DY258607
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of DY258607 vs. ExPASy Swiss-Prot
Match: RAB1A_PIG (Ras-related protein Rab-1A OS=Sus scrofa GN=RAB1A PE=2 SV=3) HSP 1 Score: 141.739 bits (356), Expect = 7.301e-33 Identity = 70/132 (53.03%), Postives = 99/132 (75.00%), Query Frame = 2 Query: 539 DYLFKVVLIGDSAVGKSNLLARFARDEFYPNSKSTIGVEFQTQKMDINGKEVKAQIWDTAGQERFRAVTSAYYRGAVGALLVYDISRRQTFESIGRWLNELHTHSNMNVVTILVGNKSKL--KKAREGTTAK 928 DYLFK++LIGDS VGKS LL RFA D + + STIGV+F+ + ++++GK +K QIWDTAGQERFR +TS+YYRGA G ++VYD++ + +F ++ +WL E+ +++ NV +LVGNK L KK + TTAK Sbjct: 9 DYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTIKLQIWDTAGQERFRTITSSYYRGAHGIIVVYDVTDQGSFNNVKQWLQEIDRYASENVNKLLVGNKCDLTTKKVVDYTTAK 140
BLAST of DY258607 vs. ExPASy Swiss-Prot
Match: RAB4B_DANRE (Ras-related protein Rab-4B OS=Danio rerio GN=rab4b PE=2 SV=1) HSP 1 Score: 141.354 bits (355), Expect = 9.535e-33 Identity = 71/145 (48.97%), Postives = 97/145 (66.90%), Query Frame = 2 Query: 539 DYLFKVVLIGDSAVGKSNLLARFARDEFYPNSKSTIGVEFQTQKMDINGKEVKAQIWDTAGQERFRAVTSAYYRGAVGALLVYDISRRQTFESIGRWLNELHTHSNMNVVTILVGNKSKLKKAREGTTAKGRALAKAQGLFFQGT 973 D+LFK ++IG + GKS LL +F ++F +S TIGVEF ++ +++ GK VK QIWDTAGQERFR+VT +YYRGA GALLVYDI+ R+T+ ++ WL + T ++ N+V IL GNK L RE T + A+ L F T Sbjct: 6 DFLFKFLVIGSAGTGKSCLLHQFIENKFKQDSNHTIGVEFGSRVVNVGGKTVKLQIWDTAGQERFRSVTRSYYRGAAGALLVYDITSRETYNALTNWLTDARTLASPNIVIILCGNKKDLDADREVTFLEASRFAQENELMFLET 150
BLAST of DY258607 vs. ExPASy Swiss-Prot
Match: RAB1B_PIG (Ras-related protein Rab-1B OS=Sus scrofa GN=RAB1B PE=2 SV=1) HSP 1 Score: 141.354 bits (355), Expect = 9.535e-33 Identity = 69/132 (52.27%), Postives = 100/132 (75.76%), Query Frame = 2 Query: 539 DYLFKVVLIGDSAVGKSNLLARFARDEFYPNSKSTIGVEFQTQKMDINGKEVKAQIWDTAGQERFRAVTSAYYRGAVGALLVYDISRRQTFESIGRWLNELHTHSNMNVVTILVGNKSKL--KKAREGTTAK 928 DYLFK++LIGDS VGKS LL RFA D + + STIGV+F+ + ++++GK +K QIWDTAGQER R +TS+YYRGA G ++VYD++ ++++ ++ +WL E+ +++ NV +LVGNKS L KK + TTAK Sbjct: 6 DYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTIKLQIWDTAGQERGRTITSSYYRGAHGIIVVYDVTDQESYANVKQWLQEIDRYASENVNKLLVGNKSDLTTKKVVDNTTAK 137
BLAST of DY258607 vs. ExPASy Swiss-Prot
