DY258604
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of DY258604 vs. ExPASy Swiss-Prot
Match: DUT_CHLTE (Deoxyuridine 5'-triphosphate nucleotidohydrolase OS=Chlorobium tepidum GN=dut PE=3 SV=2) HSP 1 Score: 124.79 bits (312), Expect = 5.452e-28 Identity = 68/142 (47.89%), Postives = 91/142 (64.08%), Query Frame = 3 Query: 129 LRVKKLSEKAVLPKRGSPLAAGYDLSSA--AETKVPARGKALVPTDLSIAIPEGTYARIAPRSGLAWKH--SMDVGAGVIDADYRGPVGVILFNHSDVDFVVKVGDRIAQLIIEKIVTPDVLEVENLDSTVRGEGGFGSTGV 542 +++ +L++KA+LP + AAG D+S+ A VP+ AL+PT +I +PEG A++ PRSGLA +H S+ IDADYRG VGVIL NH F V GDRIAQ+++ K+ EVE+L T RGEGGFG TGV Sbjct: 4 VKIVRLNQKAILPVYATAHAAGMDVSACLDAPVTVPSSASALIPTGFAIELPEGYEAQLRPRSGLALRHCISLPNSPATIDADYRGEVGVILINHGREPFTVSHGDRIAQMVVAKVDHVVFEEVESLSETARGEGGFGHTGV 145
BLAST of DY258604 vs. ExPASy Swiss-Prot
Match: DUT_PELCD (Deoxyuridine 5'-triphosphate nucleotidohydrolase OS=Pelobacter carbinolicus (strain DSM 2380 / Gra Bd 1) GN=dut PE=3 SV=1) HSP 1 Score: 122.094 bits (305), Expect = 3.534e-27 Identity = 67/141 (47.52%), Postives = 90/141 (63.83%), Query Frame = 3 Query: 129 LRVKKLSEKAVLPKRGSPLAAGYDLSSAAETKVPARG--KALVPTDLSIAIPEGTYARIAPRSGLAWKHSMDV--GAGVIDADYRGPVGVILFNHSDVDFVVKVGDRIAQLIIEKIVTPDVLEVENLDSTVRGEGGFGSTG 539 ++VK+L KA+LP SP AAG DL + + +V + + +VPT +++AIP G ++ PRSGLA H + + G IDADYRG +G+I+ NH D DFVV GDRIAQL+I + + VE LD T R EGGFG TG Sbjct: 6 IKVKRLHSKAMLPAYMSPHAAGMDLYACPDGEVVVKPGCRTIVPTGIALAIPVGYEGQVRPRSGLALHHGVTLVNTPGTIDADYRGELGIIIINHGDEDFVVSPGDRIAQLVIAPVHRAVLETVEELDETDRNEGGFGHTG 146
BLAST of DY258604 vs. ExPASy Swiss-Prot
Match: DUT_CYAA5 (Deoxyuridine 5'-triphosphate nucleotidohydrolase OS=Cyanothece sp. (strain ATCC 51142) GN=dut PE=3 SV=1) HSP 1 Score: 121.709 bits (304), Expect = 4.615e-27 Identity = 65/140 (46.43%), Postives = 86/140 (61.43%), Query Frame = 3 Query: 129 LRVKKLSEKAVLPKRGSPLAAGYDLSSAAETKVPARGKALVPTDLSIAIPEGTYARIAPRSGLAWKHSMDV--GAGVIDADYRGPVGVILFNHSDVDFVVKVGDRIAQLIIEKIVTPDVLEVENLDSTVRGEGGFGSTGV 542 +++ KL EKA++PK +G DL S ++P+ LV T +SI +P T A+I PRSGLA KH + V G ID YRG +GVIL NH F V G RIAQ++I ++ + EVE L T+RG+GGFGSTGV Sbjct: 3 IKIIKLKEKAIIPKYEHDNDSGLDLVSTETVEIPSGESKLVKTGISIELPPNTEAQIRPRSGLALKHQITVLNTPGTIDEGYRGEIGVILINHGKRSFKVTEGMRIAQMVIAPVIRVKIQEVEQLSDTIRGQGGFGSTGV 142
BLAST of DY258604 vs. ExPASy Swiss-Prot
