DY258641

Overview
NameDY258641
Unique NameDY258641
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length1314
Libraries
Library NameType
AbsDev1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
[Close]
BLAST of DY258641 vs. ExPASy Swiss-Prot
Match: VATA_AEDAE (V-type proton ATPase catalytic subunit A OS=Aedes aegypti GN=VhaA PE=2 SV=2)

HSP 1 Score: 69.707 bits (169), Expect = 6.877e-21
Identity = 39/68 (57.35%), Postives = 46/68 (67.65%), Query Frame = 3 
Query:  513 ARLASIYKRAGKVKCLGAPKRTGIVTIVGAVSPPEREFSKTVTSCQPPH*ASPI*G*EKKNTQKKHFP 716
            ARLAS Y+RAG+VKCLG P+R G V+IVGAVSPP  +FS  VTS           G +KK  Q+KHFP
Sbjct:  377 ARLASFYERAGRVKCLGNPEREGSVSIVGAVSPPGGDFSDPVTSATLGI-VQVFWGLDKKLAQRKHFP 443

HSP 2 Score: 53.1434 bits (126), Expect = 6.877e-21
Identity = 27/42 (64.29%), Postives = 32/42 (76.19%), Query Frame = 2 
Query:  383 FINRGYNVSMMEDSTSRW*EALSKISRRLAKMPAYNEYHEFL 508
            F + GYNVSMM DSTSRW EAL +IS RLA+MPA + Y  +L
Sbjct:  334 FRDMGYNVSMMADSTSRWAEALREISGRLAEMPADSGYPAYL 375
[Close]
BLAST of DY258641 vs. ExPASy Swiss-Prot
Match: VATA2_DROME (V-type proton ATPase catalytic subunit A isoform 2 OS=Drosophila melanogaster GN=Vha68-2 PE=1 SV=2)

HSP 1 Score: 69.707 bits (169), Expect = 6.877e-21
Identity = 39/68 (57.35%), Postives = 46/68 (67.65%), Query Frame = 3 
Query:  513 ARLASIYKRAGKVKCLGAPKRTGIVTIVGAVSPPEREFSKTVTSCQPPH*ASPI*G*EKKNTQKKHFP 716
            ARLAS Y+RAG+VKCLG P+R G V+IVGAVSPP  +FS  VTS           G +KK  Q+KHFP
Sbjct:  377 ARLASFYERAGRVKCLGNPEREGSVSIVGAVSPPGGDFSDPVTSATLGI-VQVFWGLDKKLAQRKHFP 443

HSP 2 Score: 53.1434 bits (126), Expect = 6.877e-21
Identity = 27/42 (64.29%), Postives = 32/42 (76.19%), Query Frame = 2 
Query:  383 FINRGYNVSMMEDSTSRW*EALSKISRRLAKMPAYNEYHEFL 508
            F + GYNVSMM DSTSRW EAL +IS RLA+MPA + Y  +L
Sbjct:  334 FRDMGYNVSMMADSTSRWAEALREISGRLAEMPADSGYPAYL 375
[Close]
BLAST of DY258641 vs. ExPASy Swiss-Prot
Match: VATA_BETVU (V-type proton ATPase catalytic subunit A OS=Beta vulgaris PE=2 SV=1)

HSP 1 Score: 71.633 bits (174), Expect = 8.943e-21
Identity = 40/68 (58.82%), Postives = 45/68 (66.18%), Query Frame = 3 
Query:  513 ARLASIYKRAGKVKCLGAPKRTGIVTIVGAVSPPEREFSKTVTSCQPPH*ASPI*G*EKKNTQKKHFP 716
            ARLAS Y+ AGKVKCLG P+R G VTIVGAVSPP  +FS  VTS           G +KK  Q+KHFP
Sbjct:  383 ARLASFYEAAGKVKCLGGPERNGSVTIVGAVSPPGGDFSDPVTSATLSI-VQVFWGLDKKLAQRKHFP 449

HSP 2 Score: 50.8322 bits (120), Expect = 8.943e-21
Identity = 26/43 (60.47%), Postives = 32/43 (74.42%), Query Frame = 2 
Query:  383 FINRGYNVSMMEDSTSRW*EALSKISRRLAKMPAYNEYHEFLS 511
            F + GYNVSMM DS SRW EAL +IS RLA+MPA + Y  +L+
Sbjct:  340 FRDMGYNVSMMADSGSRWAEALREISGRLAEMPADSGYPAYLA 382
[Close]
BLAST of DY258641 vs. ExPASy Swiss-Prot
Match: VATA_CHICK (V-type proton ATPase catalytic subunit A OS=Gallus gallus GN=ATP6V1A PE=2 SV=1)

