DY258604

Overview
NameDY258604
Unique NameDY258604
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length793
Libraries
Library NameType
AbsDev1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Ccv1_Contig5656 contig Ccv1_Contig5656:346..1138. BLAST: Citrus Unigene V1 Contigs to Populus V2 proteins
Homology
BLAST of DY258604 vs. ExPASy Swiss-Prot
Match: DUT_CAMPS (Deoxyuridine 5'-triphosphate nucleotidohydrolase OS=Camelpox virus (strain CMS) GN=DUT PE=3 SV=1)

HSP 1 Score: 142.124 bits (357), Expect = 3.300e-33
Identity = 76/145 (52.41%), Postives = 100/145 (68.97%), Query Frame = 3
Query:  108 NDNIGSLLRVKKLSEKAVLPKRGSPLAAGYDLSSAAETKVPARGKALVPTDLSIAIPEGTYARIAPRSGLAWKHSMDVGAGVIDADYRGPVGVILFNHSDVDFVVKVGDRIAQLIIEKIVTPDVLEVENLDSTVRGEGGFGSTGV 542
            N NI S +R  K + +A  P R SP AAGYDL SA    +P   + L+ TD+S+++P+  Y RIAPRSGL+ K  +D+G GVID DYRG +GVIL N+    F V  GDRIAQLI ++I  P++ EV++LDST RG+ GFGSTG+
Sbjct:    3 NMNINSPVRFVKETNRAKSPTRQSPYAAGYDLYSAYYYTIPPGERQLIKTDISMSMPKFCYGRIAPRSGLSLK-GIDIGGGVIDEDYRGNIGVILINNGKCTFNVNTGDRIAQLIYQRIYYPELKEVQSLDSTDRGDQGFGSTGL 146          
BLAST of DY258604 vs. ExPASy Swiss-Prot
Match: DUT_CAMPM (Deoxyuridine 5'-triphosphate nucleotidohydrolase OS=Camelpox virus (strain M-96) GN=DUT PE=3 SV=1)

HSP 1 Score: 142.124 bits (357), Expect = 3.300e-33
Identity = 76/145 (52.41%), Postives = 100/145 (68.97%), Query Frame = 3
Query:  108 NDNIGSLLRVKKLSEKAVLPKRGSPLAAGYDLSSAAETKVPARGKALVPTDLSIAIPEGTYARIAPRSGLAWKHSMDVGAGVIDADYRGPVGVILFNHSDVDFVVKVGDRIAQLIIEKIVTPDVLEVENLDSTVRGEGGFGSTGV 542
            N NI S +R  K + +A  P R SP AAGYDL SA    +P   + L+ TD+S+++P+  Y RIAPRSGL+ K  +D+G GVID DYRG +GVIL N+    F V  GDRIAQLI ++I  P++ EV++LDST RG+ GFGSTG+
Sbjct:    3 NMNINSPVRFVKETNRAKSPTRQSPYAAGYDLYSAYYYTIPPGERQLIKTDISMSMPKFCYGRIAPRSGLSLK-GIDIGGGVIDEDYRGNIGVILINNGKCTFNVNTGDRIAQLIYQRIYYPELKEVQSLDSTDRGDQGFGSTGL 146          
BLAST of DY258604 vs. ExPASy Swiss-Prot
Match: DUT_VACCP (Deoxyuridine 5'-triphosphate nucleotidohydrolase OS=Vaccinia virus (strain L-IVP) GN=DUT PE=3 SV=1)

HSP 1 Score: 141.739 bits (356), Expect = 4.310e-33
Identity = 76/145 (52.41%), Postives = 101/145 (69.66%), Query Frame = 3
Query:  108 NDNIGSLLRVKKLSEKAVLPKRGSPLAAGYDLSSAAETKVPARGKALVPTDLSIAIPEGTYARIAPRSGLAWKHSMDVGAGVIDADYRGPVGVILFNHSDVDFVVKVGDRIAQLIIEKIVTPDVLEVENLDSTVRGEGGFGSTGV 542
            N NI S +R  K + +A  P R SP AAGYDL SA +  +P   + L+ TD+S+++P+  Y RIAPRSGL+ K  +D+G GVID DYRG +GVIL N+    F V  GDRIAQLI ++I  P++ EV++LDST RG+ GFGSTG+
Sbjct:    3 NMNINSPVRFVKETNRAKSPTRQSPGAAGYDLYSAYDYTIPPGERQLIKTDISMSMPKICYGRIAPRSGLSLK-GIDIGGGVIDEDYRGNIGVILINNGKCTFNVNTGDRIAQLIYQRIYYPELEEVQSLDSTNRGDQGFGSTGL 146          
BLAST of DY258604 vs. ExPASy Swiss-Prot
Match: DUT_VACCC (Deoxyuridine 5'-triphosphate nucleotidohydrolase OS=Vaccinia virus (strain Copenhagen) GN=DUT PE=3 SV=1)

