE=2 SV=2)

HSP 1 Score: 124.02 bits (310), Expect = 9.111e-28
Identity = 59/86 (68.60%), Postives = 71/86 (82.56%), Query Frame = 2
Query:    2 AYLVAEKVIVTAKHNDDEQYIWESQAGGSFTVTRDTSGEPLGRGTKITLHLKEDQLEYLEERRLKDLINKHSEFI*YPISLWIEKT 259
            AYLVA+KV V +K+N D+QY+WES A G FTV +D S EPL RGT++ LHLKEDQ EYLEERRLK+L+ KHSEFI +PISL +EKT
Sbjct:  134 AYLVADKVTVVSKNNADDQYVWESTASGHFTVKKDDSHEPLKRGTRLILHLKEDQTEYLEERRLKELVKKHSEFISFPISLSVEKT 219          
The following BLAST results are available for this feature:
BLAST of DY258598 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 90
Match NameE-valueIdentityDescription
HS90B_DANRE4.831e-2970.59Heat shock protein HSP 90-beta OS=Danio rerio GN=h... [more]
H90A1_DANRE1.406e-2871.76Heat shock protein HSP 90-alpha 1 OS=Danio rerio G... [more]
HSP83_DROAV1.836e-2870.59Heat shock protein 83 OS=Drosophila auraria GN=Hsp... [more]
HS902_HUMAN1.836e-2870.59Putative heat shock protein HSP 90-alpha A2 OS=Hom... [more]
HSP83_DROSI2.398e-2869.41Heat shock protein 83 (Fragment) OS=Drosophila sim... [more]
HSP83_DROME2.398e-2869.41Heat shock protein 83 OS=Drosophila melanogaster G... [more]
HSP90_THEAN3.132e-2869.77Heat shock protein 90 OS=Theileria annulata GN=TA1... [more]
HSP83_DROVI5.342e-2869.41Heat shock protein 83 (Fragment) OS=Drosophila vir... [more]
HSP83_DROPS6.976e-2867.06Heat shock protein 83 OS=Drosophila pseudoobscura ... [more]
HSP90_THEPA9.111e-2868.60Heat shock protein 90 OS=Theileria parva GN=TP02_0... [more]

Pages

back to top
Properties
Property NameValue
Genbank descriptionKN0AAI2CB11FM1 AbsDev1 Citrus clementina cDNA 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DY258598 ID=DY258598; Name=DY258598; organism=Citrus clementina; type=EST; length=783bp
AGCTTACTTGGTTGCTGAGAAGGTTATTGTTACCGCCAAGCACAACGATG
ATGAGCAGTACATCTGGGAGTCTCAGGCTGGTGGATCATTCACTGTTACC
AGGGACACTTCTGGTGAGCCTCTTGGCCGCGGTACAAAGATCACTCTCCA
CCTCAAGGAAGACCAACTTGAGTACCTTGAGGAGCGCCGTTTGAAAGATT
TGATTAACAAACACTCTGAGTTCATTTAGTACCCAATTTCCCTCTGGATT
GAGAAAACCCCTGAGAAGGAAATTTCTGATGATGAGGACAAGGAAGAAAA
AAAGGAATGAGAGGGGAAAGCTGAGGATGTTGAAGAAGAAGAAAAAAAAG
AAAAACAAAAAAAAAAAAAAATCAGGAAGGGGTCCCAGGAGGGTCCTTTG
TGGAAACACCAAAAACCCCTTTGGAAGAAGAAACCCCAAGGAAATAAAAA
AAAAAAATTAGCCTGCCCCCCCCAAAAATCCGAAAAAGGACGGGAGAGAA
ACTTGTGCTGGGAACCCTTCTCCATGGAAGGGCCCCCTTGGAGTTTAAGG
TATTCCCCTTTTGTCCCCAAGAAGGCACCCTTTTTTATCCCTTTGAAAAA
AAGGAAAAAAAACCCAAAAAACTTCCACTCCCCCCCCCCCCCCCCGGGGC
CCTCCTCCAGGAAAAAAAAAGGGGGAAAAAAGATTAAAACCCCCCCAAAA
AACACTCGTGTTTTTTTGTTTTAGAAGGGGGGGTGGTTTGTGTGAATTTT
CCCCCCCAAAAGAAACATCCCCCCCCCCCCCCC
back to top