Match: YPTV1_VOLCA (GTP-binding protein yptV1 OS=Volvox carteri GN=YPTV1 PE=3 SV=1) HSP 1 Score: 140.969 bits (354), Expect = 1.245e-32 Identity = 70/145 (48.28%), Postives = 102/145 (70.34%), Query Frame = 2 Query: 539 DYLFKVVLIGDSAVGKSNLLARFARDEFYPNSKSTIGVEFQTQKMDINGKEVKAQIWDTAGQERFRAVTSAYYRGAVGALLVYDISRRQTFESIGRWLNELHTHSNMNVVTILVGNKSKLKKAREGTTAKGRALAKAQGLFFQGT 973 DYLFK++LIGDS VGKS LL RFA D + + STIGV+F+ + ++++GK +K QIWDTAGQERFR +TS+YYRGA G ++VYD++ +++F ++ +WL E+ +++ NV +LVGNKS L + +A A G+ F T Sbjct: 6 DYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTVELDGKVIKLQIWDTAGQERFRTITSSYYRGAHGIIVVYDVTDQESFNNVKQWLAEIDRYASENVNKLLVGNKSDLTGKKVVDYQAAKAFADEIGIPFLET 150
BLAST of DY258607 vs. ExPASy Swiss-Prot
Match: RAB3B_MOUSE (Ras-related protein Rab-3B OS=Mus musculus GN=Rab3b PE=1 SV=1) HSP 1 Score: 140.969 bits (354), Expect = 1.245e-32 Identity = 68/154 (44.16%), Postives = 103/154 (66.88%), Query Frame = 2 Query: 503 KMAFYSEEDRAEDYLFKVVLIGDSAVGKSNLLARFARDEFYPNSKSTIGVEFQTQKMDINGKEVKAQIWDTAGQERFRAVTSAYYRGAVGALLVYDISRRQTFESIGRWLNELHTHSNMNVVTILVGNKSKLKKAREGTTAKGRALAKAQGLFF 964 K D+ DY+FK+++IG+S+VGK++ L R+A D F P ST+G++F+ + + + K VK QIWDTAGQER+R +T+AYYRGA+G +L+YDI+ ++F ++ W ++ T+S N ILVGNK +++ R T KGR LA+ G F Sbjct: 8 KTGIKDASDQNFDYMFKLLIIGNSSVGKTSFLFRYADDTFTPAFVSTVGIDFKVKTVYRHEKRVKLQIWDTAGQERYRTITTAYYRGAMGFILMYDITNEESFNAVQDWATQIKTYSWDNAQVILVGNKCDMEEERVVPTEKGRLLAEQLGFDF 161
BLAST of DY258607 vs. ExPASy Swiss-Prot
Match: RAB13_MOUSE (Ras-related protein Rab-13 OS=Mus musculus GN=Rab13 PE=2 SV=1) HSP 1 Score: 140.969 bits (354), Expect = 1.245e-32 Identity = 65/145 (44.83%), Postives = 100/145 (68.97%), Query Frame = 2 Query: 530 RAEDYLFKVVLIGDSAVGKSNLLARFARDEFYPNSKSTIGVEFQTQKMDINGKEVKAQIWDTAGQERFRAVTSAYYRGAVGALLVYDISRRQTFESIGRWLNELHTHSNMNVVTILVGNKSKLKKAREGTTAKGRALAKAQGLFF 964 +A D+LFK++LIGDS VGK+ L+ RFA D F STIG++F+ + +DI GK +K Q+WDTAGQERF+ +T+AYYRGA+G +LVYDI+ ++FE+I W+ + +++ V +L+GNK ++ R+ + LA+ + F Sbjct: 3 KAYDHLFKLLLIGDSGVGKTCLIIRFAEDNFNSTYISTIGIDFKIRTVDIEGKRIKLQVWDTAGQERFKTITTAYYRGAMGIILVYDITDEKSFENIQNWMKSIKENASAGVERLLLGNKCDMEAKRQVQREQAEKLAREHRIRF 147
BLAST of DY258607 vs. ExPASy Swiss-Prot
Match: RAB13_MESAU (Ras-related protein Rab-13 OS=Mesocricetus auratus GN=RAB13 PE=2 SV=1) HSP 1 Score: 140.969 bits (354), Expect = 1.245e-32 Identity = 65/145 (44.83%), Postives = 101/145 (69.66%), Query Frame = 2 Query: 530 RAEDYLFKVVLIGDSAVGKSNLLARFARDEFYPNSKSTIGVEFQTQKMDINGKEVKAQIWDTAGQERFRAVTSAYYRGAVGALLVYDISRRQTFESIGRWLNELHTHSNMNVVTILVGNKSKLKKAREGTTAKGRALAKAQGLFF 964 +A D+LFK++LIGDS VGK+ L+ RFA D F STIG++F+ + ++I GK +K Q+WDTAGQERF+ +T+AYYRGA+G +LVYDI+ ++FE+I W+ + +++ V +L+GNK ++ R+ + LA+ G+ F Sbjct: 3 KAYDHLFKLLLIGDSGVGKTCLIIRFAEDNFNNTYISTIGIDFKIRTVEIEGKRIKLQVWDTAGQERFKTITTAYYRGAMGIILVYDITDEKSFENIQNWMKSIKENASAGVERLLLGNKCDMEAKRKVLKEQADKLAREHGIRF 147
