DY258638
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of DY258638 vs. ExPASy Swiss-Prot
Match: CLPP1_SYNY3 (ATP-dependent Clp protease proteolytic subunit 1 OS=Synechocystis sp. (strain PCC 6803) GN=clpP1 PE=3 SV=1) HSP 1 Score: 173.326 bits (438), Expect = 2.335e-42 Identity = 89/166 (53.61%), Postives = 124/166 (74.70%), Query Frame = 1 Query: 436 DTTNMLLRQRIIFLGSQVDDLTADFIISQLLFLDAEDSKKDIRLFINSPGGSVTAGMGIYDAMKLCKADVSTICLGLAASMGAFLLAAGSKGKRYCMPNARVMIHQPLGTAGGKATDMSIRIREMSYPR-LS*TDII*SSRKAGQQNELDTDRDNFWDAWEARESG 930 D + LLR+RI+FLG +V D A+ +++QLLFL+AED +KDI L+INSPGGSV+AG+GI+D M + DV TIC+GLAASMGAFLL+AG+KGKR +PN+R+MIHQPLG A G+ATD+ I+ +E+ Y + L + + K+ ++ DT+RD F A E++E G Sbjct: 17 DIYSRLLRERIVFLGQEVRDENANLVVAQLLFLEAEDPEKDIYLYINSPGGSVSAGLGIFDTMNQIRPDVCTICIGLAASMGAFLLSAGAKGKRMSLPNSRIMIHQPLGGAQGQATDIEIQAKEILYLKALLNQHLANHTGKSLEEITADTERDFFMSAEESKEYG 182
BLAST of DY258638 vs. ExPASy Swiss-Prot
Match: CLPP_PSEMY (ATP-dependent Clp protease proteolytic subunit OS=Pseudomonas mendocina (strain ymp) GN=clpP PE=3 SV=1) HSP 1 Score: 172.94 bits (437), Expect = 3.050e-42 Identity = 92/168 (54.76%), Postives = 119/168 (70.83%), Query Frame = 1 Query: 436 DTTNMLLRQRIIFLGSQVDDLTADFIISQLLFLDAEDSKKDIRLFINSPGGSVTAGMGIYDAMKLCKADVSTICLGLAASMGAFLLAAGSKGKRYCMPNARVMIHQPLGTAGGKATDMSIRIREMSYPRLS*TDII*SSRKAGQQNEL---DTDRDNFWDAWEARESG 930 D + LL++R+IFL QV+D A+ I +QLLFL+AE+ KDI L+INSPGGSVTAGM IYD M+ KADVST C+G A SMGAFLLA G+KGKR+C+PN+RVMIHQPLG G+A+D+ I +E+ + R +++ + GQ E DT+RDNF A A E G Sbjct: 35 DIYSRLLKERVIFLVGQVEDYMANLICAQLLFLEAENPDKDIHLYINSPGGSVTAGMAIYDTMQFIKADVSTTCIGQACSMGAFLLAGGAKGKRFCLPNSRVMIHQPLGGFQGQASDIEIHAKEILFIRERLNELL--AHHTGQSLETIERDTNRDNFMSAPRAVEYG 200
BLAST of DY258638 vs. ExPASy Swiss-Prot
Match: CLPP_MOOTA (ATP-dependent Clp protease proteolytic subunit OS=Moorella thermoacetica (strain ATCC 39073) GN=clpP PE=3 SV=1) HSP 1 Score: 172.94 bits (437), Expect = 3.050e-42 Identity = 90/166 (54.22%), Postives = 120/166 (72.29%), Query Frame = 1 Query: 436 DTTNMLLRQRIIFLGSQVDDLTADFIISQLLFLDAEDSKKDIRLFINSPGGSVTAGMGIYDAMKLCKADVSTICLGLAASMGAFLLAAGSKGKRYCMPNARVMIHQPLGTAGGKATDMSIRIREMSYPRLS*TDII*S-SRKAGQQNELDTDRDNFWDAWEARESG 