HSP 1 Score: 71.2478 bits (173), Expect = 8.945e-21
Identity = 40/68 (58.82%), Postives = 46/68 (67.65%), Query Frame = 3 
Query:  513 ARLASIYKRAGKVKCLGAPKRTGIVTIVGAVSPPEREFSKTVTSCQPPH*ASPI*G*EKKNTQKKHFP 716
            ARLAS Y+RAG+VKCLG P+R G VTIVGAVSPP  +FS  VTS           G +KK  Q+KHFP
Sbjct:  380 ARLASFYERAGRVKCLGNPEREGSVTIVGAVSPPGGDFSDPVTSATLGI-VQVFWGLDKKLAQRKHFP 446

HSP 2 Score: 51.2174 bits (121), Expect = 8.945e-21
Identity = 26/42 (61.90%), Postives = 32/42 (76.19%), Query Frame = 2 
Query:  383 FINRGYNVSMMEDSTSRW*EALSKISRRLAKMPAYNEYHEFL 508
            F + GY+VSMM DSTSRW EAL +IS RLA+MPA + Y  +L
Sbjct:  337 FRDMGYHVSMMADSTSRWAEALREISGRLAEMPADSGYPAYL 378
[Close]
BLAST of DY258641 vs. ExPASy Swiss-Prot
Match: VATA_PLAFA (V-type proton ATPase catalytic subunit A OS=Plasmodium falciparum GN=vapA PE=3 SV=1)

HSP 1 Score: 72.0182 bits (175), Expect = 8.947e-21
Identity = 38/68 (55.88%), Postives = 46/68 (67.65%), Query Frame = 3 
Query:  513 ARLASIYKRAGKVKCLGAPKRTGIVTIVGAVSPPEREFSKTVTSCQPPH*ASPI*G*EKKNTQKKHFP 716
            ARLAS Y+RAGKVKC+G+P R G +TIVGAVSPP  +FS  VT+           G +KK  Q+KHFP
Sbjct:  374 ARLASFYERAGKVKCIGSPSRIGSITIVGAVSPPGGDFSDPVTTATMSI-VQAFWGLDKKLAQRKHFP 440

HSP 2 Score: 50.447 bits (119), Expect = 8.947e-21
Identity = 25/42 (59.52%), Postives = 31/42 (73.81%), Query Frame = 2 
Query:  383 FINRGYNVSMMEDSTSRW*EALSKISRRLAKMPAYNEYHEFL 508
            F + GYN +MM DSTSRW EAL +IS RLA+MPA + Y  +L
Sbjct:  331 FRDMGYNATMMADSTSRWAEALREISGRLAEMPADSGYPAYL 372
[Close]
BLAST of DY258641 vs. ExPASy Swiss-Prot
Match: VATA_PLAF7 (V-type proton ATPase catalytic subunit A OS=Plasmodium falciparum (isolate 3D7) GN=vapA PE=3 SV=1)

HSP 1 Score: 72.0182 bits (175), Expect = 8.947e-21
Identity = 38/68 (55.88%), Postives = 46/68 (67.65%), Query Frame = 3 
Query:  513 ARLASIYKRAGKVKCLGAPKRTGIVTIVGAVSPPEREFSKTVTSCQPPH*ASPI*G*EKKNTQKKHFP 716
            ARLAS Y+RAGKVKC+G+P R G +TIVGAVSPP  +FS  VT+           G +KK  Q+KHFP
Sbjct:  374 ARLASFYERAGKVKCIGSPSRIGSITIVGAVSPPGGDFSDPVTTATMSI-VQAFWGLDKKLAQRKHFP 440

HSP 2 Score: 50.447 bits (119), Expect = 8.947e-21
Identity = 25/42 (59.52%), Postives = 31/42 (73.81%), Query Frame = 2 
Query:  383 FINRGYNVSMMEDSTSRW*EALSKISRRLAKMPAYNEYHEFL 508
            F + GYN +MM DSTSRW EAL +IS RLA+MPA + Y  +L
Sbjct:  331 FRDMGYNATMMADSTSRWAEALREISGRLAEMPADSGYPAYL 372
[Close]
BLAST of DY258641 vs. ExPASy Swiss-Prot
Match: VATA_PONAB (V-type proton ATPase catalytic subunit A OS=Pongo abelii GN=ATP6V1A PE=2 SV=1)

HSP 1 Score: 69.707 bits (169), Expect = 2.560e-20
Identity = 39/68 (57.35%), Postives = 46/68 (67.65%), Query Frame = 3 
Query:  513 ARLASIYKRAGKVKCLGAPKRTGIVTIVGAVSPPEREFSKTVTSCQPPH*ASPI*G*EKKNTQKKHFP 716
            ARLAS Y+RAG+VKCLG P+R G V+IVGAVSPP  +FS  VTS           G +KK  Q+KHFP
Sbjct:  380 ARLASFYERAGRVKCLGNPEREGSVSIVGAVSPPGGDFSDPVTSATLGI-VQVFWGLDKKLAQRKHFP 446

