DY258598

Overview
NameDY258598
Unique NameDY258598
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length783
Libraries
Library NameType
AbsDev1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of DY258598 vs. ExPASy Swiss-Prot
Match: HSP83_DROMI (Heat shock protein 83 (Fragment) OS=Drosophila miranda GN=Hsp83 PE=3 SV=1)

HSP 1 Score: 124.02 bits (310), Expect = 9.111e-28
Identity = 57/85 (67.06%), Postives = 73/85 (85.88%), Query Frame = 2
Query:    2 AYLVAEKVIVTAKHNDDEQYIWESQAGGSFTVTRDTSGEPLGRGTKITLHLKEDQLEYLEERRLKDLINKHSEFI*YPISLWIEK 256
            AYL+A++V VT+K+NDDEQY+WES AGGSFTV  D S EPLGRGTKI L++KEDQ +YLEE ++K+++NKHS+FI YPI L +EK
Sbjct:  129 AYLIADRVTVTSKNNDDEQYVWESSAGGSFTVKADNS-EPLGRGTKIXLYIKEDQTDYLEESKIKEIVNKHSQFIGYPIKLLVEK 212          
BLAST of DY258598 vs. ExPASy Swiss-Prot
Match: H90B3_HUMAN (Putative heat shock protein HSP 90-beta-3 OS=Homo sapiens GN=HSP90AB3P PE=5 SV=1)

HSP 1 Score: 124.02 bits (310), Expect = 9.111e-28
Identity = 58/83 (69.88%), Postives = 70/83 (84.34%), Query Frame = 2
Query:    8 LVAEKVIVTAKHNDDEQYIWESQAGGSFTVTRDTSGEPLGRGTKITLHLKEDQLEYLEERRLKDLINKHSEFI*YPISLWIEK 256
            L AEK++V  KHNDDEQY WES AGGSFTV  D  GEP+GRGTK+ LHLKEDQ EYLEERR+K+++ KHS+FI YPI+L++EK
Sbjct:  117 LQAEKLVVITKHNDDEQYAWESSAGGSFTVHAD-HGEPIGRGTKVILHLKEDQTEYLEERRVKEVVKKHSQFIGYPITLYLEK 198          
BLAST of DY258598 vs. ExPASy Swiss-Prot
Match: HSP90_ASPFU (Heat shock protein 90 OS=Aspergillus fumigatus GN=hsp90 PE=1 SV=3)

HSP 1 Score: 121.709 bits (304), Expect = 4.522e-27
Identity = 56/85 (65.88%), Postives = 71/85 (83.53%), Query Frame = 2
Query:    2 AYLVAEKVIVTAKHNDDEQYIWESQAGGSFTVTRDTSGEPLGRGTKITLHLKEDQLEYLEERRLKDLINKHSEFI*YPISLWIEK 256
            AYLVA++V V +K+NDDEQYIWES AGG+FT+T+DT GE LGRGTKI LHLK++Q +YL E R+K+++ KHSEFI YPI L + K
Sbjct:  127 AYLVADRVTVVSKNNDDEQYIWESAAGGTFTLTQDTEGEQLGRGTKIILHLKDEQTDYLNESRIKEVVRKHSEFISYPIYLHVLK 211          
BLAST of DY258598 vs. ExPASy Swiss-Prot
Match: HSP90_SCHPO (Heat shock protein 90 homolog OS=Schizosaccharomyces pombe GN=swo1 PE=1 SV=2)

HSP 1 Score: 120.168 bits (300), Expect = 1.316e-26
Identity = 58/85 (68.24%), Postives = 68/85 (80.00%), Query Frame = 2
Query:    2 AYLVAEKVIVTAKHNDDEQYIWESQAGGSFTVTRDTSGEPLGRGTKITLHLKEDQLEYLEERRLKDLINKHSEFI*YPISLWIEK 256
            AYLVA+KV V +KHNDDEQYIWES AGGSFTVT DT G  L RGT+I L +KEDQL+YLEE+ +KD + KHSEFI YPI L + +
Sbjct:  128 AYLVADKVQVVSKHNDDEQYIWESSAGGSFTVTLDTDGPRLLRGTEIRLFMKEDQLQYLEEKTIKDTVKKHSEFISYPIQLVVTR 212          
BLAST of DY258598 vs. ExPASy Swiss-Prot
Match: HSP83_DROPB (Heat shock protein 83 (Fragment) OS=Drosophila pseudoobscura bogotana GN=Hsp83 PE=3 SV=1)