930 D + LL+ RIIFLGS +DD A+ +I+Q+LFL+AED KDI L+INSPGGS++AGM I+D M+ + DVSTIC+GLAASMGAFLLAAG+KGKR+ +PN+ +MIHQP+G G+A D+ I + + R + I+ + K +Q DTDRD+F A EARE G Sbjct: 20 DIYSRLLKDRIIFLGSAIDDHVANLVIAQMLFLEAEDPDKDIHLYINSPGGSISAGMAIFDTMQYIRPDVSTICVGLAASMGAFLLAAGAKGKRFALPNSEIMIHQPMGGTQGQAVDIEIHAKRILAIRDNLNRILSEITGKPLEQIARDTDRDHFMTAREAREYG 185
BLAST of DY258638 vs. ExPASy Swiss-Prot
Match: CLPP_CARHZ (ATP-dependent Clp protease proteolytic subunit OS=Carboxydothermus hydrogenoformans (strain Z-2901 / DSM 6008) GN=clpP PE=3 SV=1) HSP 1 Score: 172.94 bits (437), Expect = 3.050e-42 Identity = 91/168 (54.17%), Postives = 119/168 (70.83%), Query Frame = 1 Query: 436 DTTNMLLRQRIIFLGSQVDDLTADFIISQLLFLDAEDSKKDIRLFINSPGGSVTAGMGIYDAMKLCKADVSTICLGLAASMGAFLLAAGSKGKRYCMPNARVMIHQPLGTAGGKATDMSIRIREMSYPRLS*TDII*SSRKAGQQN---ELDTDRDNFWDAWEARESG 930 D + LL+ R IF+G +DD A+ +I+Q+LFL+AED +KDI L+INSPGG +TAGM IYD M+ K DVSTIC+G AASMGAFLLAAG+KGKR+ +P AR+MIHQPLG G+ATD+ I RE+ R +++ ++ GQ E DT+RD F A EA+E G Sbjct: 20 DIWSRLLKDRTIFIGGPIDDHVANLVIAQMLFLEAEDPEKDIHLYINSPGGVITAGMAIYDTMQYIKPDVSTICIGQAASMGAFLLAAGAKGKRFSLPYARIMIHQPLGGVQGQATDIDIHAREILRMRDMLNELL--TKHTGQPKEKIERDTERDFFMSAAEAKEYG 185
BLAST of DY258638 vs. ExPASy Swiss-Prot
Match: CLPP2_BURXL (ATP-dependent Clp protease proteolytic subunit 2 OS=Burkholderia xenovorans (strain LB400) GN=clpP2 PE=3 SV=1) HSP 1 Score: 172.94 bits (437), Expect = 3.050e-42 Identity = 89/168 (52.98%), Postives = 123/168 (73.21%), Query Frame = 1 Query: 436 DTTNMLLRQRIIFLGSQVDDLTADFIISQLLFLDAEDSKKDIRLFINSPGGSVTAGMGIYDAMKLCKADVSTICLGLAASMGAFLLAAGSKGKRYCMPNARVMIHQPLGTAGGKATDMSIRIREMSYPRLS*TDII*SSRKAGQQNE---LDTDRDNFWDAWEARESG 930 D + LL++RI+FL +V+D TA+ +++Q+LFL++E+ KDI +INSPGGSV+AGM IYD M+ K DVST+C+GLAASMGAFLLAAG+KGKR+ +PN+RVMIHQPLG A G+A+D+ I+ RE+ Y + ++ + GQ E DTDRDNF +A+ G Sbjct: 42 DIYSRLLKERIVFLVGEVNDQTANLVVAQMLFLESENPDKDISFYINSPGGSVSAGMAIYDTMQFIKPDVSTLCMGLAASMGAFLLAAGAKGKRFALPNSRVMIHQPLGGARGQASDIEIQAREILYLKERLNHLL--AHHTGQPVERIARDTDRDNFMSGDDAQAYG 207
BLAST of DY258638 vs. ExPASy Swiss-Prot
