DY258646
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of DY258646 vs. ExPASy Swiss-Prot
Match: RAB4A_RAT (Ras-related protein Rab-4A OS=Rattus norvegicus GN=Rab4a PE=2 SV=2) HSP 1 Score: 218.779 bits (556), Expect = 3.528e-56 Identity = 109/186 (58.60%), Postives = 141/186 (75.81%), Query Frame = 2 Query: 155 YDYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMVTIDGRPIKLQIWDTAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLSSWLEDARQHANPNMSIMLVGNKCDLAHRRAVSKEEGEQFAKENGLLFLEASARTAQNVEEAFIKTAAKILQNIQEGALDAVNDQSGIKVG 712 YD+LFK+++IG+ G GKSCLL QF +K+F+ + TIGVEFG++++ + G+ +KLQIWDTAGQE FRS+TRSYYRGAAGALLVYDIT RET+N L++WL DAR A+ N+ I+L GNK DL R V+ E +FA+EN L+FLE SA T +NVEEAF++ A KIL I+ G LD SGI+ G Sbjct: 5 YDFLFKFLVIGNAGTGKSCLLHQFIEKKFKDDSNHTIGVEFGSKIINVGGKYVKLQIWDTAGQERFRSVTRSYYRGAAGALLVYDITSRETYNALTNWLTDARMLASQNIVIILCGNKKDLDADREVTFLEASRFAQENELMFLETSALTGENVEEAFMQCARKILNKIESGELDPERMGSGIQYG 190
BLAST of DY258646 vs. ExPASy Swiss-Prot
Match: RAB4A_DANRE (Ras-related protein Rab-4A OS=Danio rerio GN=rab4a PE=2 SV=2) HSP 1 Score: 217.624 bits (553), Expect = 7.859e-56 Identity = 109/186 (58.60%), Postives = 141/186 (75.81%), Query Frame = 2 Query: 155 YDYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMVTIDGRPIKLQIWDTAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLSSWLEDARQHANPNMSIMLVGNKCDLAHRRAVSKEEGEQFAKENGLLFLEASARTAQNVEEAFIKTAAKILQNIQEGALDAVNDQSGIKVG 712 YD+LFK+++IG+ G GKSCLL QF +KRF+ + TIGVEFG++++++ + +KLQIWDTAGQE FRS+TRSYYRGAAGALLVYDIT RET+N L++WL DAR A+ N+ I+L GNK DL R V+ E +FA+EN L+FLE SA T +NVEEAF++ A KIL I+ G LD SGI+ G Sbjct: 5 YDFLFKFLVIGNAGTGKSCLLHQFIEKRFKDDSNHTIGVEFGSKIISVVNKFVKLQIWDTAGQERFRSVTRSYYRGAAGALLVYDITSRETYNALTNWLTDARMLASQNIVIILCGNKKDLDADREVTFLEASRFAQENELMFLETSALTGENVEEAFVQCARKILNKIESGELDPERMGSGIQYG 190
BLAST of DY258646 vs. ExPASy Swiss-Prot
Match: RAB4A_MOUSE (Ras-related protein Rab-4A OS=Mus musculus GN=Rab4a PE=1 SV=1) HSP 1 Score: 216.853 bits (551), Expect = 1.341e-55 Identity = 107/186 (57.53%), Postives = 141/186 (75.81%), Query Frame = 2 Query: 155 YDYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMVTIDGRPIKLQIWDTAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLSSWLEDARQHANPNMSIMLVGNKCDLAHRRAVSKEEGEQFAKENGLLFLEASARTAQNVEEAFIKTAAKILQNIQEGALDAVNDQSGIKVG 712 YD+LFK+++IG+ G GKSCLL QF +K+F+ + TIG+EFG++++ + G+ +KLQIWDTAGQE FRS+TRSYYRGAAGALLVYDIT RET+N L++WL DAR A+ N+ ++L GNK DL R V+ E +FA+EN L+FLE SA T +NVEEAF++ A KIL I+ G LD SGI+ G Sbjct: 5 YDFLFKFLVIGNAGTGKSCLLHQFIEKKFKDDSNHTIGMEFGSKIINVGGKYVKLQIWDTAGQERFRSVTRSYYRGAAGALLVYDITSRETYNALTNWLTDARMLASQNIVLILCGNKKDLDADREVTFLEASRFAQENELMFLETSALTGENVEEAFMQCARKILNKIESGELDPERMGSGIQYG 190
BLAST of DY258646 vs. ExPASy Swiss-Prot
Match: RAB2B_DICDI (Ras-related protein Rab-2B OS=Dictyostelium discoideum GN=rab2B PE=3 SV=1) HSP 1 Score: 209.149 bits (531), Expect = 2.795e-53 Identity = 99/170 (58.24%), Postives = 134/170 (78.82%), Query Frame = 2 Query: 155 YDYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMVTIDGRPIKLQIWDTAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLSSWLEDARQHANPNMSIMLVGNKCDLAHRRAVSKEEGEQFAKENGLLFLEASARTAQNVEEAFIKTAAKILQNIQ 664 Y++LFKYI++GD+ VGKS LLLQF DKRF P D TIGVEFG+R + I+ + IKLQIWDTAGQE FRSITR+YYRGA A++VYDITRR++F L+SWL D R+ ++ +++ +L+GNK DL R VS E ++FA++NGL+F E SA+TA NV+EAF K+ +IL+ ++ Sbjct: 21 YEHLFKYIMVGDSAVGKSNLLLQFVDKRFAPNSDFTIGVEFGSRSININDKQIKLQIWDTAGQEKFRSITRAYYRGAVCAMIVYDITRRDSFESLNSWLTDCRKFSSCDVTTVLIGNKADLEANRQVSTSEAKEFAEKNGLMFFETSAKTALNVDEAFEKSTEQILKKLE 190