HSP 1 Score: 141.739 bits (356), Expect = 4.310e-33
Identity = 76/145 (52.41%), Postives = 101/145 (69.66%), Query Frame = 3
Query:  108 NDNIGSLLRVKKLSEKAVLPKRGSPLAAGYDLSSAAETKVPARGKALVPTDLSIAIPEGTYARIAPRSGLAWKHSMDVGAGVIDADYRGPVGVILFNHSDVDFVVKVGDRIAQLIIEKIVTPDVLEVENLDSTVRGEGGFGSTGV 542
            N NI S +R  K + +A  P R SP AAGYDL SA +  +P   + L+ TD+S+++P+  Y RIAPRSGL+ K  +D+G GVID DYRG +GVIL N+    F V  GDRIAQLI ++I  P++ EV++LDST RG+ GFGSTG+
Sbjct:    3 NMNINSPVRFVKETNRAKSPTRQSPGAAGYDLYSAYDYTIPPGERQLIKTDISMSMPKICYGRIAPRSGLSLK-GIDIGGGVIDEDYRGNIGVILINNGKCTFNVNTGDRIAQLIYQRIYYPELEEVQSLDSTNRGDQGFGSTGL 146          
BLAST of DY258604 vs. ExPASy Swiss-Prot
Match: DUT_VACCA (Deoxyuridine 5'-triphosphate nucleotidohydrolase OS=Vaccinia virus (strain Ankara) GN=DUT PE=3 SV=1)

HSP 1 Score: 141.739 bits (356), Expect = 4.310e-33
Identity = 76/145 (52.41%), Postives = 101/145 (69.66%), Query Frame = 3
Query:  108 NDNIGSLLRVKKLSEKAVLPKRGSPLAAGYDLSSAAETKVPARGKALVPTDLSIAIPEGTYARIAPRSGLAWKHSMDVGAGVIDADYRGPVGVILFNHSDVDFVVKVGDRIAQLIIEKIVTPDVLEVENLDSTVRGEGGFGSTGV 542
            N NI S +R  K + +A  P R SP AAGYDL SA +  +P   + L+ TD+S+++P+  Y RIAPRSGL+ K  +D+G GVID DYRG +GVIL N+    F V  GDRIAQLI ++I  P++ EV++LDST RG+ GFGSTG+
Sbjct:    3 NMNINSPVRFVKETNRAKSPTRQSPGAAGYDLYSAYDYTIPPGERQLIKTDISMSMPKICYGRIAPRSGLSLK-GIDIGGGVIDEDYRGNIGVILINNGKCTFNVNTGDRIAQLIYQRIYYPELEEVQSLDSTNRGDQGFGSTGL 146          
BLAST of DY258604 vs. ExPASy Swiss-Prot
Match: DUT_CWPXG (Deoxyuridine 5'-triphosphate nucleotidohydrolase OS=Cowpox virus (strain GRI-90 / Grishak) GN=DUT PE=3 SV=1)

HSP 1 Score: 140.969 bits (354), Expect = 7.352e-33
Identity = 76/145 (52.41%), Postives = 100/145 (68.97%), Query Frame = 3
Query:  108 NDNIGSLLRVKKLSEKAVLPKRGSPLAAGYDLSSAAETKVPARGKALVPTDLSIAIPEGTYARIAPRSGLAWKHSMDVGAGVIDADYRGPVGVILFNHSDVDFVVKVGDRIAQLIIEKIVTPDVLEVENLDSTVRGEGGFGSTGV 542
            N NI S +R  K + +A  P R SP AAGYDL SA +  +P   + L+ TD+S+++P+  Y RIAPRSGL+ K  +D+G GVID DYRG +GVIL N+    F V  GDRIAQLI ++I  P++ EV++LDST RG  GFGSTG+
Sbjct:    3 NMNINSPVRFVKETNRAKSPTRQSPGAAGYDLYSAYDYTIPPGERQLIKTDISMSMPKFCYGRIAPRSGLSLK-GIDIGGGVIDEDYRGNIGVILINNGKCTFNVNTGDRIAQLIYQRIYYPELEEVQSLDSTDRGAQGFGSTGL 146          
BLAST of DY258604 vs. ExPASy Swiss-Prot
Match: DUT_FOWPV (Deoxyuridine 5'-triphosphate nucleotidohydrolase OS=Fowlpox virus GN=DUT PE=3 SV=1)