Match: DUT_WOLSU (Deoxyuridine 5'-triphosphate nucleotidohydrolase OS=Wolinella succinogenes GN=dut PE=3 SV=1) HSP 1 Score: 120.553 bits (301), Expect = 1.028e-26 Identity = 64/139 (46.04%), Postives = 88/139 (63.31%), Query Frame = 3 Query: 129 LRVKKLSEKAVLPKRGSPLAAGYDLSSAAETKVPARGKALVPTDLSIAIPEGTYARIAPRSGLAWKHSMDV--GAGVIDADYRGPVGVILFNHSDVDFVVKVGDRIAQLIIEKIVTPDVLEVENLDSTVRGEGGFGSTG 539 +R+ KL AV+P S AAG+DL ++P G+ALV T L++A+ EG +I PRSGLA KH + V G +D+DYRG + VIL N F ++ GDRIAQ ++ ++ ++ EVE+LD T RG GGFGSTG Sbjct: 9 IRLLKLHPNAVIPAYQSAGAAGFDLCCVESLEIPPLGRALVSTGLALALEEGYELQIRPRSGLALKHGITVLNTPGTVDSDYRGEIKVILINLGAESFSIQAGDRIAQGVVSRLSIAELCEVESLDETARGAGGFGSTG 147
BLAST of DY258604 vs. ExPASy Swiss-Prot
Match: DUT_CHLP8 (Deoxyuridine 5'-triphosphate nucleotidohydrolase OS=Chlorobaculum parvum (strain NCIB 8327) GN=dut PE=3 SV=1) HSP 1 Score: 120.553 bits (301), Expect = 1.028e-26 Identity = 67/142 (47.18%), Postives = 88/142 (61.97%), Query Frame = 3 Query: 129 LRVKKLSEKAVLPKRGSPLAAGYDLSSAAETKVPAR--GKALVPTDLSIAIPEGTYARIAPRSGLAWKH--SMDVGAGVIDADYRGPVGVILFNHSDVDFVVKVGDRIAQLIIEKIVTPDVLEVENLDSTVRGEGGFGSTGV 542 +++ +L EKA LP + AAG D+S+ + V AL+PT L+I +PEG A++ PRSGLA +H S+ IDADYRG VGVIL NH F V GDRIAQ+++ K+ EV++L T RGEGGFG TGV Sbjct: 4 VKIVRLKEKASLPAYATAHAAGMDVSACLDAPVTLEPSSSALIPTGLAIELPEGYEAQLRPRSGLALRHLISLPNSPATIDADYRGEVGVILINHGREPFTVNHGDRIAQMVVSKVDRVAFEEVDSLSDTERGEGGFGHTGV 145
BLAST of DY258604 vs. ExPASy Swiss-Prot
Match: DUT_ACAM1 (Deoxyuridine 5'-triphosphate nucleotidohydrolase OS=Acaryochloris marina (strain MBIC 11017) GN=dut PE=3 SV=1) HSP 1 Score: 120.168 bits (300), Expect = 1.343e-26 Identity = 64/139 (46.04%), Postives = 88/139 (63.31%), Query Frame = 3 Query: 129 LRVKKLSEKAVLPKRGSPLAAGYDLSSAAETKVPARGKALVPTDLSIAIPEGTYARIAPRSGLAWKHSMDV--GAGVIDADYRGPVGVILFNHSDVDFVVKVGDRIAQLIIEKIVTPDVLEVENLDSTVRGEGGFGSTG 539 +++ KL+E A +P+ AG DL + K+ AL+PT ++I +P+GT A++ PRSGLA KHS+ V G IDA YRG +GVIL NH F V G +IAQ++I I+ ++ EV L +T RGEGGFGSTG Sbjct: 3 IKIIKLTESAQVPRYSHADDAGLDLFAIEAQKILPGASALIPTGIAIELPQGTEAQVRPRSGLALKHSITVLNSPGTIDAGYRGEIGVILINHGQETFQVVEGMKIAQMVIAPIMRAEIEEVTELSATQRGEGGFGSTG 141
BLAST of DY258604 vs. ExPASy Swiss-Prot
Match: DUT_RHOPS (Deoxyuridine 5'-triphosphate nucleotidohydrolase OS=Rhodopseudomonas palustris (strain BisB5) GN=dut PE=3 SV=1) HSP 1 Score: 119.013 bits (297), Expect = 2.992e-26 Identity = 69/150 (46.00%), Postives = 90/150 (60.00%), Query Frame = 3 Query: 108 NDNIGSLLRVKKLSEKAVLPKRGSPLAAGYDLSSAAETKVP---ARGK-ALVPTDLSIAIPEGTYARIAPRSGLAWKHSMDV--GAGVIDADYRGPVGVILFNHSDVDFVVKVGDRIAQLIIEKIVTPDVLEVENLDSTVRGEGGFGSTG 539 +D I ++ +E LP S AAG DL +A P A G LVPT L+IA+PE A++ PRSGLA KH + V G IDADYRG +GV+L NH D F ++ G+RIAQ++I +V +++ VE L T RG GGFGSTG Sbjct: 2 SDTIAVEIKQLPHAEGLPLPAYQSAHAAGLDLCAANSADAPLLLAPGSYVLVPTGLTIALPENYEAQVRPRSGLAAKHGVTVLNAPGTIDADYRGEIGVLLINHGDAPFTIRRGERIAQMVIAPVVRAELIGVETLSETARGVGGFGSTG 151
