DY258598

Overview
NameDY258598
Unique NameDY258598
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length783
Libraries
Library NameType
AbsDev1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
DY258598_ssr332 microsatellite DY258598_ssr332:332..343. BLAST: Citrus ESTs to Prunus persica proteins V1
Homology
BLAST of DY258598 vs. ExPASy Swiss-Prot
Match: HSP83_LEIIN (Heat shock protein 83-1 OS=Leishmania infantum GN=HSP83-1 PE=3 SV=2)

HSP 1 Score: 113.62 bits (283), Expect = 1.231e-24
Identity = 56/86 (65.12%), Postives = 68/86 (79.07%), Query Frame = 2
Query:    2 AYLVAEKVIVTAKHNDDEQYIWESQAGGSFTVTRDTSGEPLGRGTKITLHLKEDQLEYLEERRLKDLINKHSEFI*YPISLWIEKT 259
            AYLVA++V VT+K+N DE Y+WES A G+FT+T  T    + RGT+ITLHLKEDQ+EYLE RRLK+LI KHSEFI Y I L +EKT
Sbjct:  126 AYLVADRVTVTSKNNSDESYVWESSACGTFTIT-STPESDMKRGTRITLHLKEDQMEYLEPRRLKELIKKHSEFIGYDIELMVEKT 210          
BLAST of DY258598 vs. ExPASy Swiss-Prot
Match: ENPL_ARATH (Endoplasmin homolog OS=Arabidopsis thaliana GN=SHD PE=1 SV=1)

HSP 1 Score: 113.62 bits (283), Expect = 1.231e-24
Identity = 51/85 (60.00%), Postives = 67/85 (78.82%), Query Frame = 2
Query:    2 AYLVAEKVIVTAKHNDDEQYIWESQAGGSFTVTRDTSGEPLGRGTKITLHLKEDQLEYLEERRLKDLINKHSEFI*YPISLWIEK 256
            AYLVA+ + V +KHNDD QY+WES+A G F V+ DT  EPLGRGT+I LHL+++  EYLEE +LK+L+ ++SEFI +PISLW  K
Sbjct:  202 AYLVADYIEVISKHNDDSQYVWESKANGKFAVSEDTWNEPLGRGTEIRLHLRDEAGEYLEESKLKELVKRYSEFINFPISLWASK 286          
BLAST of DY258598 vs. ExPASy Swiss-Prot
Match: HSP83_DROPE (Heat shock protein 83 (Fragment) OS=Drosophila persimilis GN=Hsp83 PE=3 SV=1)

HSP 1 Score: 112.849 bits (281), Expect = 2.101e-24
Identity = 52/85 (61.18%), Postives = 69/85 (81.18%), Query Frame = 2
Query:    2 AYLVAEKVIVTAKHNDDEQYIWESQAGGSFTVTRDTSGEPLGRGTKITLHLKEDQLEYLEERRLKDLINKHSEFI*YPISLWIEK 256
            AYL+A++V VT+K+NDDEQY+WES   GSFT   D + EPL RGTKI L++KEDQ +YLEE ++K+++NKHS+FI YPI L +EK
Sbjct:  129 AYLIADRVTVTSKNNDDEQYVWESXXXGSFTXKAD-NXEPLXRGTKIXLYIKEDQTDYLEESKIKEIVNKHSQFIGYPIKLLVEK 212          
BLAST of DY258598 vs. ExPASy Swiss-Prot
Match: HSP82_YEAST (ATP-dependent molecular chaperone HSP82 OS=Saccharomyces cerevisiae GN=HSP82 PE=1 SV=1)

HSP 1 Score: 112.079 bits (279), Expect = 3.583e-24
Identity = 53/84 (63.10%), Postives = 67/84 (79.76%), Query Frame = 2
Query:    5 YLVAEKVIVTAKHNDDEQYIWESQAGGSFTVTRDTSGEPLGRGTKITLHLKEDQLEYLEERRLKDLINKHSEFI*YPISLWIEK 256
            +LVA++V V +K NDDEQYIWES AGGSFTVT D   E +GRGT + L LK+DQLEYLEE+R+K++I +HSEF+ YPI L + K
Sbjct:  128 FLVADRVQVISKSNDDEQYIWESNAGGSFTVTLDEVNERIGRGTILRLFLKDDQLEYLEEKRIKEVIKRHSEFVAYPIQLVVTK 211          
BLAST of DY258598 vs. ExPASy Swiss-Prot
Match: HSC82_YEAST (ATP-dependent molecular chaperone HSC82 OS=Saccharomyces cerevisiae GN=HSC82 PE=1 SV=4)

