DY258646
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of DY258646 vs. ExPASy Swiss-Prot
Match: RB11E_LOTJA (Ras-related protein Rab11E OS=Lotus japonicus GN=RAB11E PE=2 SV=1) HSP 1 Score: 197.978 bits (502), Expect = 6.444e-50 Identity = 102/209 (48.80%), Postives = 135/209 (64.59%), Query Frame = 2 Query: 155 YDYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMVTIDGRPIKLQIWDTAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLSSWLEDARQHANPNMSIMLVGNKCDLAHRRAVSKEEGEQFAKENGLLFLEASARTAQNVEEAFIKTAAKILQNIQEGALDAVNDQSGIKVGYGRGQGPSGARDGTVSQRGGCCS 781 YDYLFK ++IGD+GVGKS LL +FT F TIGVEF + + IDG+ IK QIWDTAGQE +R+IT +YYRGA GALLVYD+TR TF WL++ R H +PN+ +ML+GNK DL H VS E+G+ FA++ L F+E SA A NVE AF + +I + + + A++A D+ V +GQ + D +V R CCS Sbjct: 10 YDYLFKLVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATKSLNIDGKVIKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRSTTFETAGRWLKELRDHTDPNIVVMLIGNKSDLRHLVTVSTEDGKAFAEKESLYFMETSALEATNVENAFSEVLTQIYRIVSKRAVEA-GDRPSTSVVPSQGQTINVNEDSSVLNRYRCCS 217
BLAST of DY258646 vs. ExPASy Swiss-Prot
Match: YPTC6_CHLRE (Ras-related protein YPTC6 OS=Chlamydomonas reinhardtii GN=YPTC6 PE=3 SV=1) HSP 1 Score: 196.823 bits (499), Expect = 1.436e-49 Identity = 103/210 (49.05%), Postives = 136/210 (64.76%), Query Frame = 2 Query: 155 YDYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMVTIDGRPIKLQIWDTAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLSSWLEDARQHANPNMSIMLVGNKCDLAHRRAVSKEEGEQFAKENGLLFLEASARTAQNVEEAFIKTAAKILQNIQEGALDAVNDQSGIKVGYGRGQ-GPSGARDGTVSQRGGCCS 781 YDYLFK ++IGD+GVGKS LL +FT F TIGVEF R + +DG+ IK QIWDTAGQE +R+IT +YYRGA GALLVYDIT+ TF ++ WL++ R HA+ N+ IMLVGNK DL H R V E + F + GL F+E SA + NVE+AF + +I + + LD+ +++ K+G GR A D ++GGCCS Sbjct: 9 YDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIQVDGKTIKAQIWDTAGQERYRAITSAYYRGAVGALLVYDITKSVTFENVERWLKELRDHADSNIVIMLVGNKSDLKHLRDVQTEVAQAFCEREGLSFIETSALESTNVEKAFQQILTEIYHIVSKKVLDSEDNRP--KIGEGRDVIVIDNAHDDGGKKKGGCCS 216
BLAST of DY258646 vs. ExPASy Swiss-Prot
Match: RAB1_DISOM (Ras-related protein ORAB-1 OS=Discopyge ommata PE=2 SV=1) HSP 1 Score: 196.052 bits (497), Expect = 2.449e-49 Identity = 96/208 (46.15%), Postives = 138/208 (66.35%), Query Frame = 2 Query: 155 YDYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMVTIDGRPIKLQIWDTAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLSSWLEDARQHANPNMSIMLVGNKCDLAHRRAVSKEEGEQFAKENGLLFLEASARTAQNVEEAFIKTAAKILQNIQEGALDAVNDQSGIKVGYGRGQGPSGARDGTVSQRGGCC 778 YDYLFK ++IGD+GVGKSCLLL+F D + + TIGV+F R + +DG+ IKLQIWDTAGQE FR+IT SYYRGA G ++VYD+T +E+FN++ WL++ ++A+ N++ +LVGNKCDL ++ V ++FA G+ FLE SA+ A NVE+AF+ AA+I + + GA +++S + + S GGCC Sbjct: 5 YDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTIKLQIWDTAGQERFRTITSSYYRGAHGIIVVYDVTDQESFNNVKQWLQEIDRYASENVNKLLVGNKCDLTTKKVVDYTTAKEFADSLGIPFLETSAKNATNVEQAFMTMAAEIKKRMGPGATSGGSEKSNVNI----------QSTPVKSSGGGCC 202
BLAST of DY258646 vs. ExPASy Swiss-Prot