BLAST of DY258646 vs. ExPASy Swiss-Prot
Match: RIC2_ORYSJ (Ras-related protein RIC2 OS=Oryza sativa subsp. japonica GN=RIC2 PE=2 SV=2) HSP 1 Score: 202.986 bits (515), Expect = 2.003e-51 Identity = 100/209 (47.85%), Postives = 139/209 (66.51%), Query Frame = 2 Query: 155 YDYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMVTIDGRPIKLQIWDTAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLSSWLEDARQHANPNMSIMLVGNKCDLAHRRAVSKEEGEQFAKENGLLFLEASARTAQNVEEAFIKTAAKILQNIQEGALDAVNDQSGIKVGYGRGQGPSGARDGTVSQRGGCCS 781 YDYLFK ++IGD+GVGKS LL +FT F TIGVEF R + +DG+ +K QIWDTAGQE +R+IT +YYRGA GALLVYD+TR TF ++ WL++ R H +PN+ +MLVGNK DL H AV +EG+ FA+ L F+E SA + NVE AF + +I + + + +++A +D G G+G+ + D + ++GGCCS Sbjct: 11 YDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSLQVDGKVVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHSTFENVERWLKELRDHTDPNIVVMLVGNKSDLRHLVAVQTDEGKAFAERESLYFMETSALESTNVENAFAEVLTQIYRIVSKRSVEAGDDAGS---GPGKGEKINIKDDVSAVKKGGCCS 216
BLAST of DY258646 vs. ExPASy Swiss-Prot
Match: RAA1A_ARATH (Ras-related protein RABA1a OS=Arabidopsis thaliana GN=RABA1A PE=2 SV=1) HSP 1 Score: 202.216 bits (513), Expect = 3.417e-51 Identity = 98/209 (46.89%), Postives = 137/209 (65.55%), Query Frame = 2 Query: 155 YDYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMVTIDGRPIKLQIWDTAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLSSWLEDARQHANPNMSIMLVGNKCDLAHRRAVSKEEGEQFAKENGLLFLEASARTAQNVEEAFIKTAAKILQNIQEGALDAVNDQSGIKVGYGRGQGPSGARDGTVSQRGGCCS 781 YDYLFK ++IGD+GVGKS LL +FT F TIGVEF + ++G+ +K QIWDTAGQE +R+IT +YYRGA GALL+YD+TR TF + + WL + R H +PN+ +ML+GNKCDL H AV EE + FA+ L F+E SA A NVE AF + +I + + + ++D + + + G+G+ + DG+V +R GCCS Sbjct: 10 YDYLFKLVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATKTTKVEGKVVKAQIWDTAGQERYRAITSAYYRGAVGALLIYDVTRHATFENAARWLRELRGHTDPNIVVMLIGNKCDLRHLVAVKTEEAKAFAERESLYFMETSALDATNVENAFTEVLTQIHKIVSKRSVDGGGESADLP---GKGETINVKEDGSVLKRMGCCS 215
BLAST of DY258646 vs. ExPASy Swiss-Prot
Match: RB2BV_BETVU (Ras-related protein Rab2BV OS=Beta vulgaris GN=RAB2BV PE=2 SV=1) HSP 1 Score: 201.06 bits (510), Expect = 7.612e-51 Identity = 104/210 (49.52%), Postives = 139/210 (66.19%), Query Frame = 2 Query: 155 YDYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMVTIDGRPIKLQIWDTAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLSSWLEDARQHANPNMSIMLVGNKCDLAHRRAVSKEEGEQFAKENGLLFLEASARTAQNVEEAFIKTAAKILQNIQEGALDAVNDQSGIKVGYGRGQGPS-GARDGTVSQRGGCCS 781 YDYLFK ++IGD+GVGKS +L +FT F TIGVEF R + ++G+ +K QIWDTAGQE +R+IT +YYRGA GALLVYDIT+R+TF+++ WL + R HA+ N+ IM+ GNK DL H RAVS+E+G+ A++ GL FLE SA A N+E+AF +I I + AL A S + GQG + D + +QR CCS Sbjct: 9 YDYLFKIVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFATRTLQVEGKTVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDITKRQTFDNVQRWLRELRDHADSNIVIMMAGNKSDLKHLRAVSEEDGQALAEKEGLSFLETSALEAVNIEKAFQTILTEIYHIISKKALAAQEASSNLP-----GQGTTINVADASANQRRSCCS 213
