DY258641

Overview
NameDY258641
Unique NameDY258641
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length1314
Libraries
Library NameType
AbsDev1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
[Close]
BLAST of DY258641 vs. ExPASy Swiss-Prot
Match: VATA_SCHPO (V-type proton ATPase catalytic subunit A OS=Schizosaccharomyces pombe GN=vma1 PE=2 SV=1)

HSP 1 Score: 66.6254 bits (161), Expect = 7.792e-19
Identity = 36/68 (52.94%), Postives = 45/68 (66.18%), Query Frame = 3 
Query:  513 ARLASIYKRAGKVKCLGAPKRTGIVTIVGAVSPPEREFSKTVTSCQPPH*ASPI*G*EKKNTQKKHFP 716
            A+LAS Y+RAG+ +CLG+P R G V+IVGAVSPP  +FS  VTS           G +KK  Q+KHFP
Sbjct:  388 AKLASFYERAGRARCLGSPDREGTVSIVGAVSPPGGDFSDPVTSATLGI-VQVFWGLDKKLAQRKHFP 454

HSP 2 Score: 49.2914 bits (116), Expect = 7.792e-19
Identity = 25/40 (62.50%), Postives = 31/40 (77.50%), Query Frame = 2 
Query:  389 NRGYNVSMMEDSTSRW*EALSKISRRLAKMPAYNEYHEFL 508
            ++G NVSMM DSTSRW EAL +IS RLA+MPA + Y  +L
Sbjct:  347 DQGKNVSMMADSTSRWAEALREISGRLAEMPADSGYPAYL 386
[Close]
BLAST of DY258641 vs. ExPASy Swiss-Prot
Match: VATA_DICDI (V-type proton ATPase catalytic subunit A OS=Dictyostelium discoideum GN=vatA PE=1 SV=2)

HSP 1 Score: 65.4698 bits (158), Expect = 2.227e-18
Identity = 36/68 (52.94%), Postives = 44/68 (64.71%), Query Frame = 3 
Query:  513 ARLASIYKRAGKVKCLGAPKRTGIVTIVGAVSPPEREFSKTVTSCQPPH*ASPI*G*EKKNTQKKHFP 716
            ARLAS Y+RAG+V C+G P R G VTIVGAVSPP  +F+  VT+           G +KK  Q+KHFP
Sbjct:  381 ARLASFYERAGRVSCIGHPTRIGSVTIVGAVSPPGGDFADPVTAATLGI-VQVFWGLDKKLAQRKHFP 447

HSP 2 Score: 48.9062 bits (115), Expect = 2.227e-18
Identity = 25/42 (59.52%), Postives = 31/42 (73.81%), Query Frame = 2 
Query:  383 FINRGYNVSMMEDSTSRW*EALSKISRRLAKMPAYNEYHEFL 508
            F + G NV+MM DSTSRW EAL +IS RLA+MPA + Y  +L
Sbjct:  338 FRDMGLNVAMMADSTSRWAEALREISGRLAEMPADSGYPAYL 379
[Close]
BLAST of DY258641 vs. ExPASy Swiss-Prot
Match: VATA_NEUCR (V-type proton ATPase catalytic subunit A OS=Neurospora crassa GN=vma-1 PE=3 SV=1)

HSP 1 Score: 65.0846 bits (157), Expect = 5.195e-17
Identity = 37/68 (54.41%), Postives = 45/68 (66.18%), Query Frame = 3 
Query:  513 ARLASIYKRAGKVKCLGAPKRTGIVTIVGAVSPPEREFSKTVTSCQPPH*ASPI*G*EKKNTQKKHFP 716
            A+LAS Y+RAGKV+ LG+P R G V+IVGAVSPP  +FS  VTS           G +KK  Q+KHFP
Sbjct:  376 AKLASFYERAGKVQALGSPPREGSVSIVGAVSPPGGDFSDPVTSATLGI-VQVFWGLDKKLAQRKHFP 442

HSP 2 Score: 44.669 bits (104), Expect = 5.195e-17
Identity = 22/42 (52.38%), Postives = 30/42 (71.43%), Query Frame = 2 
Query:  383 FINRGYNVSMMEDSTSRW*EALSKISRRLAKMPAYNEYHEFL 508
            F ++G NV+MM DS+SRW EAL +IS RL +MPA   +  +L
Sbjct:  333 FRDQGMNVAMMADSSSRWAEALREISGRLGEMPADQGFPAYL 374
[Close]
BLAST of DY258641 vs. ExPASy Swiss-Prot
Match: VATA_AERPE (V-type ATP synthase alpha chain OS=Aeropyrum pernix GN=atpA PE=3 SV=2)