Match: RB11C_LOTJA (Ras-related protein Rab11C OS=Lotus japonicus GN=RAB11C PE=2 SV=1) HSP 1 Score: 195.282 bits (495), Expect = 4.177e-49 Identity = 101/210 (48.10%), Postives = 139/210 (66.19%), Query Frame = 2 Query: 155 YDYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMVTIDGRPIKLQIWDTAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLSSWLEDARQHANPNMSIMLVGNKCDLAHRRAVSKEEGEQFAKENGLLFLEASARTAQNVEEAFIKTAAKILQNIQEGALDAVNDQSGIKVGYGRGQGPS-GARDGTVSQRGGCCS 781 YDYLFK ++IGD+GVGKS +L +FT F TIGVEF R + ++G+ +K QIWDTAGQE +R+IT +YYRGA GALLVYDIT+R+TF+++ WL + R HA+ N+ IM+ GNK DL H RAVS+++G +++ GL FLE SA A N+E+AF +I + + AL A +G V GQG + D + + + GCCS Sbjct: 9 YDYLFKIVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFATRTLQVEGKTVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDITKRQTFDNVQRWLRELRDHADSNIVIMMAGNKSDLNHLRAVSEDDGGALSEKEGLSFLETSALEATNIEKAFQTILTEIYHIVSKKALAAQEATAGASV---PGQGTTINVADTSGNTKKGCCS 215
BLAST of DY258646 vs. ExPASy Swiss-Prot
Match: RAA1B_ARATH (Ras-related protein RABA1b OS=Arabidopsis thaliana GN=RABA1B PE=2 SV=1) HSP 1 Score: 195.282 bits (495), Expect = 4.177e-49 Identity = 97/209 (46.41%), Postives = 136/209 (65.07%), Query Frame = 2 Query: 155 YDYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMVTIDGRPIKLQIWDTAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLSSWLEDARQHANPNMSIMLVGNKCDLAHRRAVSKEEGEQFAKENGLLFLEASARTAQNVEEAFIKTAAKILQNIQEGALDAVNDQSGIKVGYGRGQGPSGARDGTVSQRGGCCS 781 YDYLFK ++IGD+GVGKS LL +FT F TIGVEF R + +DG+ +K QIWDTAGQE +R+IT +YYRGA GALLVYD+TRR TF ++ WL++ + H +PN+ +MLVGNK DL H AV E+G+ +A++ L F+E SA A NVE+AF + +I + + ++A D + +G+ D + ++ GCCS Sbjct: 10 YDYLFKVVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATRTLKVDGKVVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRRATFENVDRWLKELKNHTDPNIVVMLVGNKSDLRHLLAVPTEDGKSYAEQESLCFMETSALEATNVEDAFAEVLTQIYRITSKKQVEAGEDGN---ASVPKGEKIEVKNDVSALKKLGCCS 215
BLAST of DY258646 vs. ExPASy Swiss-Prot
Match: RAB1A_RAT (Ras-related protein Rab-1A OS=Rattus norvegicus GN=Rab1A PE=1 SV=3) HSP 1 Score: 194.897 bits (494), Expect = 5.455e-49 Identity = 97/208 (46.63%), Postives = 140/208 (67.31%), Query Frame = 2 Query: 155 YDYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMVTIDGRPIKLQIWDTAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLSSWLEDARQHANPNMSIMLVGNKCDLAHRRAVSKEEGEQFAKENGLLFLEASARTAQNVEEAFIKTAAKILQNIQEGALDAVNDQSGIKVGYGRGQGPSGARDGTVSQRGGCC 778 YDYLFK ++IGD+GVGKSCLLL+F D + + TIGV+F R + +DG+ IKLQIWDTAGQE FR+IT SYYRGA G ++VYD+T +E+FN++ WL++ ++A+ N++ +LVGNKCDL ++ V ++FA G+ FLE SA+ A NVE++F+ AA+I + + GA ++S +K+ Q + G GGCC Sbjct: 8 YDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTIKLQIWDTAGQERFRTITSSYYRGAHGIIVVYDVTDQESFNNVKQWLQEIDRYASENVNKLLVGNKCDLTTKKVVDYTTAKEFADSLGIPFLETSAKNATNVEQSFMTMAAEIKKRMGPGATAGGAEKSNVKI-----QSTPVKQSG-----GGCC 205
BLAST of DY258646 vs. ExPASy Swiss-Prot
Match: RAB1A_MOUSE (Ras-related protein Rab-1A OS=Mus musculus GN=Rab1A PE=1 SV=3) HSP 1 Score: 194.897 bits (494), Expect = 5.455e-49 Identity = 97/208 (46.63%), Postives = 140/208 (67.31%), Query Frame = 2 Query: 155 YDYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMVTIDGRPIKLQIWDTAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLSSWLEDARQHANPNMSIMLVGNKCDLAHRRAVSKEEGEQFAKENGLLFLEASARTAQNVEEAFIKTAAKILQNIQEGALDAVNDQSGIKVGYGRGQGPSGARDGTVSQRGGCC 778 YDYLFK ++IGD+GVGKSCLLL+F D + + TIGV+F R + +DG+ IKLQIWDTAGQE FR+IT SYYRGA G ++VYD+T +E+FN++ WL++ ++A+ N++ +LVGNKCDL ++ V ++FA G+ FLE SA+ A NVE++F+ AA+I + + GA ++S +K+ Q + G GGCC Sbjct: 8 YDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTIKLQIWDTAGQERFRTITSSYYRGAHGIIVVYDVTDQESFNNVKQWLQEIDRYASENVNKLLVGNKCDLTTKKVVDYTTAKEFADSLGIPFLETSAKNATNVEQSFMTMAAEIKKRMGPGATAGGAEKSNVKI-----QSTPVKQSG-----GGCC 205
