DY258646

Overview
NameDY258646
Unique NameDY258646
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length916
Libraries
Library NameType
AbsDev1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of DY258646 vs. ExPASy Swiss-Prot
Match: RSR1_YEAST (Ras-related protein RSR1 OS=Saccharomyces cerevisiae GN=RSR1 PE=1 SV=1)

HSP 1 Score: 99.3673 bits (246), Expect = 3.119e-20
Identity = 62/192 (32.29%), Postives = 99/192 (51.56%), Query Frame = 2
Query:  167 FKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMVTIDGRPIKLQIWDTAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLSSWLEDA-RQHANPNMSIMLVGNKCDLAHRRAVSKEEGEQFAKENGLL-FLEASARTAQNVEEAFIKTAAKILQNIQEGALDAVNDQSGIKVGYGRGQGPS 736
            +K +++G  GVGKSCL +QF    +   +D TI   +  + + ID +   L+I DTAG   F ++   Y +   G LLVY +T R++   L    E   R   +  + ++L+GNK DL + R +S EEG + + + G + F E SA    NV+E F+    +I++N  E    AV D       + + + PS
Sbjct:    4 YKLVVLGAGGVGKSCLTVQFVQGVYLDTYDPTIEDSY-RKTIEIDNKVFDLEILDTAGIAQFTAMRELYIKSGMGFLLVYSVTDRQSLEELMELREQVLRIKDSDRVPMVLIGNKADLINERVISVEEGIEVSSKWGRVPFYETSALLRSNVDEVFVDLVRQIIRNEMESV--AVKDARNQSQQFSKIESPS 192          
BLAST of DY258646 vs. ExPASy Swiss-Prot
Match: RASU_DICDI (Ras-like protein rasU OS=Dictyostelium discoideum GN=rasU PE=3 SV=1)

HSP 1 Score: 99.3673 bits (246), Expect = 3.119e-20
Identity = 52/154 (33.77%), Postives = 86/154 (55.84%), Query Frame = 2
Query:  179 IIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMVTIDGRPIKLQIWDTAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLSSWLEDARQHANPNMSIMLVGNKCDLAHRRAVSKEEGEQFAKENGLLFLEASARTAQNVEEAFIKTA 640
            ++GD GVGK+ + +QF    F   +D TI  +   +   ID +   L I DTAGQ+   +I   + +   G +LVY +T R +F+ + S+L+  +   +  + I+++ NK DL   R V+ +EGE FA   G+ F+E SA+   N++E F + A
Sbjct:   19 VMGDGGVGKTSITIQFISNHFVNCYDPTIE-DLYRKQCLIDDQVYMLDILDTAGQDELNAIRNHWIKSCEGFILVYSVTSRSSFDQIQSFLDQIKFLKSEKVPIIMIANKSDLDDERQVTYQEGENFANRFGMSFMEVSAKYKLNIDEVFNQIA 171          
BLAST of DY258646 vs. ExPASy Swiss-Prot
Match: RASN_CHICK (GTPase NRas OS=Gallus gallus GN=NRAS PE=2 SV=1)

HSP 1 Score: 99.3673 bits (246), Expect = 3.119e-20
Identity = 59/164 (35.98%), Postives = 90/164 (54.88%), Query Frame = 2
Query:  167 FKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMVTIDGRPIKLQIWDTAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLSSWLED-ARQHANPNMSIMLVGNKCDLAHRRAVSKEEGEQFAKENGLLFLEASARTAQNVEEAFIKTAAKILQ 655
            +K +++G  GVGKS L +Q     F   +D TI   +  + V IDG    L I DTAGQE + ++   Y R   G L V+ I   ++F  ++ + E   R   + ++ ++LVGNKCDL   R V  ++ ++ AK  G+ F+E SA+T Q VE+AF     +I Q
Sbjct:    4 YKLVVVGAGGVGKSALTIQLIQNHFVDEYDPTIEDSY-RKQVVIDGETCLLDILDTAGQEEYSAMRDQYMRTGEGFLCVFAINNSKSFADINLYREQIKRVKDSDDVPMVLVGNKCDLP-TRTVDTKQAQELAKSYGIPFIETSAKTRQGVEDAFYTLVREIRQ 165          
BLAST of DY258646 vs. ExPASy Swiss-Prot
Match: RASH_HUMAN (GTPase HRas OS=Homo sapiens GN=HRAS PE=1 SV=1)