BLAST of DY258607 vs. ExPASy Swiss-Prot
Match: RAB3B_MESAU (Ras-related protein Rab-3B OS=Mesocricetus auratus GN=RAB3B PE=2 SV=1) HSP 1 Score: 140.584 bits (353), Expect = 1.626e-32 Identity = 67/146 (45.89%), Postives = 102/146 (69.86%), Query Frame = 2 Query: 527 DRAEDYLFKVVLIGDSAVGKSNLLARFARDEFYPNSKSTIGVEFQTQKMDINGKEVKAQIWDTAGQERFRAVTSAYYRGAVGALLVYDISRRQTFESIGRWLNELHTHSNMNVVTILVGNKSKLKKAREGTTAKGRALAKAQGLFF 964 D+ DY+FK+++IG+S+VGK++ L R+A D F P ST+G++F+ + + + K VK QIWDTAGQER+R +T+AYYRGA+G +L+YDI+ ++F ++ W ++ T+S N ILVGNK +++ R T KGR LA+ G F Sbjct: 16 DQNFDYMFKLLIIGNSSVGKTSFLFRYADDTFTPAFVSTVGIDFKVKTVYRHEKRVKLQIWDTAGQERYRTITTAYYRGAMGFILMYDITNEESFNAVQDWATQIKTYSWDNAQVILVGNKCDMEEERVVPTEKGRLLAEQLGFDF 161
BLAST of DY258607 vs. ExPASy Swiss-Prot
Match: RAB3B_BOVIN (Ras-related protein Rab-3B OS=Bos taurus GN=RAB3B PE=2 SV=1) HSP 1 Score: 140.584 bits (353), Expect = 1.626e-32 Identity = 67/146 (45.89%), Postives = 102/146 (69.86%), Query Frame = 2 Query: 527 DRAEDYLFKVVLIGDSAVGKSNLLARFARDEFYPNSKSTIGVEFQTQKMDINGKEVKAQIWDTAGQERFRAVTSAYYRGAVGALLVYDISRRQTFESIGRWLNELHTHSNMNVVTILVGNKSKLKKAREGTTAKGRALAKAQGLFF 964 D+ DY+FK+++IG+S+VGK++ L R+A D F P ST+G++F+ + + + K VK QIWDTAGQER+R +T+AYYRGA+G +L+YDI+ ++F ++ W ++ T+S N ILVGNK +++ R T KGR LA+ G F Sbjct: 16 DQNFDYMFKLLIIGNSSVGKTSFLFRYADDTFTPAFVSTVGIDFKVKTVYRHEKRVKLQIWDTAGQERYRTITTAYYRGAMGFILMYDITNEESFNAVQDWATQIKTYSWDNAQVILVGNKCDMEEERVVPTEKGRLLAEQLGFDF 161
BLAST of DY258607 vs. ExPASy Swiss-Prot
Match: RAB19_MOUSE (Ras-related protein Rab-19 OS=Mus musculus GN=Rab19 PE=2 SV=3) HSP 1 Score: 140.584 bits (353), Expect = 1.626e-32 Identity = 66/144 (45.83%), Postives = 97/144 (67.36%), Query Frame = 2 Query: 527 DRAEDYLFKVVLIGDSAVGKSNLLARFARDEFYPNSKSTIGVEFQTQKMDINGKEVKAQIWDTAGQERFRAVTSAYYRGAVGALLVYDISRRQTFESIGRWLNELHTHSNMNVVTILVGNKSKLKKAREGTTAKGRALAKAQGL 958 D DYLFKV+LIGDS VGK+ ++ F + + ++TIGV+F + ++I+GK+VK Q+WDTAGQERFR +T +YYR A A++ YD++RR TFES+ W++E+ + N+V +L+GNKS L + R LA+ GL Sbjct: 11 DENVDYLFKVILIGDSNVGKTCVVQHFKSGVYSESQQNTIGVDFTVRSLEIDGKKVKMQVWDTAGQERFRTITQSYYRSAHAAIIAYDLTRRSTFESVPHWIHEIEKYGAANLVIMLIGNKSDLWEKRHVLFEDACTLAEKHGL 154 The following BLAST results are available for this feature:
BLAST of DY258607 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >DY258607 ID=DY258607; Name=DY258607; organism=Citrus clementina; type=EST; length=1124bpback to top |