DY258638
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of DY258638 vs. ExPASy Swiss-Prot
Match: CLPP_LACBA (ATP-dependent Clp protease proteolytic subunit OS=Lactobacillus brevis (strain ATCC 367 / JCM 1170) GN=clpP PE=3 SV=1) HSP 1 Score: 146.362 bits (368), Expect = 3.057e-34 Identity = 81/168 (48.21%), Postives = 113/168 (67.26%), Query Frame = 1 Query: 436 DTTNMLLRQRIIFLGSQVDDLTADFIISQLLFLDAEDSKKDIRLFINSPGGSVTAGMGIYDAMKLCKADVSTICLGLAASMGAFLLAAGSKGKRYCMPNARVMIHQPLGTAGGKATDMSIRIREMSYPRLS*TDII*SSRKAGQQNE---LDTDRDNFWDAWEARESG 930 D + LL+ RII L ++D A+ II+QLLFLDA+DS KDI L+INSPGG V++G+ IYD M ++DV TI LG+AASM + L ++G+KGKR+ +P+A+VMIHQP G A G+ T++ I RE+ R I+ + +GQ E DT+RDN+ A EA + G Sbjct: 19 DIYSRLLKDRIIMLSGPIEDDMANAIIAQLLFLDAQDSTKDISLYINSPGGVVSSGLAIYDTMNFIQSDVQTITLGMAASMASVLASSGTKGKRFALPHAQVMIHQPSGGAQGQQTEIEIAAREILKTRELINKIL--AENSGQPIERLNQDTERDNYLSAQEAVDYG 184
BLAST of DY258638 vs. ExPASy Swiss-Prot
Match: CLPP_AZOBR (ATP-dependent Clp protease proteolytic subunit OS=Azospirillum brasilense GN=clpP PE=3 SV=1) HSP 1 Score: 146.362 bits (368), Expect = 3.057e-34 Identity = 83/170 (48.82%), Postives = 112/170 (65.88%), Query Frame = 1 Query: 436 DTTNMLLRQRIIFLGSQVDDLTADFIISQLLFLDAEDSKKDIRLFINSPGGSVTAGMGIYDAMKLCKADVSTICLGLAASMGAFLLAAGSKGKRYCMPNARVMIHQPLGTAGGKATDMSIRIREMSYPRLS*TDII*SSRKAGQQNELDT-----DRDNFWDAWEARESG 930 D + LL++RIIFL V+D A I SQLLFL++E+ KDI L+INSPGG V+AG+ IYD M+ + VST+C+G AASMG+ LLAAG+ GKR+ +PN+R+MIHQP G A G+A+D+ I+ +E+ R DI + GQ LDT +RD F EA+ G Sbjct: 27 DIYSRLLKERIIFLIGGVNDAVASLICSQLLFLESENPSKDIALYINSPGGYVSAGLAIYDTMQYIRPQVSTVCMGQAASMGSLLLAAGAPGKRFSLPNSRIMIHQPSGGAQGQASDIEIQAQEILKLRSRLNDIY--VKHTGQ--SLDTIEAXMERDKFMSPEEAKAFG 192
BLAST of DY258638 vs. ExPASy Swiss-Prot
Match: CLPP2_RHIL3 (ATP-dependent Clp protease proteolytic subunit 2 OS=Rhizobium leguminosarum bv. viciae (strain 3841) GN=clpP2 PE=3 SV=1) HSP 1 Score: 146.362 bits (368), Expect = 3.057e-34 Identity = 80/177 (45.20%), Postives = 115/177 (64.97%), Query Frame = 1 Query: 436 DTTNMLLRQRIIFLGSQVDDLTADFIISQLLFLDAEDSKKDIRLFINSPGGSVTAGMGIYDAMKLCKADVSTICLGLAASMGAFLLAAGSKGKRYCMPNARVMIHQPLGTAGGKATDMSIRIREMSYPRLS*TDI-I*SSRKAGQQNELDTDRDNFWDAWEARESGWGMASFMRASR 