HSP 1 Score: 99.3673 bits (246), Expect = 3.119e-20
Identity = 58/165 (35.15%), Postives = 89/165 (53.94%), Query Frame = 2
Query:  167 FKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMVTIDGRPIKLQIWDTAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLSSWLED-ARQHANPNMSIMLVGNKCDLAHRRAVSKEEGEQFAKENGLLFLEASARTAQNVEEAFIKTAAKILQN 658
            +K +++G  GVGKS L +Q     F   +D TI   +  + V IDG    L I DTAGQE + ++   Y R   G L V+ I   ++F  +  + E   R   + ++ ++LVGNKCDLA  R V   + +  A+  G+ ++E SA+T Q VE+AF     +I Q+
Sbjct:    4 YKLVVVGAGGVGKSALTIQLIQNHFVDEYDPTIEDSY-RKQVVIDGETCLLDILDTAGQEEYSAMRDQYMRTGEGFLCVFAINNTKSFEDIHQYREQIKRVKDSDDVPMVLVGNKCDLA-ARTVESRQAQDLARSYGIPYIETSAKTRQGVEDAFYTLVREIRQH 166          
BLAST of DY258646 vs. ExPASy Swiss-Prot
Match: RSR1_CANAL (Ras-related protein RSR1 OS=Candida albicans GN=RSR1 PE=3 SV=1)

HSP 1 Score: 98.9821 bits (245), Expect = 4.074e-20
Identity = 62/178 (34.83%), Postives = 98/178 (55.06%), Query Frame = 2
Query:  167 FKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMVTIDGRPIKLQIWDTAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLSSWLEDA-RQHANPNMSIMLVGNKCDLAHRRAVSKEEGEQFAKENGLL-FLEASARTAQNVEEAFIKTAAKILQNIQEGALDAVNDQ 694
            +K +++G  GVGKS + +QF    +   +D TI   +  + + +DGR   L+I DTAG   F ++   Y +   G LLVY +T   +   L +  E   R   + N+ ++LVGNKCDL   R +S E+G + +++ GL+ F E SA    NV+EAFI    +I++  +E A+ A   Q
Sbjct:    4 YKVVVLGAGGVGKSSITVQFVQGVYVESYDPTIEDSY-RKQIEVDGRACDLEILDTAGVAQFTAMRELYIKSGKGFLLVYSVTDENSLKELLALREQVLRIKDSDNVPMVLVGNKCDLEDDRVLSIEDGVKVSQDWGLVPFYETSAMYKTNVDEAFIDVVRQIMR--KEAAISAEKKQ 178          
BLAST of DY258646 vs. ExPASy Swiss-Prot
Match: RASN_XENLA (GTPase NRas OS=Xenopus laevis GN=nras PE=2 SV=1)

HSP 1 Score: 98.9821 bits (245), Expect = 4.074e-20
Identity = 58/164 (35.37%), Postives = 91/164 (55.49%), Query Frame = 2
Query:  167 FKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMVTIDGRPIKLQIWDTAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLSSWLED-ARQHANPNMSIMLVGNKCDLAHRRAVSKEEGEQFAKENGLLFLEASARTAQNVEEAFIKTAAKILQ 655
            +K +++G  GVGKS L +Q     F   +D TI   +  + V IDG    L I DTAGQE + ++   Y R   G L V+ I   ++F  ++++ E   R   + ++ ++LVGNKCDL   R V  ++ ++ A+  G+ F+E SA+T Q VE+AF     +I Q
Sbjct:    4 YKLVVVGAGGVGKSALTIQLIQNHFVDEYDPTIEDSY-RKQVVIDGETCLLDILDTAGQEEYSAMRDQYMRTGEGFLCVFAINNSKSFADINAYREQIKRVKDSDDVPMVLVGNKCDLP-SRTVDTKQAQELARSYGIPFIETSAKTRQGVEDAFYTLVREIHQ 165          
BLAST of DY258646 vs. ExPASy Swiss-Prot
Match: RASN_PONAB (GTPase NRas OS=Pongo abelii GN=NRAS PE=2 SV=1)