BLAST of DY258646 vs. ExPASy Swiss-Prot
Match: RAB1A_HUMAN (Ras-related protein Rab-1A OS=Homo sapiens GN=RAB1A PE=1 SV=3) HSP 1 Score: 194.897 bits (494), Expect = 5.455e-49 Identity = 97/208 (46.63%), Postives = 140/208 (67.31%), Query Frame = 2 Query: 155 YDYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMVTIDGRPIKLQIWDTAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLSSWLEDARQHANPNMSIMLVGNKCDLAHRRAVSKEEGEQFAKENGLLFLEASARTAQNVEEAFIKTAAKILQNIQEGALDAVNDQSGIKVGYGRGQGPSGARDGTVSQRGGCC 778 YDYLFK ++IGD+GVGKSCLLL+F D + + TIGV+F R + +DG+ IKLQIWDTAGQE FR+IT SYYRGA G ++VYD+T +E+FN++ WL++ ++A+ N++ +LVGNKCDL ++ V ++FA G+ FLE SA+ A NVE++F+ AA+I + + GA ++S +K+ Q + G GGCC Sbjct: 8 YDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTIKLQIWDTAGQERFRTITSSYYRGAHGIIVVYDVTDQESFNNVKQWLQEIDRYASENVNKLLVGNKCDLTTKKVVDYTTAKEFADSLGIPFLETSAKNATNVEQSFMTMAAEIKKRMGPGATAGGAEKSNVKI-----QSTPVKQSG-----GGCC 205
BLAST of DY258646 vs. ExPASy Swiss-Prot
Match: RAB1A_CANFA (Ras-related protein Rab-1A OS=Canis familiaris GN=RAB1A PE=1 SV=3) HSP 1 Score: 194.897 bits (494), Expect = 5.455e-49 Identity = 97/208 (46.63%), Postives = 140/208 (67.31%), Query Frame = 2 Query: 155 YDYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMVTIDGRPIKLQIWDTAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLSSWLEDARQHANPNMSIMLVGNKCDLAHRRAVSKEEGEQFAKENGLLFLEASARTAQNVEEAFIKTAAKILQNIQEGALDAVNDQSGIKVGYGRGQGPSGARDGTVSQRGGCC 778 YDYLFK ++IGD+GVGKSCLLL+F D + + TIGV+F R + +DG+ IKLQIWDTAGQE FR+IT SYYRGA G ++VYD+T +E+FN++ WL++ ++A+ N++ +LVGNKCDL ++ V ++FA G+ FLE SA+ A NVE++F+ AA+I + + GA ++S +K+ Q + G GGCC Sbjct: 8 YDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTIKLQIWDTAGQERFRTITSSYYRGAHGIIVVYDVTDQESFNNVKQWLQEIDRYASENVNKLLVGNKCDLTTKKVVDYTTAKEFADSLGIPFLETSAKNATNVEQSFMTMAAEIKKRMGPGATAGGAEKSNVKI-----QSTPVKQSG-----GGCC 205
BLAST of DY258646 vs. ExPASy Swiss-Prot
Match: YPT3_NICPL (Ras-related protein YPT3 OS=Nicotiana plumbaginifolia GN=YPT3 PE=2 SV=1) HSP 1 Score: 193.741 bits (491), Expect = 1.215e-48 Identity = 97/209 (46.41%), Postives = 137/209 (65.55%), Query Frame = 2 Query: 155 YDYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMVTIDGRPIKLQIWDTAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLSSWLEDARQHANPNMSIMLVGNKCDLAHRRAVSKEEGEQFAKENGLLFLEASARTAQNVEEAFIKTAAKILQNIQEGALDAVNDQSGIKVGYGRGQGPSGARDGTVSQRGGCCS 781 YDYLFK ++IGD+GVGKS LL +FT F TIGVEF + + ID + IK QIWDTAGQE +R+IT +YYRGA GALLVYD+TR T+ +++ WL++ R H +PN+ +ML+GNK DL H AVS +E + A+ GL F+E SA A NVE AF + +I + + + A++A D+ +G+ + +G+ ++ GCCS Sbjct: 10 YDYLFKLVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATKSLNIDNKVIKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTYENVTRWLKELRDHTDPNIVVMLIGNKSDLRHLVAVSTDEAKGLAEREGLYFMETSALEATNVENAFTEALTQIYRIVSKKAVEA-GDEGATSSAPPKGETINIKDEGSSWKKFGCCS 217 The following BLAST results are available for this feature:
BLAST of DY258646 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >DY258646 ID=DY258646; Name=DY258646; organism=Citrus clementina; type=EST; length=916bpback to top |