Match: CLPP_THIDA (ATP-dependent Clp protease proteolytic subunit OS=Thiobacillus denitrificans (strain ATCC 25259) GN=clpP PE=3 SV=1) HSP 1 Score: 172.555 bits (436), Expect = 3.983e-42 Identity = 88/168 (52.38%), Postives = 123/168 (73.21%), Query Frame = 1 Query: 436 DTTNMLLRQRIIFLGSQVDDLTADFIISQLLFLDAEDSKKDIRLFINSPGGSVTAGMGIYDAMKLCKADVSTICLGLAASMGAFLLAAGSKGKRYCMPNARVMIHQPLGTAGGKATDMSIRIREMSYPRLS*TDII*SSRKAGQQNEL---DTDRDNFWDAWEARESG 930 D + LL++R+IFL V+D TA+ I++Q+LFL++E+ KDI L+INSPGGSV+AG+ IYD M+ K DVST+C+G AASMGAFLL AG+KGKRYC+PN+RVMIHQPLG G+A+D+ I +E+ Y + ++ ++ GQ E+ DTDRDNF A ++ + G Sbjct: 33 DIYSRLLKERVIFLVGPVNDATANLIVAQMLFLESENPDKDIYLYINSPGGSVSAGLAIYDTMQFIKPDVSTLCIGQAASMGAFLLTAGAKGKRYCLPNSRVMIHQPLGGFQGQASDIEIHAKEILYLKARLNGML--AKHTGQSLEVIDRDTDRDNFMSAEDSVKYG 198
BLAST of DY258638 vs. ExPASy Swiss-Prot
Match: CLPP_SALTY (ATP-dependent Clp protease proteolytic subunit OS=Salmonella typhimurium GN=clpP PE=3 SV=1) HSP 1 Score: 172.555 bits (436), Expect = 3.983e-42 Identity = 92/168 (54.76%), Postives = 121/168 (72.02%), Query Frame = 1 Query: 436 DTTNMLLRQRIIFLGSQVDDLTADFIISQLLFLDAEDSKKDIRLFINSPGGSVTAGMGIYDAMKLCKADVSTICLGLAASMGAFLLAAGSKGKRYCMPNARVMIHQPLGTAGGKATDMSIRIREMSYPRLS*TDII*SSRKAGQ---QNELDTDRDNFWDAWEARESG 930 D + LL++R+IFL QV+D A+ I++Q+LFL+AE+ +KDI L+INSPGG +TAGM IYD M+ K DVSTIC+G AASMGAFLL AG+KGKR+C+PN+RVMIHQPLG G+ATD+ I RE+ + +++ + GQ Q E DT+RD F A EA E G Sbjct: 32 DIYSRLLKERVIFLTGQVEDHMANLIVAQMLFLEAENPEKDIYLYINSPGGVITAGMSIYDTMQFIKPDVSTICMGQAASMGAFLLTAGAKGKRFCLPNSRVMIHQPLGGYQGQATDIEIHAREILKVKGRMNELM--AHHTGQSLEQIERDTERDRFLSAPEAVEYG 197
BLAST of DY258638 vs. ExPASy Swiss-Prot
Match: CLPP_SALTI (ATP-dependent Clp protease proteolytic subunit OS=Salmonella typhi GN=clpP PE=3 SV=1) HSP 1 Score: 172.555 bits (436), Expect = 3.983e-42 Identity = 92/168 (54.76%), Postives = 121/168 (72.02%), Query Frame = 1 Query: 436 DTTNMLLRQRIIFLGSQVDDLTADFIISQLLFLDAEDSKKDIRLFINSPGGSVTAGMGIYDAMKLCKADVSTICLGLAASMGAFLLAAGSKGKRYCMPNARVMIHQPLGTAGGKATDMSIRIREMSYPRLS*TDII*SSRKAGQ---QNELDTDRDNFWDAWEARESG 930 D + LL++R+IFL QV+D A+ I++Q+LFL+AE+ +KDI L+INSPGG +TAGM IYD M+ K DVSTIC+G AASMGAFLL AG+KGKR+C+PN+RVMIHQPLG G+ATD+ I RE+ + +++ + GQ Q E DT+RD F A EA E G Sbjct: 32 DIYSRLLKERVIFLTGQVEDHMANLIVAQMLFLEAENPEKDIYLYINSPGGVITAGMSIYDTMQFIKPDVSTICMGQAASMGAFLLTAGAKGKRFCLPNSRVMIHQPLGGYQGQATDIEIHAREILKVKGRMNELM--AHHTGQSLEQIERDTERDRFLSAPEAVEYG 197