HSP 2 Score: 51.2174 bits (121), Expect = 2.560e-20
Identity = 26/42 (61.90%), Postives = 32/42 (76.19%), Query Frame = 2 
Query:  383 FINRGYNVSMMEDSTSRW*EALSKISRRLAKMPAYNEYHEFL 508
            F + GY+VSMM DSTSRW EAL +IS RLA+MPA + Y  +L
Sbjct:  337 FRDMGYHVSMMADSTSRWAEALREISGRLAEMPADSGYPAYL 378
[Close]
BLAST of DY258641 vs. ExPASy Swiss-Prot
Match: VATA_MOUSE (V-type proton ATPase catalytic subunit A OS=Mus musculus GN=Atp6v1a PE=1 SV=2)

HSP 1 Score: 69.707 bits (169), Expect = 2.560e-20
Identity = 39/68 (57.35%), Postives = 46/68 (67.65%), Query Frame = 3 
Query:  513 ARLASIYKRAGKVKCLGAPKRTGIVTIVGAVSPPEREFSKTVTSCQPPH*ASPI*G*EKKNTQKKHFP 716
            ARLAS Y+RAG+VKCLG P+R G V+IVGAVSPP  +FS  VTS           G +KK  Q+KHFP
Sbjct:  380 ARLASFYERAGRVKCLGNPEREGSVSIVGAVSPPGGDFSDPVTSATLGI-VQVFWGLDKKLAQRKHFP 446

HSP 2 Score: 51.2174 bits (121), Expect = 2.560e-20
Identity = 26/42 (61.90%), Postives = 32/42 (76.19%), Query Frame = 2 
Query:  383 FINRGYNVSMMEDSTSRW*EALSKISRRLAKMPAYNEYHEFL 508
            F + GY+VSMM DSTSRW EAL +IS RLA+MPA + Y  +L
Sbjct:  337 FRDMGYHVSMMADSTSRWAEALREISGRLAEMPADSGYPAYL 378
[Close]
BLAST of DY258641 vs. ExPASy Swiss-Prot
Match: VATA_HUMAN (V-type proton ATPase catalytic subunit A OS=Homo sapiens GN=ATP6V1A PE=1 SV=2)

HSP 1 Score: 69.707 bits (169), Expect = 2.560e-20
Identity = 39/68 (57.35%), Postives = 46/68 (67.65%), Query Frame = 3 
Query:  513 ARLASIYKRAGKVKCLGAPKRTGIVTIVGAVSPPEREFSKTVTSCQPPH*ASPI*G*EKKNTQKKHFP 716
            ARLAS Y+RAG+VKCLG P+R G V+IVGAVSPP  +FS  VTS           G +KK  Q+KHFP
Sbjct:  380 ARLASFYERAGRVKCLGNPEREGSVSIVGAVSPPGGDFSDPVTSATLGI-VQVFWGLDKKLAQRKHFP 446

HSP 2 Score: 51.2174 bits (121), Expect = 2.560e-20
Identity = 26/42 (61.90%), Postives = 32/42 (76.19%), Query Frame = 2 
Query:  383 FINRGYNVSMMEDSTSRW*EALSKISRRLAKMPAYNEYHEFL 508
            F + GY+VSMM DSTSRW EAL +IS RLA+MPA + Y  +L
Sbjct:  337 FRDMGYHVSMMADSTSRWAEALREISGRLAEMPADSGYPAYL 378
[Close]
BLAST of DY258641 vs. ExPASy Swiss-Prot
Match: VATA_BOVIN (V-type proton ATPase catalytic subunit A OS=Bos taurus GN=ATP6V1A PE=2 SV=2)

HSP 1 Score: 69.707 bits (169), Expect = 2.560e-20
Identity = 39/68 (57.35%), Postives = 46/68 (67.65%), Query Frame = 3 
Query:  513 ARLASIYKRAGKVKCLGAPKRTGIVTIVGAVSPPEREFSKTVTSCQPPH*ASPI*G*EKKNTQKKHFP 716
            ARLAS Y+RAG+VKCLG P+R G V+IVGAVSPP  +FS  VTS           G +KK  Q+KHFP
Sbjct:  380 ARLASFYERAGRVKCLGNPEREGSVSIVGAVSPPGGDFSDPVTSATLGI-VQVFWGLDKKLAQRKHFP 446