HSP 1 Score: 112.079 bits (279), Expect = 3.583e-24
Identity = 52/84 (61.90%), Postives = 68/84 (80.95%), Query Frame = 2
Query:    5 YLVAEKVIVTAKHNDDEQYIWESQAGGSFTVTRDTSGEPLGRGTKITLHLKEDQLEYLEERRLKDLINKHSEFI*YPISLWIEK 256
            +LVA++V V +K+N+DEQYIWES AGGSFTVT D   E +GRGT + L LK+DQLEYLEE+R+K++I +HSEF+ YPI L + K
Sbjct:  128 FLVADRVQVISKNNEDEQYIWESNAGGSFTVTLDEVNERIGRGTVLRLFLKDDQLEYLEEKRIKEVIKRHSEFVAYPIQLLVTK 211          
BLAST of DY258598 vs. ExPASy Swiss-Prot
Match: HSP82_AJECA (Heat shock protein 82 OS=Ajellomyces capsulata GN=HSP82 PE=3 SV=1)

HSP 1 Score: 111.694 bits (278), Expect = 4.679e-24
Identity = 52/85 (61.18%), Postives = 66/85 (77.65%), Query Frame = 2
Query:    2 AYLVAEKVIVTAKHNDDEQYIWESQAGGSFTVTRDTSGEPLGRGTKITLHLKEDQLEYLEERRLKDLINKHSEFI*YPISLWIEK 256
            AYLVA+KV V +K NDDEQYIWES AGG+F VT+D  G  +GRGTK+ LHLK++Q EYL E ++K+++ K SEFI YPI L + K
Sbjct:  127 AYLVADKVTVISKSNDDEQYIWESNAGGTFKVTQDDDGRAIGRGTKMILHLKDEQTEYLNESKIKEVVKKQSEFIFYPIYLHVLK 211          
BLAST of DY258598 vs. ExPASy Swiss-Prot
Match: HSP83_TRYBB (Heat shock protein 83 OS=Trypanosoma brucei brucei GN=HSP83 PE=3 SV=1)

HSP 1 Score: 111.309 bits (277), Expect = 6.112e-24
Identity = 57/86 (66.28%), Postives = 66/86 (76.74%), Query Frame = 2
Query:    2 AYLVAEKVIVTAKHNDDEQYIWESQAGGSFTVTRDTSGEPLGRGTKITLHLKEDQLEYLEERRLKDLINKHSEFI*YPISLWIEKT 259
            AYLVA++V V +K+N+D+ Y WES AGG+FTVT  T    L RGT+I LHLKEDQ EYLEERRLKDLI KHSEFI Y I L +E T
Sbjct:  126 AYLVADRVTVVSKNNEDDAYTWESSAGGTFTVT-STPDCDLKRGTRIVLHLKEDQQEYLEERRLKDLIKKHSEFIGYDIELMVENT 210          
BLAST of DY258598 vs. ExPASy Swiss-Prot
Match: HSP90_BRUPA (Heat shock protein 90 OS=Brugia pahangi GN=HSP90 PE=2 SV=2)

HSP 1 Score: 110.923 bits (276), Expect = 7.982e-24
Identity = 52/85 (61.18%), Postives = 68/85 (80.00%), Query Frame = 2
Query:    2 AYLVAEKVIVTAKHNDDEQYIWESQAGGSFTVTRDTSGEPLGRGTKITLHLKEDQLEYLEERRLKDLINKHSEFI*YPISLWIEK 256
            A+LVA+KV+V +KHNDD+ Y WES AGGSF + R  +   L RGTKITL++KEDQ +YLEERR+K+++ KHS+FI YPI L +EK
Sbjct:  131 AFLVADKVVVASKHNDDDCYQWESSAGGSFII-RQVNDPELTRGTKITLYIKEDQTDYLEERRIKEIVKKHSQFIGYPIKLTVEK 214          
BLAST of DY258598 vs. ExPASy Swiss-Prot
Match: HSP90_PODAN (Heat shock protein 90 homolog OS=Podospora anserina GN=MOD-E PE=3 SV=1)

HSP 1 Score: 110.153 bits (274), Expect = 1.362e-23
Identity = 51/85 (60.00%), Postives = 69/85 (81.18%), Query Frame = 2
Query:    2 AYLVAEKVIVTAKHNDDEQYIWESQAGGSFTVTRDTSGEPLGRGTKITLHLKEDQLEYLEERRLKDLINKHSEFI*YPISLWIEK 256
            AYLVA++V V +K+NDDEQYIWES AGG+F ++ D +G  +GRGTKI LHLK++Q +YL E ++K++I KHSEFI YPI L ++K
Sbjct:  126 AYLVADRVTVVSKNNDDEQYIWESSAGGTFNISPD-NGPSIGRGTKIILHLKDEQTDYLNESKIKEVIKKHSEFISYPIYLHVQK 209          
BLAST of DY258598 vs. ExPASy Swiss-Prot
Match: HSP83_LEIAM (Heat shock protein 83 OS=Leishmania amazonensis GN=HSP83 PE=3 SV=1)