BLAST of DY258638 vs. ExPASy Swiss-Prot
Match: CLPP_SALSV (ATP-dependent Clp protease proteolytic subunit OS=Salmonella schwarzengrund (strain CVM19633) GN=clpP PE=3 SV=1) HSP 1 Score: 172.555 bits (436), Expect = 3.983e-42 Identity = 92/168 (54.76%), Postives = 121/168 (72.02%), Query Frame = 1 Query: 436 DTTNMLLRQRIIFLGSQVDDLTADFIISQLLFLDAEDSKKDIRLFINSPGGSVTAGMGIYDAMKLCKADVSTICLGLAASMGAFLLAAGSKGKRYCMPNARVMIHQPLGTAGGKATDMSIRIREMSYPRLS*TDII*SSRKAGQ---QNELDTDRDNFWDAWEARESG 930 D + LL++R+IFL QV+D A+ I++Q+LFL+AE+ +KDI L+INSPGG +TAGM IYD M+ K DVSTIC+G AASMGAFLL AG+KGKR+C+PN+RVMIHQPLG G+ATD+ I RE+ + +++ + GQ Q E DT+RD F A EA E G Sbjct: 32 DIYSRLLKERVIFLTGQVEDHMANLIVAQMLFLEAENPEKDIYLYINSPGGVITAGMSIYDTMQFIKPDVSTICMGQAASMGAFLLTAGAKGKRFCLPNSRVMIHQPLGGYQGQATDIEIHAREILKVKGRMNELM--AHHTGQSLEQIERDTERDRFLSAPEAVEYG 197
BLAST of DY258638 vs. ExPASy Swiss-Prot
Match: CLPP_SALNS (ATP-dependent Clp protease proteolytic subunit OS=Salmonella newport (strain SL254) GN=clpP PE=3 SV=1) HSP 1 Score: 172.555 bits (436), Expect = 3.983e-42 Identity = 92/168 (54.76%), Postives = 121/168 (72.02%), Query Frame = 1 Query: 436 DTTNMLLRQRIIFLGSQVDDLTADFIISQLLFLDAEDSKKDIRLFINSPGGSVTAGMGIYDAMKLCKADVSTICLGLAASMGAFLLAAGSKGKRYCMPNARVMIHQPLGTAGGKATDMSIRIREMSYPRLS*TDII*SSRKAGQ---QNELDTDRDNFWDAWEARESG 930 D + LL++R+IFL QV+D A+ I++Q+LFL+AE+ +KDI L+INSPGG +TAGM IYD M+ K DVSTIC+G AASMGAFLL AG+KGKR+C+PN+RVMIHQPLG G+ATD+ I RE+ + +++ + GQ Q E DT+RD F A EA E G Sbjct: 32 DIYSRLLKERVIFLTGQVEDHMANLIVAQMLFLEAENPEKDIYLYINSPGGVITAGMSIYDTMQFIKPDVSTICMGQAASMGAFLLTAGAKGKRFCLPNSRVMIHQPLGGYQGQATDIEIHAREILKVKGRMNELM--AHHTGQSLEQIERDTERDRFLSAPEAVEYG 197 The following BLAST results are available for this feature:
BLAST of DY258638 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >DY258638 ID=DY258638; Name=DY258638; organism=Citrus clementina; type=EST; length=1147bpback to top |