963 D + LL++RIIFL V+D A + +QLLFL+AE+ KK+I L+INSPGG VTAGM IYD M+ K VST+C+G AASMG+ LLAAG K R+ PN+R+M+HQP G G+A+D+ R++ + ++ + + + ++ E DRD+F DA EA+ WG+ + SR Sbjct: 19 DIYSRLLKERIIFLTGAVEDHMATLVCAQLLFLEAENPKKEIALYINSPGGVVTAGMAIYDTMQFIKPAVSTLCIGQAASMGSLLLAAGHKDMRFATPNSRIMVHQPSGGFQGQASDIERHARDILKMKRRLNEVYVKHTGRTYEEVEKTLDRDHFMDADEAQ--SWGVIDKVLTSR 193
BLAST of DY258638 vs. ExPASy Swiss-Prot
Match: CLPP_WOLTR (ATP-dependent Clp protease proteolytic subunit OS=Wolbachia sp. subsp. Brugia malayi (strain TRS) GN=clpP PE=3 SV=1) HSP 1 Score: 145.976 bits (367), Expect = 3.993e-34 Identity = 82/176 (46.59%), Postives = 110/176 (62.50%), Query Frame = 1 Query: 436 DTTNMLLRQRIIFLGSQVDDLTADFIISQLLFLDAEDSKKDIRLFINSPGGSVTAGMGIYDAMKLCKADVSTICLGLAASMGAFLLAAGSKGKRYCMPNARVMIHQPLGTAGGKATDMSIRIREMSYPRLS*TDII*SSRKAGQQNELDT-----------DRDNFWDAWEARESG 930 D + L+++RIIF+ V+D A I++QLLFL++E+ KDI ++INSPGG VTAG+ IYD M+ K DVST+C+G AASMG+ LLAAG++GKRY +P++R+MIHQP G G+ATD+ I E I+ RK Q E T +RD F D EAR G Sbjct: 19 DIYSRLVKERIIFVTGPVEDNMASVIVAQLLFLESENPDKDIYMYINSPGGVVTAGLSIYDTMQYIKPDVSTLCIGQAASMGSLLLAAGTEGKRYSLPHSRIMIHQPSGGYQGQATDIEIHANE----------ILRVKRKLNQIYEKHTGNSLKKIEGMMERDKFMDPEEARRIG 184
BLAST of DY258638 vs. ExPASy Swiss-Prot
Match: CLPP2_CORJK (ATP-dependent Clp protease proteolytic subunit 2 OS=Corynebacterium jeikeium (strain K411) GN=clpP2 PE=3 SV=1) HSP 1 Score: 145.976 bits (367), Expect = 3.993e-34 Identity = 81/170 (47.65%), Postives = 112/170 (65.88%), Query Frame = 1 Query: 427 EELDTTNMLLRQRIIFLGSQVDDLTADFIISQLLFLDAEDSKKDIRLFINSPGGSVTAGMGIYDAMKLCKADVSTICLGLAASMGAFLLAAGSKGKRYCMPNARVMIHQP-LGTAGGKATDMSIRIREMSYPR-LS*TDII*SSRKAGQQNELDTDRDNFWDAWEARESG 930 +E + N L +RIIFLG+QVDD +A+ I++QLL L+ D +DI ++INSPGGS T+ M IYD M+ + DV T+CLG AAS A LLAAG+ GKR +PNARV+IHQP G G+ +D+ I+ +E+ R L + + K+ +Q +DTDRD A EA+E G Sbjct: 25 KESNPYNKLFEERIIFLGTQVDDASANDIMAQLLVLEGLDPDRDITMYINSPGGSFTSLMAIYDTMQYVRPDVQTVCLGQAASAAAVLLAAGTPGKRAALPNARVLIHQPATGGVQGQVSDLEIQAKEIERMRKLMEETLARHTGKSAEQVRIDTDRDKILTAEEAKEYG 194
BLAST of DY258638 vs. ExPASy Swiss-Prot
