DY258605
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of DY258605 vs. ExPASy Swiss-Prot
Match: SPEE_SYNJB (Spermidine synthase OS=Synechococcus sp. GN=speE PE=3 SV=1) HSP 1 Score: 71.2478 bits (173), Expect = 6.359e-12 Identity = 44/141 (31.21%), Postives = 76/141 (53.90%), Query Frame = 1 Query: 1 ADPVEGGPCYQLYTKSFYERILKPKLNDNGIFVTQAGPAG-IFTHKEVFSSIYNTIKQVFKHVVAYTAHVPSFADTWGWVMASDQPFS--INAEEIDNRIKSRINAE---LLYLNGASFLSSTTMNKAVYLSLLNETHVYT 405 +DP+E GP Y+L+T+ F+ +I + KL +G F QAGP G + H+ + I T+K VF V Y + P++ G+ +A+ P S E+ID + +++ E L +++G + L + + ++ ET VYT Sbjct: 167 SDPIESGPAYRLFTQEFFRQI-RSKLQPDGAFTIQAGPTGPVELHQH--TRIVRTLKTVFAAVQPYAIYAPTYGGPLGFALAAQDPISPRPEPEQIDQILSQQLDPERGALQFIDGITLLGLYQVPAHLRRAIAAETVVYT 304
BLAST of DY258605 vs. ExPASy Swiss-Prot
Match: SPEE_THET8 (Spermidine synthase OS=Thermus thermophilus (strain HB8 / ATCC 27634 / DSM 579) GN=speE PE=1 SV=1) HSP 1 Score: 70.4774 bits (171), Expect = 1.085e-11 Identity = 48/150 (32.00%), Postives = 79/150 (52.67%), Query Frame = 1 Query: 4 DPV-EGGPCYQLYTKSFYERILKPKLNDNGIFVTQAGPAGIFTHKEVFSSIYNTIKQVFKHVVAYTAHVPSFADTWGWVMASD--QPFSINAEEIDNRIKSRINAELLYLNGASFLSSTTMNKAVYLSLLNETHVYTEEDARFIHGHGVA 444 DPV E P LYT FY R++K LN G+ QAG + TH V ++ T+++ F++V +Y H+P F +G+++ASD P + + I+ RI+ R N L +L + + K + +L ET V T+++ ++ G A Sbjct: 161 DPVGEDNPARLLYTVEFY-RLVKAHLNPGGVMGMQAGMI-LLTHHRVHPVVHRTVREAFRYVRSYKNHIPGFFLNFGFLLASDAFDPAAFSEGVIEARIRER-NLALRHLTAPYLEAMFVLPKDLLEALEKETMVSTDQNPFYVTPEGEA 307
BLAST of DY258605 vs. ExPASy Swiss-Prot
Match: SPEE_THET2 (Spermidine synthase OS=Thermus thermophilus (strain HB27 / ATCC BAA-163 / DSM 7039) GN=speE PE=3 SV=1) HSP 1 Score: 70.4774 bits (171), Expect = 1.085e-11 Identity = 48/150 (32.00%), Postives = 79/150 (52.67%), Query Frame = 1 Query: 4 DPV-EGGPCYQLYTKSFYERILKPKLNDNGIFVTQAGPAGIFTHKEVFSSIYNTIKQVFKHVVAYTAHVPSFADTWGWVMASD--QPFSINAEEIDNRIKSRINAELLYLNGASFLSSTTMNKAVYLSLLNETHVYTEEDARFIHGHGVA 444 DPV E P LYT FY R++K LN G+ QAG + TH V ++ T+++ F++V +Y H+P F +G+++ASD P + + I+ RI+ R N L +L + + K + +L ET V T+++ ++ G A Sbjct: 161 DPVGEDNPARLLYTVEFY-RLVKAHLNPGGVMGMQAGMI-LLTHHRVHPVVHRTVREAFRYVRSYKNHIPGFFLNFGFLLASDAFDPAAFSEGVIEARIRER-NLALRHLTAPYLEAMFVLPKDLLEALEKETMVSTDQNPFYVTPEGEA 307
BLAST of DY258605 vs. ExPASy Swiss-Prot
Match: SPEE_SYNJA (Spermidine synthase OS=Synechococcus sp. (strain JA-3-3Ab) GN=speE PE=3 SV=1) HSP 1 Score: 69.707 bits (169), Expect = 1.850e-11 Identity = 43/143 (30.07%), Postives = 76/143 (53.15%), Query Frame = 1 Query: 1 ADPVEGGPCYQLYTKSFYERILKPKLNDNGIFVTQAGPAG---IFTHKEVFSSIYNTIKQVFKHVVAYTAHVPSFADTWGWVMASDQPFSI--NAEEIDNRIKSRINAE---LLYLNGASFLSSTTMNKAVYLSLLNETHVYT 405 +DPVE GP Y+L+T+ F+ ++ + KL G FV QAGP G ++ H + I +T+K VF V Y + P++ G+ +A+ P S E++D + ++ + L +++G + L + + ++ ET VYT Sbjct: 167 SDPVEAGPAYRLFTQEFFRQV-RSKLQTAGAFVIQAGPTGPVELWQH----TRIVHTLKTVFAAVQPYAIYAPTYGGPLGFALAAQDPISSRPEPEQVDQILAQHLDPDRGALRFIDGITLLGLYQVPAHLRRAIAAETTVYT 304 The following BLAST results are available for this feature:
BLAST of DY258605 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 14
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >DY258605 ID=DY258605; Name=DY258605; organism=Citrus clementina; type=EST; length=736bpback to top |