DY258607

Overview
NameDY258607
Unique NameDY258607
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length1124
Libraries
Library NameType
AbsDev1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of DY258607 vs. ExPASy Swiss-Prot
Match: RAP2B_MOUSE (Ras-related protein Rap-2b OS=Mus musculus GN=Rap2b PE=1 SV=1)

HSP 1 Score: 71.2478 bits (173), Expect = 1.212e-11
Identity = 45/143 (31.47%), Postives = 74/143 (51.75%), Query Frame = 2
Query:  548 FKVVLIGDSAVGKSNLLARFARDEFYPNSKSTIGVEFQTQKMDINGKEVKAQIWDTAGQERFRAVTSAYYRGAVGALLVYDISRRQTFESIGRWLNE-LHTHSNMNVVTILVGNKSKLKKAREGTTAKGRALAKAQGLFFQGT 973
            +KVV++G   VGKS L  +F    F      TI  +F  ++++++      +I DTAG E+F ++   Y +   G +LVY +  +Q+F+ I    ++ +       V  ILVGNK  L+  RE +  +G+ALA+     F  T
Sbjct:    4 YKVVVLGSGGVGKSALTVQFVTGSFIEKYDPTIE-DFYRKEIEVDSSPSVLEILDTAGTEQFASMRDLYIKNGQGFILVYSLVNQQSFQDIKPMRDQIIRVKRYERVPMILVGNKVDLEGEREVSYGEGKALAEEWSCPFMET 145          
BLAST of DY258607 vs. ExPASy Swiss-Prot
Match: RAP2B_HUMAN (Ras-related protein Rap-2b OS=Homo sapiens GN=RAP2B PE=1 SV=1)

HSP 1 Score: 71.2478 bits (173), Expect = 1.212e-11
Identity = 45/143 (31.47%), Postives = 74/143 (51.75%), Query Frame = 2
Query:  548 FKVVLIGDSAVGKSNLLARFARDEFYPNSKSTIGVEFQTQKMDINGKEVKAQIWDTAGQERFRAVTSAYYRGAVGALLVYDISRRQTFESIGRWLNE-LHTHSNMNVVTILVGNKSKLKKAREGTTAKGRALAKAQGLFFQGT 973
            +KVV++G   VGKS L  +F    F      TI  +F  ++++++      +I DTAG E+F ++   Y +   G +LVY +  +Q+F+ I    ++ +       V  ILVGNK  L+  RE +  +G+ALA+     F  T
Sbjct:    4 YKVVVLGSGGVGKSALTVQFVTGSFIEKYDPTIE-DFYRKEIEVDSSPSVLEILDTAGTEQFASMRDLYIKNGQGFILVYSLVNQQSFQDIKPMRDQIIRVKRYERVPMILVGNKVDLEGEREVSYGEGKALAEEWSCPFMET 145          
BLAST of DY258607 vs. ExPASy Swiss-Prot
Match: RAP2A_PIG (Ras-related protein Rap-2a OS=Sus scrofa GN=RAP2A PE=2 SV=1)

HSP 1 Score: 71.2478 bits (173), Expect = 1.212e-11
Identity = 45/143 (31.47%), Postives = 74/143 (51.75%), Query Frame = 2
Query:  548 FKVVLIGDSAVGKSNLLARFARDEFYPNSKSTIGVEFQTQKMDINGKEVKAQIWDTAGQERFRAVTSAYYRGAVGALLVYDISRRQTFESIGRWLNE-LHTHSNMNVVTILVGNKSKLKKAREGTTAKGRALAKAQGLFFQGT 973
            +KVV++G   VGKS L  +F    F      TI  +F  ++++++      +I DTAG E+F ++   Y +   G +LVY +  +Q+F+ I    ++ +       V  ILVGNK  L+  RE +  +G+ALA+     F  T
Sbjct:    4 YKVVVLGSGGVGKSALTVQFVTGSFIEKYDPTIE-DFYRKEIEVDSSPSVLEILDTAGTEQFASMRDLYIKNGQGFILVYSLVNQQSFQDIKPMRDQIIRVKRYERVPMILVGNKVDLEGEREVSYGEGKALAEEWSCPFMET 145          
BLAST of DY258607 vs. ExPASy Swiss-Prot
Match: RAC2_LOTJA (Rac-like GTP-binding protein RAC2 OS=Lotus japonicus GN=RAC2 PE=2 SV=1)