HSP 1 Score: 139.428 bits (350), Expect = 2.139e-32
Identity = 73/139 (52.52%), Postives = 95/139 (68.35%), Query Frame = 3
Query:  135 VKKLSEKAVLPKRGSPLAAGYDLSSAAETKVPARGKALVPTDLSIAIPEGTYARIAPRSGLAWKHSMDVGAGVIDADYRGPVGVILFNHSDVDFVVKVGDRIAQLIIEKIVTPDVLEV---ENLDSTVRGEGGFGSTGV 542
            V K+S++A LP + +  +AGYDL SA +  +    K L+ TD+ + IP G Y RIAPRSGLA+ + +DVGAGVID+DYRG VGV+LFN     F V  GDRIAQ+I EKI  P ++EV   E ++ T RG  GFGSTG+
Sbjct:    6 VYKISDRAKLPYKQTSYSAGYDLYSAYDYVIEPMNKELIKTDIILKIPNGYYGRIAPRSGLAYNYFIDVGAGVIDSDYRGNVGVLLFNFGSTQFNVCKGDRIAQIIFEKIAYPKIIEVTTLEEINITDRGNSGFGSTGL 144          
BLAST of DY258604 vs. ExPASy Swiss-Prot
Match: DUT_YMTV (Deoxyuridine 5'-triphosphate nucleotidohydrolase OS=Yaba monkey tumor virus GN=DUT PE=3 SV=1)

HSP 1 Score: 136.732 bits (343), Expect = 1.386e-31
Identity = 66/139 (47.48%), Postives = 95/139 (68.35%), Query Frame = 3
Query:  126 LLRVKKLSEKAVLPKRGSPLAAGYDLSSAAETKVPARGKALVPTDLSIAIPEGTYARIAPRSGLAWKHSMDVGAGVIDADYRGPVGVILFNHSDVDFVVKVGDRIAQLIIEKIVTPDVLEVENLDSTVRGEGGFGSTGV 542
            ++ VKK SE A +P R S  +AGYDL SA +  V  + + LV TD+ ++IP+  Y RIA RSGL+  +S+D+G GVID DYRG +GVI  N+ +    +K GDRIAQ++ E++   ++ E+ NLD T RG+ GFGS+G+
Sbjct:    5 IVYVKKSSEFATIPTRSSKKSAGYDLYSAYDYLVRPKSRVLVKTDICLSIPDECYGRIASRSGLSLNNSIDIGGGVIDGDYRGVIGVIFINNGNSPHYIKRGDRIAQIVFERLANVEIKEISNLDCTCRGDCGFGSSGI 143          
BLAST of DY258604 vs. ExPASy Swiss-Prot
Match: DUT_SWPVK (Deoxyuridine 5'-triphosphate nucleotidohydrolase OS=Swinepox virus (strain Kasza) GN=DUT PE=3 SV=1)

HSP 1 Score: 132.109 bits (331), Expect = 3.415e-30
Identity = 64/134 (47.76%), Postives = 91/134 (67.91%), Query Frame = 3
Query:  141 KLSEKAVLPKRGSPLAAGYDLSSAAETKVPARGKALVPTDLSIAIPEGTYARIAPRSGLAWKHSMDVGAGVIDADYRGPVGVILFNHSDVDFVVKVGDRIAQLIIEKIVTPDVLEVENLDSTVRGEGGFGSTGV 542
            KLS  A++P R    +AGYDL SA    V    + LV TD+ + IP+  Y RI+PRSGL+  +++D+G GVID+DYRG +G++  N+   DF +KVGDRIAQ+I E++  P + EV+ L+ T RG  GFGS+G+
Sbjct:    9 KLSNNAIIPNRSMSGSAGYDLYSAYSYTVKPYNRILVRTDICLMIPDKCYGRISPRSGLSLNYNIDIGGGVIDSDYRGEIGIVFINNGCSDFNIKVGDRIAQIIFERVEYPIMEEVKCLEDTERGNSGFGSSGM 142          
BLAST of DY258604 vs. ExPASy Swiss-Prot
Match: 438L_IIV6 (Probable deoxyuridine 5'-triphosphate nucleotidohydrolase OS=Invertebrate iridescent virus 6 GN=IIV6-438L PE=3 SV=1)