HSP 1 Score: 60.8474 bits (146), Expect = 3.444e-15
Identity = 28/44 (63.64%), Postives = 37/44 (84.09%), Query Frame = 3 
Query:  513 ARLASIYKRAGKVKCLGAPKRTGIVTIVGAVSPPEREFSKTVTS 644
            +RLA  Y+RAG+VK LG+P+R+G VT+VGAVSPP  +FS+ VTS
Sbjct:  369 SRLAEFYERAGRVKALGSPERSGSVTVVGAVSPPGGDFSEPVTS 412

HSP 2 Score: 42.743 bits (99), Expect = 3.444e-15
Identity = 20/39 (51.28%), Postives = 28/39 (71.79%), Query Frame = 2 
Query:  395 GYNVSMMEDSTSRW*EALSKISRRLAKMPAYNEYHEFLS 511
            GY+V ++ DSTSRW EAL +I+ RL +MPA   Y  +L+
Sbjct:  330 GYDVLLVADSTSRWAEALREIAGRLEEMPAEEGYPSYLA 368
[Close]
BLAST of DY258641 vs. ExPASy Swiss-Prot
Match: VATA_METKA (V-type ATP synthase alpha chain OS=Methanopyrus kandleri GN=atpA PE=3 SV=1)

HSP 1 Score: 55.8398 bits (133), Expect = 4.476e-15
Identity = 26/43 (60.47%), Postives = 33/43 (76.74%), Query Frame = 3 
Query:  513 ARLASIYKRAGKVKCLGAPKRTGIVTIVGAVSPPEREFSKTVT 641
            +RLA  Y+RAG+V CLG+  R G VT+VGAVSPP  +FS+ VT
Sbjct:  364 SRLAEFYERAGRVVCLGSDDRVGSVTVVGAVSPPGGDFSEPVT 406

HSP 2 Score: 47.3654 bits (111), Expect = 4.476e-15
Identity = 24/56 (42.86%), Postives = 35/56 (62.50%), Query Frame = 2 
Query:  344 DCCIEPVIIRQK*FINRGYNVSMMEDSTSRW*EALSKISRRLAKMPAYNEYHEFLS 511
            + CI   I   + + + GY+V++M DSTSRW EAL +IS RL +MP    Y  +L+
Sbjct:  308 EACIYTGITMAEYYRDMGYDVALMADSTSRWAEALREISGRLEEMPGEEGYPAYLA 363
[Close]
BLAST of DY258641 vs. ExPASy Swiss-Prot
Match: VATA_YEAST (V-type proton ATPase catalytic subunit A OS=Saccharomyces cerevisiae GN=TFP1 PE=1 SV=3)

HSP 1 Score: 58.151 bits (139), Expect = 9.685e-15
Identity = 34/68 (50.00%), Postives = 42/68 (61.76%), Query Frame = 3 
Query:  513 ARLASIYKRAGKVKCLGAPKRTGIVTIVGAVSPPEREFSKTVTSCQPPH*ASPI*G*EKKNTQKKHFP 716
            A+LAS Y+RAGK   LG+P RTG V+IV AVSP   +FS  VT+           G +KK  Q+KHFP
Sbjct:  841 AKLASFYERAGKAVALGSPDRTGSVSIVAAVSPAGGDFSDPVTTATLGI-TQVFWGLDKKLAQRKHFP 907

HSP 2 Score: 43.8986 bits (102), Expect = 9.685e-15
Identity = 22/42 (52.38%), Postives = 30/42 (71.43%), Query Frame = 2 
Query:  383 FINRGYNVSMMEDSTSRW*EALSKISRRLAKMPAYNEYHEFL 508
            F ++G NVSM+ DS+SRW EAL +IS RL +MPA   +  +L
Sbjct:  798 FRDQGKNVSMIADSSSRWAEALREISGRLGEMPADQGFPAYL 839
[Close]
BLAST of DY258641 vs. ExPASy Swiss-Prot
Match: VATA_CANTR (V-type proton ATPase catalytic subunit A OS=Candida tropicalis GN=VMA1 PE=3 SV=1)

HSP 1 Score: 56.225 bits (134), Expect = 3.582e-14
Identity = 33/68 (48.53%), Postives = 41/68 (60.29%), Query Frame = 3 
Query:  513 ARLASIYKRAGKVKCLGAPKRTGIVTIVGAVSPPEREFSKTVTSCQPPH*ASPI*G*EKKNTQKKHFP 716
            A+LAS Y+RAGK   LG+P R G V+IV AVSP   +FS  VT+           G +KK  Q+KHFP
Sbjct:  858 AKLASFYERAGKATALGSPDRVGSVSIVAAVSPAGGDFSDPVTT-STLGITQVFWGLDKKLAQRKHFP 924