HSP 1 Score: 119.013 bits (297), Expect = 2.931e-26
Identity = 55/85 (64.71%), Postives = 70/85 (82.35%), Query Frame = 2
Query:    2 AYLVAEKVIVTAKHNDDEQYIWESQAGGSFTVTRDTSGEPLGRGTKITLHLKEDQLEYLEERRLKDLINKHSEFI*YPISLWIEK 256
            AYL+A++V VT+K+NDDEQY+WES AGGSFTV  D S EPLGRGTKI L++KEDQ +YLEE ++K+++NKHS+FI YP     EK
Sbjct:  129 AYLIADRVTVTSKNNDDEQYVWESSAGGSFTVKADNS-EPLGRGTKIXLYIKEDQTDYLEESKIKEIVNKHSQFIGYPXKXXXEK 212          
BLAST of DY258598 vs. ExPASy Swiss-Prot
Match: HSC90_DICDI (Heat shock cognate 90 kDa protein OS=Dictyostelium discoideum GN=hspD PE=1 SV=2)

HSP 1 Score: 118.627 bits (296), Expect = 3.828e-26
Identity = 56/81 (69.14%), Postives = 69/81 (85.19%), Query Frame = 2
Query:    2 AYLVAEKVIVTAKHNDDEQYIWESQAGGSFTVTRDTSGEPLGRGTKITLHLKEDQLEYLEERRLKDLINKHSEFI*YPISL 244
            AYLVA+ VIV +K+NDDEQY+WES AGG FT+  D + EPLGRGTKI LH+KEDQL+YL+E ++K+L+ KHSEFI YPISL
Sbjct:  131 AYLVADTVIVHSKNNDDEQYVWESSAGGEFTIALDHT-EPLGRGTKIVLHMKEDQLDYLDETKIKNLVKKHSEFIQYPISL 210          
BLAST of DY258598 vs. ExPASy Swiss-Prot
Match: HSP90_CANAL (Heat shock protein 90 homolog OS=Candida albicans GN=HSP90 PE=1 SV=1)

HSP 1 Score: 117.087 bits (292), Expect = 1.114e-25
Identity = 54/84 (64.29%), Postives = 67/84 (79.76%), Query Frame = 2
Query:    5 YLVAEKVIVTAKHNDDEQYIWESQAGGSFTVTRDTSGEPLGRGTKITLHLKEDQLEYLEERRLKDLINKHSEFI*YPISLWIEK 256
            +LVA+ V V +KHNDDEQY+WES AGG FTVT D + E LGRGT + L LKEDQLEYLEE+R+K+++ KHSEF+ YPI L + K
Sbjct:  131 FLVADHVQVISKHNDDEQYVWESNAGGKFTVTLDETNERLGRGTMLRLFLKEDQLEYLEEKRIKEVVKKHSEFVAYPIQLVVTK 214          
BLAST of DY258598 vs. ExPASy Swiss-Prot
Match: HSP82_ASHGO (Heat shock protein HSP82 OS=Ashbya gossypii GN=HSP82 PE=3 SV=1)

HSP 1 Score: 116.701 bits (291), Expect = 1.455e-25
Identity = 54/84 (64.29%), Postives = 68/84 (80.95%), Query Frame = 2
Query:    5 YLVAEKVIVTAKHNDDEQYIWESQAGGSFTVTRDTSGEPLGRGTKITLHLKEDQLEYLEERRLKDLINKHSEFI*YPISLWIEK 256
            +LVA++V V +KHNDDEQYIWES AGGSFTVT D   E +GRGT + L LKEDQLEYLEE+R+K+++ +HSEF+ YPI L + K
Sbjct:  129 FLVADRVQVISKHNDDEQYIWESNAGGSFTVTLDEVNERIGRGTILRLFLKEDQLEYLEEKRIKEVVKRHSEFVAYPIQLLVTK 212          
BLAST of DY258598 vs. ExPASy Swiss-Prot
Match: ENPL_HORVU (Endoplasmin homolog OS=Hordeum vulgare PE=2 SV=1)

HSP 1 Score: 114.39 bits (285), Expect = 7.219e-25
Identity = 52/84 (61.90%), Postives = 67/84 (79.76%), Query Frame = 2
Query:    5 YLVAEKVIVTAKHNDDEQYIWESQAGGSFTVTRDTSGEPLGRGTKITLHLKEDQLEYLEERRLKDLINKHSEFI*YPISLWIEK 256
            YLVA+ V V +KHNDD+QY+WES+A GSF ++ DT  EPLGRGT+I LHL+++  EYLEE +LKDL+ K+SEFI +PI LW  K
Sbjct:  204 YLVADYVEVVSKHNDDKQYVWESKADGSFAISEDTWNEPLGRGTEIKLHLRDEAKEYLEEGKLKDLVKKYSEFINFPIYLWATK 287          
BLAST of DY258598 vs. ExPASy Swiss-Prot
Match: HSP85_TRYCR (Heat shock-like 85 kDa protein OS=Trypanosoma cruzi PE=3 SV=1)