HSP 1 Score: 71.2478 bits (173), Expect = 1.212e-11
Identity = 49/146 (33.56%), Postives = 74/146 (50.68%), Query Frame = 2
Query:  551 KVVLIGDSAVGKSNLLARFARDEFYPNSKSTIGVEFQTQKMDINGKEVKAQIWDTAGQERFRAVTSAYYRGAVGALLVYDISRRQTFESIG-RWLNELHTHSNMNVVTILVGNKSKLKKAREG----------TTAKGRALAKAQG 955
            K V +GD AVGK+ +L  +  + F  +   T+   F    + ++G  V   +WDTAGQE +  +    YRGA   LL + +  R ++E+I  +W+ EL  H    V  +LVG K  L++ R+           TTA+G  L KA G
Sbjct:    8 KCVTVGDGAVGKTCMLISYTSNTFPTDYVPTVFDNFSANVV-VDGSTVNLGLWDTAGQEDYNRLRPLSYRGADVFLLAFSLLSRASYENISKKWIPELR-HYAPTVPIVLVGTKLDLREDRQYLIDHPGATPITTAQGEELKKAIG 151          
BLAST of DY258607 vs. ExPASy Swiss-Prot
Match: RIT2_MOUSE (GTP-binding protein Rit2 OS=Mus musculus GN=Rit2 PE=1 SV=1)

HSP 1 Score: 70.4774 bits (171), Expect = 2.067e-11
Identity = 42/134 (31.34%), Postives = 71/134 (52.99%), Query Frame = 2
Query:  548 FKVVLIGDSAVGKSNLLARFARDEFYPNSKSTIGVEFQTQKMDINGKEVKAQIWDTAGQERFRAVTSAYYRGAVGALLVYDISRRQTFESIGRWLNEL-HTHSNMNVVTILVGNKSKLKKAREGTTAKGRALAK 946
            +KVV++G   VGKS +  +F   +F      TI   ++TQ + I+ +     I DTAGQ  F A+   Y RG  G ++ Y ++ RQ+F+   ++   +        +  +LVGNK  L++ R+ +T +G  LA+
Sbjct:   21 YKVVMLGAGGVGKSAVTMQFISHQFPDYHDPTIEDAYKTQ-VRIDNEPAYLDILDTAGQAEFTAMREQYMRGGEGFIICYSVTDRQSFQEAAKFKELIFQVRHTYEIPLVLVGNKIDLEQFRQVSTEEGMNLAR 153          
BLAST of DY258607 vs. ExPASy Swiss-Prot
Match: RAP1_PHYPO (Ras-related protein Rap-1 OS=Physarum polycephalum GN=RAP1 PE=2 SV=1)

HSP 1 Score: 70.4774 bits (171), Expect = 2.067e-11
Identity = 45/137 (32.85%), Postives = 71/137 (51.82%), Query Frame = 2
Query:  548 FKVVLIGDSAVGKSNLLARFARDEFYPNSKSTIGVEFQTQKMDINGKEVKAQIWDTAGQERFRAVTSAYYRGAVGALLVYDISRRQTFESIGRWLNE-LHTHSNMNVVTILVGNKSKLKKAREGTTAKGRALAKAQG 955
            FK+V++G   VGKS L  +F +  F      TI   ++ Q ++++G++   +I DTAG E+F A+   Y +   G +LVY I    TF  +     + L      +V  +LVGNK  L + R  +T +G  LA+  G
Sbjct:    6 FKIVVLGSGGVGKSALTVQFVQGIFVEKYDPTIEDSYRKQ-VEVDGQQCMLEILDTAGTEQFTAMRDLYMKNGQGFVLVYSIIAMSTFNDLPDLREQILRVKDCDDVPMVLVGNKCDLAEQRVISTEQGDELARKFG 141          
BLAST of DY258607 vs. ExPASy Swiss-Prot
Match: RABM_DICDI (Ras-related protein RabM OS=Dictyostelium discoideum GN=rabM PE=3 SV=2)