BLAST of DY258604 vs. ExPASy Swiss-Prot
Match: DUT_CYAP7 (Deoxyuridine 5'-triphosphate nucleotidohydrolase OS=Cyanothece sp. (strain PCC 7424) GN=dut PE=3 SV=1) HSP 1 Score: 117.857 bits (294), Expect = 6.665e-26 Identity = 63/140 (45.00%), Postives = 87/140 (62.14%), Query Frame = 3 Query: 129 LRVKKLSEKAVLPKRGSPLAAGYDLSSAAETKVPARGKALVPTDLSIAIPEGTYARIAPRSGLAWKHSMDV--GAGVIDADYRGPVGVILFNHSDVDFVVKVGDRIAQLIIEKIVTPDVLEVENLDSTVRGEGGFGSTGV 542 L+V KL + A+LPK +G DLS+ + ++P LVPT ++I +P T A+I PRSGLA KH + V G +D YRG +GVIL NH F V G +IAQ++I ++ +V EV++L T RG GGFGSTG+ Sbjct: 3 LKVTKLEKAAILPKYVHSDDSGLDLSAIEDLEIPPGESQLVPTGIAIELPPNTEAQIRPRSGLALKHQITVLNTPGTVDEGYRGEIGVILINHGKNSFKVTRGMKIAQMVIAPVIRVEVEEVDHLSDTTRGSGGFGSTGL 142
BLAST of DY258604 vs. ExPASy Swiss-Prot
Match: DUT_CHLT3 (Deoxyuridine 5'-triphosphate nucleotidohydrolase OS=Chloroherpeton thalassium (strain ATCC 35110 / GB-78) GN=dut PE=3 SV=1) HSP 1 Score: 117.472 bits (293), Expect = 8.704e-26 Identity = 70/142 (49.30%), Postives = 88/142 (61.97%), Query Frame = 3 Query: 129 LRVKKLSEKAVLPKRGSPLAAGYDLSSAAET--KVPARGKALVPTDLSIAIPEGTYARIAPRSGLAWKH--SMDVGAGVIDADYRGPVGVILFNHSDVDFVVKVGDRIAQLIIEKIVTPDVLEVENLDSTVRGEGGFGSTGV 542 + KKL +A LPK + AAG D+S+ + V A+ ALVPT L++ IP G A++ PRSGLA KH S+ IDAD+RG + VIL NH F VK GDRIAQ++I K+ V+EV L T RGEGGFG TGV Sbjct: 4 IHCKKLHPEARLPKYATEGAAGMDISACLDEPISVEAQSVALVPTGLALEIPPGYEAQLRPRSGLALKHLISLPNAPATIDADFRGELKVILINHGKDAFEVKHGDRIAQMVIAKVEKVAVVEVAALSETKRGEGGFGHTGV 145
BLAST of DY258604 vs. ExPASy Swiss-Prot
Match: DUT_HELHP (Deoxyuridine 5'-triphosphate nucleotidohydrolase OS=Helicobacter hepaticus GN=dut PE=3 SV=1) HSP 1 Score: 117.087 bits (292), Expect = 1.137e-25 Identity = 61/140 (43.57%), Postives = 88/140 (62.86%), Query Frame = 3 Query: 129 LRVKKLSEKAVLPKRGSPLAAGYDLSSAAETKVPARGKALVPTDLSIAIPEGTYARIAPRSGLAWKHSMDV--GAGVIDADYRGPVGVILFNHSDVDFVVKVGDRIAQLIIEKIVTPDVLEVENLDSTVRGEGGFGSTGV 542 +++KKL AV+P +P AAG+DL + ++ + AR + LV T L+ I G ++ PRSGLA + + V G ID+DYRG + VIL NHS+ DF + GDRIAQ ++ ++ EV+ L +VRGE GFGS+GV Sbjct: 7 IKIKKLHSHAVIPSYQTPQAAGFDLHAVEDSLIKARDRGLVGTGLAFEIESGFEVQVRPRSGLALHNGVSVLNTPGTIDSDYRGEIKVILINHSNEDFHIHRGDRIAQAVVSEVTQAVFTEVQELGQSVRGERGFGSSGV 146 The following BLAST results are available for this feature:
BLAST of DY258604 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 440
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Sequences
The
following sequences are available for this feature:
EST sequence >DY258604 ID=DY258604; Name=DY258604; organism=Citrus clementina; type=EST; length=793bpback to top |