Match: CLPP_RHORT (ATP-dependent Clp protease proteolytic subunit OS=Rhodospirillum rubrum (strain ATCC 11170 / NCIB 8255) GN=clpP PE=3 SV=1) HSP 1 Score: 145.591 bits (366), Expect = 5.214e-34 Identity = 81/166 (48.80%), Postives = 107/166 (64.46%), Query Frame = 1 Query: 436 DTTNMLLRQRIIFLGSQVDDLTADFIISQLLFLDAEDSKKDIRLFINSPGGSVTAGMGIYDAMKLCKADVSTICLGLAASMGAFLLAAGSKGKRYCMPNARVMIHQPLGTAGGKATDMSIRIREMSYPRLS*TDI-I*SSRKAGQQNELDTDRDNFWDAWEARESG 930 D + LL++RIIFL QV D A I +QLLFL++E+ KDI +INSPGG VT+GM IYD M+ ++ VST+C+G AASMG+ LL AG GKRY PNAR+MIHQP G G+A D+ I+ RE+ R I + + + + E DRDN+ A E+R G Sbjct: 30 DIYSRLLKERIIFLTGQVHDGVASLICAQLLFLESENPSKDISFYINSPGGVVTSGMAIYDTMQYIRSPVSTVCIGQAASMGSLLLCAGEAGKRYATPNARIMIHQPSGGFQGQAADIEIQAREILALRERLNRIYVKHTGQPLETIERAMDRDNYMTAEESRAFG 195
BLAST of DY258638 vs. ExPASy Swiss-Prot
Match: CLPP_METEP (ATP-dependent Clp protease proteolytic subunit OS=Methylobacterium extorquens (strain PA1) GN=clpP PE=3 SV=1) HSP 1 Score: 145.591 bits (366), Expect = 5.214e-34 Identity = 79/168 (47.02%), Postives = 110/168 (65.48%), Query Frame = 1 Query: 436 DTTNMLLRQRIIFLGSQVDDLTADFIISQLLFLDAEDSKKDIRLFINSPGGSVTAGMGIYDAMKLCKADVSTICLGLAASMGAFLLAAGSKGKRYCMPNARVMIHQPLGTAGGKATDMSIRIREMSYPRLS*TDII*SSRKAGQQNEL---DTDRDNFWDAWEARESG 930 D + LLR+RIIFL V+D A I++QLLFL+AE+ KK+I +INSPGG VT+G+ IYD M+ + V+T+C+G AASMG+ LLAAG G R+ +PNAR+M+HQP G G+ATD+ I RE+ + +I + G++ E +RDNF A A+E G Sbjct: 28 DIYSRLLRERIIFLTGPVEDQGASLIVAQLLFLEAENPKKEISFYINSPGGVVTSGLSIYDTMQFIRCPVTTLCVGQAASMGSLLLAAGEAGHRFALPNARIMVHQPSGGFQGQATDILIHAREIEALKKRLNEIY--VKHTGREYETIHQALERDNFMTADAAKEFG 193
BLAST of DY258638 vs. ExPASy Swiss-Prot
Match: CLPP_METC4 (ATP-dependent Clp protease proteolytic subunit OS=Methylobacterium chloromethanicum (strain CM4 / NCIMB 13688) GN=clpP PE=3 SV=1) HSP 1 Score: 145.591 bits (366), Expect = 5.214e-34 Identity = 79/168 (47.02%), Postives = 110/168 (65.48%), Query Frame = 1 Query: 436 DTTNMLLRQRIIFLGSQVDDLTADFIISQLLFLDAEDSKKDIRLFINSPGGSVTAGMGIYDAMKLCKADVSTICLGLAASMGAFLLAAGSKGKRYCMPNARVMIHQPLGTAGGKATDMSIRIREMSYPRLS*TDII*SSRKAGQQNEL---DTDRDNFWDAWEARESG 930 D + LLR+RIIFL V+D A I++QLLFL+AE+ KK+I +INSPGG VT+G+ IYD M+ + V+T+C+G AASMG+ LLAAG G R+ +PNAR+M+HQP G G+ATD+ I RE+ + +I + G++ E +RDNF A A+E G Sbjct: 28 DIYSRLLRERIIFLTGPVEDQGASLIVAQLLFLEAENPKKEISFYINSPGGVVTSGLSIYDTMQFIRCPVTTLCVGQAASMGSLLLAAGEAGHRFALPNARIMVHQPSGGFQGQATDILIHAREIEALKKRLNEIY--VKHTGREYETIHQALERDNFMTADAAKEFG 193