HSP 1 Score: 70.4774 bits (171), Expect = 2.067e-11
Identity = 33/118 (27.97%), Postives = 64/118 (54.24%), Query Frame = 2
Query:  551 KVVLIGDSAVGKSNLLARFARDEFYPNSKSTIGVEFQTQKMDINGKEVKAQIWDTAGQERFRAVTSAYYRGAVGALLVYDISRRQTFESIGRWLNELHTHSNMNVVTILVGNKSKLKK 904
            K++ +GDS VGK+++   F   ++  N + T+   F ++ + I  + V   +WDT  QERF  ++  YYR +    L +DI   ++F+++ +W++E        V  +L+G K  + +
Sbjct:    7 KIITLGDSYVGKTSVFNNFVTGKYEIN-ECTVSPSFYSKTLTIENEPVILNVWDTCSQERFNGLSPIYYRWSNCYTLCFDIHNEKSFKNLDKWMDEARKFCIGKVPFVLIGTKKDIPR 123          
BLAST of DY258607 vs. ExPASy Swiss-Prot
Match: RAS1_CANAL (Ras-like protein 1 OS=Candida albicans GN=RAS1 PE=3 SV=1)

HSP 1 Score: 70.0922 bits (170), Expect = 2.700e-11
Identity = 43/135 (31.85%), Postives = 71/135 (52.59%), Query Frame = 2
Query:  548 FKVVLIGDSAVGKSNLLARFARDEFYPNSKSTIGVEFQTQKMDINGKEVKAQIWDTAGQERFRAVTSAYYRGAVGALLVYDISRRQTFESIGRWLNE-LHTHSNMNVVTILVGNKSKLKKAREGTTAKGRALAKA 949
            +K+V++G   VGKS L  +  +  F      TI   ++ Q   I+ ++V   + DTAGQE + A+   Y R   G LLVY I+   +F+ +  + ++ L    + NV  ++VGNK  L+  R+ +   G ALA +
Sbjct:    5 YKLVVVGGGGVGKSALTIQLIQSHFVDEYDPTIEDSYRKQ-CTIDDQQVLLDVLDTAGQEEYSAMREQYMRTGEGFLLVYSINSLNSFQELNSFYDQILRVKDSDNVPVLVVGNKCDLEMERQVSYEDGLALANS 138          
BLAST of DY258607 vs. ExPASy Swiss-Prot
Match: RRAS_HUMAN (Ras-related protein R-Ras OS=Homo sapiens GN=RRAS PE=1 SV=1)

HSP 1 Score: 69.707 bits (169), Expect = 3.526e-11
Identity = 42/122 (34.43%), Postives = 65/122 (53.28%), Query Frame = 2
Query:  551 KVVLIGDSAVGKSNLLARFARDEFYPNSKSTIGVEFQTQKMDINGKEVKAQIWDTAGQERFRAVTSAYYRGAVGALLVYDISRRQTFESIGRWLNE-LHTHSNMNVVTILVGNKSKLKKARE 913
            K+V++G   VGKS L  +F +  F  +   TI   + T+   ++G   +  I DTAGQE F A+   Y R   G LLV+ I+ RQ+F  +G+   + L      +   +LVGNK+ L+  R+
Sbjct:   31 KLVVVGGGGVGKSALTIQFIQSYFVSDYDPTIEDSY-TKICSVDGIPARLDILDTAGQEEFGAMREQYMRAGHGFLLVFAINDRQSFNEVGKLFTQILRVKDRDDFPVVLVGNKADLESQRQ 151          
BLAST of DY258607 vs. ExPASy Swiss-Prot
Match: RASD_DICDI (Ras-like protein rasD OS=Dictyostelium discoideum GN=rasD PE=2 SV=2)