BLAST of DY258646 vs. ExPASy Swiss-Prot
Match: RB11D_LOTJA (Ras-related protein Rab11D OS=Lotus japonicus GN=RAB11D PE=2 SV=1) HSP 1 Score: 201.06 bits (510), Expect = 7.612e-51 Identity = 102/210 (48.57%), Postives = 138/210 (65.71%), Query Frame = 2 Query: 155 YDYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMVTIDGRPIKLQIWDTAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLSSWLEDARQHANPNMSIMLVGNKCDLAHRRAVSKEEGEQFAKENGLLFLEASARTAQNVEEAFIKTAAKILQNIQEGALDAVNDQSGIKVGY-GRGQGPSGARDGTVSQRGGCCS 781 YDYLFK ++IGD+GVGKS LL +FT F TIGVEF + + +D + +K QIWDTAGQE +R+IT +YYRGA GALLVYD+TRR TF + + WL++ R H +PN+ +ML+GNK DL H AV E+G+ FA+ L F+E SA A NVE AF + +I + + + A++A SG G +GQ + D +V +R GCCS Sbjct: 10 YDYLFKLVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATKTLNVDAKVVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRRATFENAARWLKELRDHTDPNIVVMLIGNKSDLRHLVAVPTEDGKSFAERESLYFMETSALEATNVENAFTEVLTQIYRIVSKRAVEA--GDSGSSSGLPSKGQTINVKEDSSVLKRFGCCS 217
BLAST of DY258646 vs. ExPASy Swiss-Prot
Match: RAA1C_ARATH (Ras-related protein RABA1c OS=Arabidopsis thaliana GN=RABA1C PE=1 SV=1) HSP 1 Score: 200.675 bits (509), Expect = 9.942e-51 Identity = 98/209 (46.89%), Postives = 137/209 (65.55%), Query Frame = 2 Query: 155 YDYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMVTIDGRPIKLQIWDTAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLSSWLEDARQHANPNMSIMLVGNKCDLAHRRAVSKEEGEQFAKENGLLFLEASARTAQNVEEAFIKTAAKILQNIQEGALDAVNDQSGIKVGYGRGQGPSGARDGTVSQRGGCCS 781 YDYLFK ++IGD+GVGKS LL +FT F TIGVEF R + +D + IK QIWDTAGQE +R+IT +YYRGA GALLVYD+TR TF ++ +WL++ R H +PN+ +MLVGNK DL H AV E+ + FA++ L F+E SA A NVE AF + +I + + A++A ++ + + +G +D + ++GGCCS Sbjct: 10 YDYLFKVVLIGDSGVGKSNLLSRFTKNEFSLESKSTIGVEFATRSLNVDDKVIKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHSTFENVETWLKELRNHTDPNIVVMLVGNKSDLRHLVAVQTEDAKSFAEKESLYFMETSALEATNVENAFAEVLTQIHHIVSKKAMEAASESANVP---SKGDKIDIGKDVSAVKKGGCCS 215
BLAST of DY258646 vs. ExPASy Swiss-Prot
Match: YPT3_SCHPO (GTP-binding protein ypt3 OS=Schizosaccharomyces pombe GN=ypt3 PE=1 SV=1) HSP 1 Score: 198.364 bits (503), Expect = 4.934e-50 Identity = 97/179 (54.19%), Postives = 128/179 (71.51%), Query Frame = 2 Query: 155 YDYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMVTIDGRPIKLQIWDTAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLSSWLEDARQHANPNMSIMLVGNKCDLAHRRAVSKEEGEQFAKENGLLFLEASARTAQNVEEAFIKTAAKILQNIQEGALDAVND 691 YDYLFK ++IGD+GVGKS LL++FT F TIGVEF R + +D + IK QIWDTAGQE +R+IT +YYRGA GAL+VYDIT++ +F+++ WL++ R+HA+ N+ IMLVGNK DL H RAVS EE + FA EN L F+E SA A NVEEAF +I + + +L+A +D Sbjct: 7 YDYLFKTVLIGDSGVGKSNLLMRFTRNEFNIESKSTIGVEFATRNIVLDNKKIKAQIWDTAGQERYRAITSAYYRGAVGALIVYDITKQSSFDNVGRWLKELREHADSNIVIMLVGNKTDLLHLRAVSTEEAQAFAAENNLSFIETSAMDASNVEEAFQTVLTEIFRIVSNRSLEAGDD 185 The following BLAST results are available for this feature:
BLAST of DY258646 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >DY258646 ID=DY258646; Name=DY258646; organism=Citrus clementina; type=EST; length=916bpback to top |