BLAST of DY258638 vs. ExPASy Swiss-Prot
Match: CLPP3_FRASC (ATP-dependent Clp protease proteolytic subunit 3 OS=Frankia sp. (strain CcI3) GN=clpP3 PE=3 SV=2) HSP 1 Score: 145.591 bits (366), Expect = 5.214e-34 Identity = 74/167 (44.31%), Postives = 114/167 (68.26%), Query Frame = 1 Query: 433 LDTTNMLLRQRIIFLGSQVDDLTADFIISQLLFLDAEDSKKDIRLFINSPGGSVTAGMGIYDAMKLCKADVSTICLGLAASMGAFLLAAGSKGKRYCMPNARVMIHQPLGTAGGKATDMSIRIREMSYPR-LS*TDII*SSRKAGQQNELDTDRDNFWDAWEARESG 930 +D + LL++RI+FLG Q+DD++A+ +++QLLFL++ED +DI ++INSPGGS T+ IYD M+ + D+STIC+G AAS A LLAAG+ GKR+ + N+R++IHQP G+++D+ I+ RE+ R L T + + + + DT+RD + A EA E G Sbjct: 27 MDPYSKLLKERIVFLGVQIDDVSANDVMAQLLFLESEDPDRDISIYINSPGGSFTSLTAIYDTMQFVRPDISTICMGQAASAAAVLLAAGTPGKRFALENSRILIHQPSAQGEGQSSDIEIQAREILRVRALQETMLARHTGRTETEIRRDTERDKIFSADEAEEYG 193
BLAST of DY258638 vs. ExPASy Swiss-Prot
Match: CLPP_STRP7 (ATP-dependent Clp protease proteolytic subunit OS=Streptococcus pneumoniae (strain 70585) GN=clpP PE=3 SV=1) HSP 1 Score: 145.206 bits (365), Expect = 6.810e-34 Identity = 80/171 (46.78%), Postives = 111/171 (64.91%), Query Frame = 1 Query: 436 DTTNMLLRQRIIFLGSQVDDLTADFIISQLLFLDAEDSKKDIRLFINSPGGSVTAGMGIYDAMKLCKADVSTICLGLAASMGAFLLAAGSKGKRYCMPNARVMIHQPLGTAGG--KATDMSIRIREMSYPRLS*TDII*SSRKAGQQNE---LDTDRDNFWDAWEARESGW 933 D + LL+ RII L V+D A+ +I+QLLFLDA+DS KDI L++N+PGGSV+AG+ I D M KADV TI +G+AASMG + ++G+KGKR+ +PNA MIHQP+G GG + TDM+I + R + I+ + +GQ E D +RDN+ A E E G+ Sbjct: 17 DIYSRLLKDRIIMLTGPVEDSMANSVIAQLLFLDAQDSTKDIYLYVNTPGGSVSAGLAIVDTMNFIKADVQTIVMGMAASMGTVIASSGAKGKRFMLPNAEYMIHQPMGGTGGGTQQTDMAIAAEHLLKTRNTLEKIL--AENSGQSMEKVHADAERDNWMSAQETLEYGF 185 The following BLAST results are available for this feature:
BLAST of DY258638 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >DY258638 ID=DY258638; Name=DY258638; organism=Citrus clementina; type=EST; length=1147bpback to top |