HSP 2 Score: 43.8986 bits (102), Expect = 3.582e-14
Identity = 22/42 (52.38%), Postives = 30/42 (71.43%), Query Frame = 2 
Query:  383 FINRGYNVSMMEDSTSRW*EALSKISRRLAKMPAYNEYHEFL 508
            F ++G NVSM+ DS+SRW EAL +IS RL +MPA   +  +L
Sbjct:  815 FRDQGKNVSMIADSSSRWAEALREISGRLGEMPADQGFPAYL 856
[Close]
BLAST of DY258641 vs. ExPASy Swiss-Prot
Match: VATA_ASHGO (V-type proton ATPase catalytic subunit A OS=Ashbya gossypii GN=VMA1 PE=3 SV=2)

HSP 1 Score: 55.8398 bits (133), Expect = 4.717e-14
Identity = 33/68 (48.53%), Postives = 41/68 (60.29%), Query Frame = 3 
Query:  513 ARLASIYKRAGKVKCLGAPKRTGIVTIVGAVSPPEREFSKTVTSCQPPH*ASPI*G*EKKNTQKKHFP 716
            A+LAS Y+RAGK   LG+P R G V+IV AVSP   +FS  VT+           G +KK  Q+KHFP
Sbjct:  387 AKLASFYERAGKAVALGSPDRVGSVSIVAAVSPAGGDFSDPVTT-STLGITQVFWGLDKKLAQRKHFP 453

HSP 2 Score: 43.8986 bits (102), Expect = 4.717e-14
Identity = 22/42 (52.38%), Postives = 30/42 (71.43%), Query Frame = 2 
Query:  383 FINRGYNVSMMEDSTSRW*EALSKISRRLAKMPAYNEYHEFL 508
            F ++G NVSM+ DS+SRW EAL +IS RL +MPA   +  +L
Sbjct:  344 FRDQGKNVSMIADSSSRWAEALREISGRLGEMPADQGFPAYL 385
[Close]
BLAST of DY258641 vs. ExPASy Swiss-Prot
Match: VATA_STAMF (V-type ATP synthase alpha chain OS=Staphylothermus marinus (strain ATCC 43588 / DSM 3639 / F1) GN=atpA PE=3 SV=1)

HSP 1 Score: 56.225 bits (134), Expect = 1.344e-13
Identity = 27/43 (62.79%), Postives = 34/43 (79.07%), Query Frame = 3 
Query:  513 ARLASIYKRAGKVKCLGAPKRTGIVTIVGAVSPPEREFSKTVT 641
            +RLAS Y+R+G VK LG P RTG +TI+GAVSPP  +FS+ VT
Sbjct:  359 SRLASFYERSGYVKTLGRPDRTGSLTIMGAVSPPGADFSEPVT 401

HSP 2 Score: 41.9726 bits (97), Expect = 1.344e-13
Identity = 20/42 (47.62%), Postives = 28/42 (66.67%), Query Frame = 2 
Query:  383 FINRGYNVSMMEDSTSRW*EALSKISRRLAKMPAYNEYHEFL 508
            F + GY+V M+ DSTSRW EA+ +IS RL ++P    Y  +L
Sbjct:  316 FRDMGYHVLMVADSTSRWAEAMREISGRLEELPGEEGYPAYL 357
[Close]
BLAST of DY258641 vs. ExPASy Swiss-Prot
Match: VATA_CLONN (V-type ATP synthase alpha chain OS=Clostridium novyi (strain NT) GN=atpA PE=3 SV=1)

HSP 1 Score: 51.9878 bits (123), Expect = 1.746e-13
Identity = 24/43 (55.81%), Postives = 31/43 (72.09%), Query Frame = 3 
Query:  513 ARLASIYKRAGKVKCLGAPKRTGIVTIVGAVSPPEREFSKTVT 641
            +RLA  Y+RAGKV CLG  +R G +T +GAVSPP  + S+ VT
Sbjct:  359 SRLADFYERAGKVVCLGDDEREGAITAIGAVSPPGGDLSEPVT 401