HSP 1 Score: 108.227 bits (269), Expect = 5.174e-23
Identity = 54/86 (62.79%), Postives = 66/86 (76.74%), Query Frame = 2
Query:    2 AYLVAEKVIVTAKHNDDEQYIWESQAGGSFTVTRDTSGEPLGRGTKITLHLKEDQLEYLEERRLKDLINKHSEFI*YPISLWIEKT 259
            AYLVA++V VT+K+N DE Y+WES AGG+FT+T     + +    +ITLHLKEDQLEYLE RRLK+LI KHSEFI Y I L +EKT
Sbjct:  126 AYLVADRVTVTSKNNSDEVYVWESSAGGTFTITSAPESD-MKLPARITLHLKEDQLEYLEARRLKELIKKHSEFIGYDIELMVEKT 210          
The following BLAST results are available for this feature:
BLAST of DY258598 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 90
Match NameE-valueIdentityDescription
HSP83_LEIIN1.231e-2465.12Heat shock protein 83-1 OS=Leishmania infantum GN=... [more]
ENPL_ARATH1.231e-2460.00Endoplasmin homolog OS=Arabidopsis thaliana GN=SHD... [more]
HSP83_DROPE2.101e-2461.18Heat shock protein 83 (Fragment) OS=Drosophila per... [more]
HSP82_YEAST3.583e-2463.10ATP-dependent molecular chaperone HSP82 OS=Sacchar... [more]
HSC82_YEAST3.583e-2461.90ATP-dependent molecular chaperone HSC82 OS=Sacchar... [more]
HSP82_AJECA4.679e-2461.18Heat shock protein 82 OS=Ajellomyces capsulata GN=... [more]
HSP83_TRYBB6.112e-2466.28Heat shock protein 83 OS=Trypanosoma brucei brucei... [more]
HSP90_BRUPA7.982e-2461.18Heat shock protein 90 OS=Brugia pahangi GN=HSP90 P... [more]
HSP90_PODAN1.362e-2360.00Heat shock protein 90 homolog OS=Podospora anserin... [more]
HSP83_LEIAM5.174e-2362.79Heat shock protein 83 OS=Leishmania amazonensis GN... [more]

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Properties
Property NameValue
Genbank descriptionKN0AAI2CB11FM1 AbsDev1 Citrus clementina cDNA 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DY258598 ID=DY258598; Name=DY258598; organism=Citrus clementina; type=EST; length=783bp
AGCTTACTTGGTTGCTGAGAAGGTTATTGTTACCGCCAAGCACAACGATG
ATGAGCAGTACATCTGGGAGTCTCAGGCTGGTGGATCATTCACTGTTACC
AGGGACACTTCTGGTGAGCCTCTTGGCCGCGGTACAAAGATCACTCTCCA
CCTCAAGGAAGACCAACTTGAGTACCTTGAGGAGCGCCGTTTGAAAGATT
TGATTAACAAACACTCTGAGTTCATTTAGTACCCAATTTCCCTCTGGATT
GAGAAAACCCCTGAGAAGGAAATTTCTGATGATGAGGACAAGGAAGAAAA
AAAGGAATGAGAGGGGAAAGCTGAGGATGTTGAAGAAGAAGAAAAAAAAG
AAAAACAAAAAAAAAAAAAAATCAGGAAGGGGTCCCAGGAGGGTCCTTTG
TGGAAACACCAAAAACCCCTTTGGAAGAAGAAACCCCAAGGAAATAAAAA
AAAAAAATTAGCCTGCCCCCCCCAAAAATCCGAAAAAGGACGGGAGAGAA
ACTTGTGCTGGGAACCCTTCTCCATGGAAGGGCCCCCTTGGAGTTTAAGG
TATTCCCCTTTTGTCCCCAAGAAGGCACCCTTTTTTATCCCTTTGAAAAA
AAGGAAAAAAAACCCAAAAAACTTCCACTCCCCCCCCCCCCCCCCGGGGC
CCTCCTCCAGGAAAAAAAAAGGGGGAAAAAAGATTAAAACCCCCCCAAAA
AACACTCGTGTTTTTTTGTTTTAGAAGGGGGGGTGGTTTGTGTGAATTTT
CCCCCCCAAAAGAAACATCCCCCCCCCCCCCCC
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