HSP 1 Score: 113.62 bits (283), Expect = 1.231e-24
Identity = 59/85 (69.41%), Postives = 66/85 (77.65%), Query Frame = 2
Query:    2 AYLVAEKVIVTAKHNDDEQYIWESQAGGSFTVTRDTSGEPLGRGTKITLHLKEDQLEYLEERRLKDLINKHSEFI*YPISLWIEK 256
            AYLVA++V V +K+NDDE Y WES AGG+FTVT  T    L RGT+I LHLKEDQ EYLEERRLKDLI KHSEFI Y I L +EK
Sbjct:  126 AYLVADRVTVVSKNNDDEAYTWESSAGGTFTVT-PTPDCDLKRGTRIVLHLKEDQQEYLEERRLKDLIKKHSEFIGYDIELMVEK 209          
The following BLAST results are available for this feature:
BLAST of DY258598 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 90
Match NameE-valueIdentityDescription
HSP83_DROMI9.111e-2867.06Heat shock protein 83 (Fragment) OS=Drosophila mir... [more]
H90B3_HUMAN9.111e-2869.88Putative heat shock protein HSP 90-beta-3 OS=Homo ... [more]
HSP90_ASPFU4.522e-2765.88Heat shock protein 90 OS=Aspergillus fumigatus GN=... [more]
HSP90_SCHPO1.316e-2668.24Heat shock protein 90 homolog OS=Schizosaccharomyc... [more]
HSP83_DROPB2.931e-2664.71Heat shock protein 83 (Fragment) OS=Drosophila pse... [more]
HSC90_DICDI3.828e-2669.14Heat shock cognate 90 kDa protein OS=Dictyostelium... [more]
HSP90_CANAL1.114e-2564.29Heat shock protein 90 homolog OS=Candida albicans ... [more]
HSP82_ASHGO1.455e-2564.29Heat shock protein HSP82 OS=Ashbya gossypii GN=HSP... [more]
ENPL_HORVU7.219e-2561.90Endoplasmin homolog OS=Hordeum vulgare PE=2 SV=1[more]
HSP85_TRYCR1.231e-2469.41Heat shock-like 85 kDa protein OS=Trypanosoma cruz... [more]

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Properties
Property NameValue
Genbank descriptionKN0AAI2CB11FM1 AbsDev1 Citrus clementina cDNA 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DY258598 ID=DY258598; Name=DY258598; organism=Citrus clementina; type=EST; length=783bp
AGCTTACTTGGTTGCTGAGAAGGTTATTGTTACCGCCAAGCACAACGATG
ATGAGCAGTACATCTGGGAGTCTCAGGCTGGTGGATCATTCACTGTTACC
AGGGACACTTCTGGTGAGCCTCTTGGCCGCGGTACAAAGATCACTCTCCA
CCTCAAGGAAGACCAACTTGAGTACCTTGAGGAGCGCCGTTTGAAAGATT
TGATTAACAAACACTCTGAGTTCATTTAGTACCCAATTTCCCTCTGGATT
GAGAAAACCCCTGAGAAGGAAATTTCTGATGATGAGGACAAGGAAGAAAA
AAAGGAATGAGAGGGGAAAGCTGAGGATGTTGAAGAAGAAGAAAAAAAAG
AAAAACAAAAAAAAAAAAAAATCAGGAAGGGGTCCCAGGAGGGTCCTTTG
TGGAAACACCAAAAACCCCTTTGGAAGAAGAAACCCCAAGGAAATAAAAA
AAAAAAATTAGCCTGCCCCCCCCAAAAATCCGAAAAAGGACGGGAGAGAA
ACTTGTGCTGGGAACCCTTCTCCATGGAAGGGCCCCCTTGGAGTTTAAGG
TATTCCCCTTTTGTCCCCAAGAAGGCACCCTTTTTTATCCCTTTGAAAAA
AAGGAAAAAAAACCCAAAAAACTTCCACTCCCCCCCCCCCCCCCCGGGGC
CCTCCTCCAGGAAAAAAAAAGGGGGAAAAAAGATTAAAACCCCCCCAAAA
AACACTCGTGTTTTTTTGTTTTAGAAGGGGGGGTGGTTTGTGTGAATTTT
CCCCCCCAAAAGAAACATCCCCCCCCCCCCCCC
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