HSP 2 Score: 45.8246 bits (107), Expect = 1.746e-13
Identity = 24/55 (43.64%), Postives = 34/55 (61.82%), Query Frame = 2 
Query:  344 DCCIEPVIIRQK*FINRGYNVSMMEDSTSRW*EALSKISRRLAKMPAYNEYHEFL 508
            + CI   I   + F + GY+V++M DSTSRW EAL ++S RL +MP    Y  +L
Sbjct:  303 EACIYTGITIAEYFRDMGYSVALMADSTSRWAEALREMSGRLEEMPGDEGYPAYL 357
The following BLAST results are available for this feature:
BLAST of DY258641 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 121
Match NameE-valueIdentityDescription
VATA_SCHPO7.792e-1952.94V-type proton ATPase catalytic subunit A OS=Schizo... [more]
VATA_DICDI2.227e-1852.94V-type proton ATPase catalytic subunit A OS=Dictyo... [more]
VATA_NEUCR5.195e-1754.41V-type proton ATPase catalytic subunit A OS=Neuros... [more]
VATA_AERPE3.444e-1563.64V-type ATP synthase alpha chain OS=Aeropyrum perni... [more]
VATA_METKA4.476e-1560.47V-type ATP synthase alpha chain OS=Methanopyrus ka... [more]
VATA_YEAST9.685e-1550.00V-type proton ATPase catalytic subunit A OS=Saccha... [more]
VATA_CANTR3.582e-1448.53V-type proton ATPase catalytic subunit A OS=Candid... [more]
VATA_ASHGO4.717e-1448.53V-type proton ATPase catalytic subunit A OS=Ashbya... [more]
VATA_STAMF1.344e-1362.79V-type ATP synthase alpha chain OS=Staphylothermus... [more]
VATA_CLONN1.746e-1355.81V-type ATP synthase alpha chain OS=Clostridium nov... [more]

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Properties
Property NameValue
Genbank descriptionKN0AAI2DA10FM1 AbsDev1 Citrus clementina cDNA 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DY258641 ID=DY258641; Name=DY258641; organism=Citrus clementina; type=EST; length=1314bp
TTTTCACCTCCTTATGCAATTTCTCAGATTAGTAAACTGATGGGATTGAT
GGTAATAATAATTTTGTTTATTGTCTTTTTGCCCTGCATGGGGGAAGACA
AAAAGTTGTAAGTTTACGAATTTACATTCCAATCAGTAGAAAAGAAAAAG
GGTTATTCTTTAGACGTACAGGGTTTTTATATGTACATGGTCGTACTTAA
AGGTCTAGTTGTCATTTTTCTTATATAATGTATTATGTGTGAACACATAG
ATAATCACATTAAATTTAAAACAAAAAAAAAAATAAAAAAAACCCTACAT
ATACTTGCTGGAAAATGGTTTTATTATAAAGCATTGTTCTCTTGATTGTT
GCATCGAACCGGTAATCATCAGACAAAAATAATTCATAAATAGGGGGTAC
AATGTTAGCATGATGGAAGATTCAACTTCTCGTTGGTAAGAAGCGTTGAG
TAAAATTTCAAGACGGCTGGCAAAAATGCCTGCATATAATGAATATCATG
AATTCCTGTCATGCACGTTTGGCCTCAATATATAAACGTGCTGGGAAAGT
TAAATGTCTTGGTGCACCAAAACGTACAGGTATTGTCACAATTGTAGGTG
CAGTTTCTCCTCCTGAAAGAGAATTCTCAAAAACTGTAACTTCTTGCCAG
CCTCCCCATTGAGCAAGTCCTATCTAGGGTTAAGAAAAAAAAAATACCCA
AAAAAAGCATTTTCCCTTCTGTAAAATGGATTAATACTAAATCGAAATTA
TTCAACACCATTAAAATCTTTCCTTAAAACCAATTTAATCCGAAATTTTA
TTAAAACAAAGGAAAAAAGCTTGTAGGGGTGAAAACAAAAAAAAAATTAA
TCTAATAGTACTTTCTCACCTCGCTACAATAAGTAAGTTTTAGCTAAAAC
GATACACAAATCACCCAAAAAACTACAAAAGCTTTTTCAAGGACGGACTC
TCCTTATCCCATAAGAAATTATCTCCCAAAATAACAGCCTCCTCCCCTTT
CTTTTCACGTATTTTTTGGTAAAATACCCTAAAAATCTAACATCCTAATT
ATATAAATTCCACAAAAATAGAGATATACAAAAAAAAATAAAGCCATACA
ACTTCAAATGAAAACAAAAAAAAAACATTTTAATATCCTAACACTATTAT
GCTAAATGCATCCAATACGAAATAACTTCTTTTGATGAAAAAAAATCCTC
AAACCCCCACAAAACTATCTTCTCAAGACACCATCCCCAATCATCGAAGA
ACACATAAGAACACACATATCCTTATTTCTTTTCTTGTTTTTTTCACTAT
AATCATTAAAACAA
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