HSP 2 Score: 51.2174 bits (121), Expect = 2.560e-20
Identity = 26/42 (61.90%), Postives = 32/42 (76.19%), Query Frame = 2 
Query:  383 FINRGYNVSMMEDSTSRW*EALSKISRRLAKMPAYNEYHEFL 508
            F + GY+VSMM DSTSRW EAL +IS RLA+MPA + Y  +L
Sbjct:  337 FRDMGYHVSMMADSTSRWAEALREISGRLAEMPADSGYPAYL 378
The following BLAST results are available for this feature:
BLAST of DY258641 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 121
Match NameE-valueIdentityDescription
VATA_AEDAE6.877e-2157.35V-type proton ATPase catalytic subunit A OS=Aedes ... [more]
VATA2_DROME6.877e-2157.35V-type proton ATPase catalytic subunit A isoform 2... [more]
VATA_BETVU8.943e-2158.82V-type proton ATPase catalytic subunit A OS=Beta v... [more]
VATA_CHICK8.945e-2158.82V-type proton ATPase catalytic subunit A OS=Gallus... [more]
VATA_PLAFA8.947e-2155.88V-type proton ATPase catalytic subunit A OS=Plasmo... [more]
VATA_PLAF78.947e-2155.88V-type proton ATPase catalytic subunit A OS=Plasmo... [more]
VATA_PONAB2.560e-2057.35V-type proton ATPase catalytic subunit A OS=Pongo ... [more]
VATA_MOUSE2.560e-2057.35V-type proton ATPase catalytic subunit A OS=Mus mu... [more]
VATA_HUMAN2.560e-2057.35V-type proton ATPase catalytic subunit A OS=Homo s... [more]
VATA_BOVIN2.560e-2057.35V-type proton ATPase catalytic subunit A OS=Bos ta... [more]

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Properties
Property NameValue
Genbank descriptionKN0AAI2DA10FM1 AbsDev1 Citrus clementina cDNA 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DY258641 ID=DY258641; Name=DY258641; organism=Citrus clementina; type=EST; length=1314bp
TTTTCACCTCCTTATGCAATTTCTCAGATTAGTAAACTGATGGGATTGAT
GGTAATAATAATTTTGTTTATTGTCTTTTTGCCCTGCATGGGGGAAGACA
AAAAGTTGTAAGTTTACGAATTTACATTCCAATCAGTAGAAAAGAAAAAG
GGTTATTCTTTAGACGTACAGGGTTTTTATATGTACATGGTCGTACTTAA
AGGTCTAGTTGTCATTTTTCTTATATAATGTATTATGTGTGAACACATAG
ATAATCACATTAAATTTAAAACAAAAAAAAAAATAAAAAAAACCCTACAT
ATACTTGCTGGAAAATGGTTTTATTATAAAGCATTGTTCTCTTGATTGTT
GCATCGAACCGGTAATCATCAGACAAAAATAATTCATAAATAGGGGGTAC
AATGTTAGCATGATGGAAGATTCAACTTCTCGTTGGTAAGAAGCGTTGAG
TAAAATTTCAAGACGGCTGGCAAAAATGCCTGCATATAATGAATATCATG
AATTCCTGTCATGCACGTTTGGCCTCAATATATAAACGTGCTGGGAAAGT
TAAATGTCTTGGTGCACCAAAACGTACAGGTATTGTCACAATTGTAGGTG
CAGTTTCTCCTCCTGAAAGAGAATTCTCAAAAACTGTAACTTCTTGCCAG
CCTCCCCATTGAGCAAGTCCTATCTAGGGTTAAGAAAAAAAAAATACCCA
AAAAAAGCATTTTCCCTTCTGTAAAATGGATTAATACTAAATCGAAATTA
TTCAACACCATTAAAATCTTTCCTTAAAACCAATTTAATCCGAAATTTTA
TTAAAACAAAGGAAAAAAGCTTGTAGGGGTGAAAACAAAAAAAAAATTAA
TCTAATAGTACTTTCTCACCTCGCTACAATAAGTAAGTTTTAGCTAAAAC
GATACACAAATCACCCAAAAAACTACAAAAGCTTTTTCAAGGACGGACTC
TCCTTATCCCATAAGAAATTATCTCCCAAAATAACAGCCTCCTCCCCTTT
CTTTTCACGTATTTTTTGGTAAAATACCCTAAAAATCTAACATCCTAATT
ATATAAATTCCACAAAAATAGAGATATACAAAAAAAAATAAAGCCATACA
ACTTCAAATGAAAACAAAAAAAAAACATTTTAATATCCTAACACTATTAT
GCTAAATGCATCCAATACGAAATAACTTCTTTTGATGAAAAAAAATCCTC
AAACCCCCACAAAACTATCTTCTCAAGACACCATCCCCAATCATCGAAGA
ACACATAAGAACACACATATCCTTATTTCTTTTCTTGTTTTTTTCACTAT
AATCATTAAAACAA
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