HSP 1 Score: 129.413 bits (324), Expect = 2.214e-29
Identity = 67/140 (47.86%), Postives = 92/140 (65.71%), Query Frame = 3
Query:  129 LRVKKLSEKAVLPKRGSPLAAGYDLSSAAETKVPARGKALVPTDLSIAIPEGTYARIAPRSGLAWKHSMDVGAGVIDADYRGPVGVILFNHSDVDFVVKVGDRIAQLIIEKIVTPDVL--EVENLDSTVRGEGGFGSTGV 542
            ++   L+E A  PKRGS  +AG DL SA E  VPA G  L+ TD  I  P+G + +I  RSGL+  H+++VGAG++DADYR  V V+L N S  DF V  GDRIAQL+    +TP+++  +  ++  TVRG+ GFGSTG+
Sbjct:  156 IKFAALTEYAQKPKRGSEFSAGIDLRSAYEYLVPANGNKLIKTDWKIQYPDGYFGKICSRSGLSLNHNLEVGAGIVDADYREGVSVVLNNLSPRDFHVAPGDRIAQLVCTPYITPEIVFCKPSDIPDTVRGKNGFGSTGI 295          
The following BLAST results are available for this feature:
BLAST of DY258604 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 440
Match NameE-valueIdentityDescription
DUT_CAMPS3.300e-3352.41Deoxyuridine 5'-triphosphate nucleotidohydrolase O... [more]
DUT_CAMPM3.300e-3352.41Deoxyuridine 5'-triphosphate nucleotidohydrolase O... [more]
DUT_VACCP4.310e-3352.41Deoxyuridine 5'-triphosphate nucleotidohydrolase O... [more]
DUT_VACCC4.310e-3352.41Deoxyuridine 5'-triphosphate nucleotidohydrolase O... [more]
DUT_VACCA4.310e-3352.41Deoxyuridine 5'-triphosphate nucleotidohydrolase O... [more]
DUT_CWPXG7.352e-3352.41Deoxyuridine 5'-triphosphate nucleotidohydrolase O... [more]
DUT_FOWPV2.139e-3252.52Deoxyuridine 5'-triphosphate nucleotidohydrolase O... [more]
DUT_YMTV1.386e-3147.48Deoxyuridine 5'-triphosphate nucleotidohydrolase O... [more]
DUT_SWPVK3.415e-3047.76Deoxyuridine 5'-triphosphate nucleotidohydrolase O... [more]
438L_IIV62.214e-2947.86Probable deoxyuridine 5'-triphosphate nucleotidohy... [more]

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Properties
Property NameValue
Genbank descriptionKN0AAI2CC08FM1 AbsDev1 Citrus clementina cDNA 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DY258604 ID=DY258604; Name=DY258604; organism=Citrus clementina; type=EST; length=793bp
CACTAAAGCTTGTTTTCAAAATGGCCCCAGCAGTTCAGCAAAATGGCAGC
CCAGAAGTCAAAGAGCCTTCTCCAAAGATCCCAAAACTACACCAGAACGG
CGTCGAAAATGACAACATAGGCTCTCTCTTGAGAGTTAAAAAGCTCTCCG
AAAAGGCTGTTTTGCCCAAAAGAGGCTCCCCTCTTGCCGCTGGCTACGAT
CTCTCCAGTGCTGCGGAGACTAAGGTGCCAGCAAGGGGAAAAGCTCTTGT
TCCAACAGATCTGAGCATCGCAATACCCGAAGGAACATATGCACGTATTG
CGCCAAGATCGGGACTGGCGTGGAAGCACTCAATGGACGTGGGAGCCGGG
GTGATTGATGCGGATTACAGGGGCCCTGTTGGGGTGATTTTGTTTAATCA
TTCTGATGTTGATTTTGTGGTGAAAGTGGGTGATAGAATTGCTCAATTAA
TAATTGAGAAAATCGTGACTCCTGATGTGTTGGAGGTTGAGAACTTGGAC
TCTACTGTCAGAGGAGAAGGTGGTTTTGGCTCTACTGGGGTTTGAATTTC
TTTGTTGAAGACTATGCGTTGTTGCATATGTTTTGTTTTTATGGTAATGT
TAGTTCAGGTCTCTGGGTAGTTTTGTCGGGCAGCTGGTGTACAGGCTATT
GGCTTGTTTTGCTGTCTTGATTTGTAAACAACTTGGTAAGTAGTATTGGC
ATGGAAGAAATGGCATGTATCCTCTTGTTGTTTCTATCTATATAACAACA
TTTGGGTTTGTTTTGGCTGTAAATTTACTGATGCTAAGCTTAT
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