HSP 1 Score: 69.707 bits (169), Expect = 3.526e-11
Identity = 44/134 (32.84%), Postives = 69/134 (51.49%), Query Frame = 2
Query:  548 FKVVLIGDSAVGKSNLLARFARDEFYPNSKSTIGVEFQTQKMDINGKEVKAQIWDTAGQERFRAVTSAYYRGAVGALLVYDISRRQTFESIGRWLNE-LHTHSNMNVVTILVGNKSKLKKAREGTTAKGRALAK 946
            +K+V++G   VGKS L  +  ++ F      TI   ++ Q + I+ +     I DTAGQE + A+   Y R   G L VY I+ R +++ I  +  + L       V  ILVGNK+ L   R+ +  +G+ LAK
Sbjct:    4 YKLVIVGGGGVGKSALTIQLIQNHFIDEYDPTIEDSYRKQ-VSIDDETCLLDILDTAGQEEYSAMRDQYMRTGQGFLCVYSITSRSSYDEIASFREQILRVKDKDRVPLILVGNKADLDHERQVSVNEGQELAK 136          
The following BLAST results are available for this feature:
BLAST of DY258607 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
RAP2B_MOUSE1.212e-1131.47Ras-related protein Rap-2b OS=Mus musculus GN=Rap2... [more]
RAP2B_HUMAN1.212e-1131.47Ras-related protein Rap-2b OS=Homo sapiens GN=RAP2... [more]
RAP2A_PIG1.212e-1131.47Ras-related protein Rap-2a OS=Sus scrofa GN=RAP2A ... [more]
RAC2_LOTJA1.212e-1133.56Rac-like GTP-binding protein RAC2 OS=Lotus japonic... [more]
RIT2_MOUSE2.067e-1131.34GTP-binding protein Rit2 OS=Mus musculus GN=Rit2 P... [more]
RAP1_PHYPO2.067e-1132.85Ras-related protein Rap-1 OS=Physarum polycephalum... [more]
RABM_DICDI2.067e-1127.97Ras-related protein RabM OS=Dictyostelium discoide... [more]
RAS1_CANAL2.700e-1131.85Ras-like protein 1 OS=Candida albicans GN=RAS1 PE=... [more]
RRAS_HUMAN3.526e-1134.43Ras-related protein R-Ras OS=Homo sapiens GN=RRAS ... [more]
RASD_DICDI3.526e-1132.84Ras-like protein rasD OS=Dictyostelium discoideum ... [more]

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Properties
Property NameValue
Genbank descriptionKN0AAI2CD02FM1 AbsDev1 Citrus clementina cDNA 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DY258607 ID=DY258607; Name=DY258607; organism=Citrus clementina; type=EST; length=1124bp
GAAAACCGCGTCATTGTATTTGTTCTCTCCAGAGTCCAGAACCAACCCAT
TATAAAATCACTTCATTTTCATCATCAGATCCATTTCTACTGTTCTCATT
TCGTCACAAATCTGAGATACGAGGGACAGAGAGCCACCTCGGCGTCATTA
ACCGGCTGACAAAGGAGCGTATCAACTGGGAGCGAGAGCTGAAGTTGGGT
CTGTAGTGGTAGAAGGGAAAGAAGTTAGTTTAGTAGAGGTTTTCAGTTCC
TGATGTTGCTTGAAGCAGCGGGAACCTTAGATCCTGTGTCGCTTTGGAAG
GCAAGATTGGAGTTTGACCATATTGTCCTGATAGATTTGCACACGAGTGT
AAGGAAGCATCGGGTGGGGTAGAAGTTACTGGTTTTGATTGTACCGCTCA
ATACTACATTCAGAAGAAAGTTGGTCCCTGAAAAGATCTACAACCCAGAA
GTCTATTTGTTTGCCCATATGGATCAATAGTGTAAGAATTCTGTGAAAGT
AGAAAATGGCTTTTTATTCTGAGGAGGACAGAGCTGAGGATTATCTTTTC
AAGGTTGTTCTAATTGGTGATTCAGCTGTTGGGAAATCAAATTTGCTCGC
TAGATTTGCAAGAGATGAGTTCTACCCGAATTCAAAATCGACCATCGGAG
TGGAATTCCAAACCCAAAAGATGGATATCAATGGAAAGGAAGTTAAGGCA
CAGATCTGGGACACAGCAGGTCAGGAACGGTTCAGGGCTGTTACATCTGC
ATACTACAGGGGTGCAGTTGGAGCTCTCTTGGTCTATGACATTAGTAGAC
GACAGACATTTGAAAGCATTGGCAGATGGCTTAATGAACTTCACACTCAC
TCAAATATGAATGTAGTAACCATACTTGTGGGCAACAAGTCAAAACTCAA
AAAAGCGAGGGAAGGAACTACTGCCAAAGGCAGGGCCTTGGCCAAAGCCC
AGGGTTTATTTTTCCAGGGAACTTTCCCTTCTTGATTTCCCCAAATGGAA
CTGGTGCCTTTCAAAAGGTCCTTCCCCAAAATTTAAAAATAAACTAGCCC
GAAAAGTTTTAAAATCTCTAAAACTTAAACCCAAAAGATTCTCCCCCTTT
TCCCCGGGGAAAAAAAATATTTTT
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