HSP 1 Score: 98.9821 bits (245), Expect = 4.074e-20
Identity = 59/164 (35.98%), Postives = 89/164 (54.27%), Query Frame = 2
Query:  167 FKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMVTIDGRPIKLQIWDTAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLSSWLED-ARQHANPNMSIMLVGNKCDLAHRRAVSKEEGEQFAKENGLLFLEASARTAQNVEEAFIKTAAKILQ 655
            +K +++G  GVGKS L +Q     F   +D TI   +  + V IDG    L I DTAGQE + ++   Y R   G L V+ I   ++F  ++ + E   R   + ++ ++LVGNKCDL   R V  ++  + AK  G+ F+E SA+T Q VE+AF     +I Q
Sbjct:    4 YKLVVVGAGGVGKSALTIQLIQNHFVDEYDPTIEDSY-RKQVVIDGETCLLDILDTAGQEEYSAMRDQYMRTGEGLLCVFAINNSKSFADINLYREQIKRVKDSDDVPMVLVGNKCDLP-TRTVDTKQAHELAKSYGIPFIETSAKTRQGVEDAFYTLVREIRQ 165          
BLAST of DY258646 vs. ExPASy Swiss-Prot
Match: RASN_RAT (GTPase NRas OS=Rattus norvegicus GN=Nras PE=2 SV=1)

HSP 1 Score: 98.5969 bits (244), Expect = 5.321e-20
Identity = 59/164 (35.98%), Postives = 89/164 (54.27%), Query Frame = 2
Query:  167 FKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMVTIDGRPIKLQIWDTAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLSSWLED-ARQHANPNMSIMLVGNKCDLAHRRAVSKEEGEQFAKENGLLFLEASARTAQNVEEAFIKTAAKILQ 655
            +K +++G  GVGKS L +Q     F   +D TI   +  + V IDG    L I DTAGQE + ++   Y R   G L V+ I   ++F  ++ + E   R   + ++ ++LVGNKCDL   R V  ++  + AK  G+ F+E SA+T Q VE+AF     +I Q
Sbjct:    4 YKLVVVGAGGVGKSALTIQLIQNHFVDEYDPTIEDSY-RKQVVIDGETCLLDILDTAGQEEYSAMRDQYMRTGEGFLCVFAINNSKSFADINLYREQIKRVKDSDDVPMVLVGNKCDLP-TRTVDTKQAHELAKSYGIPFIETSAKTRQGVEDAFYTLVREIRQ 165          
BLAST of DY258646 vs. ExPASy Swiss-Prot
Match: RASN_PIG (GTPase NRas OS=Sus scrofa GN=NRAS PE=2 SV=1)

HSP 1 Score: 98.5969 bits (244), Expect = 5.321e-20
Identity = 59/164 (35.98%), Postives = 89/164 (54.27%), Query Frame = 2
Query:  167 FKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMVTIDGRPIKLQIWDTAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLSSWLED-ARQHANPNMSIMLVGNKCDLAHRRAVSKEEGEQFAKENGLLFLEASARTAQNVEEAFIKTAAKILQ 655
            +K +++G  GVGKS L +Q     F   +D TI   +  + V IDG    L I DTAGQE + ++   Y R   G L V+ I   ++F  ++ + E   R   + ++ ++LVGNKCDL   R V  ++  + AK  G+ F+E SA+T Q VE+AF     +I Q
Sbjct:    4 YKLVVVGAGGVGKSALTIQLIQNHFVDEYDPTIEDSY-RKQVVIDGETCLLDILDTAGQEEYSAMRDQYMRTGEGFLCVFAINNSKSFADINLYREQIKRVKDSDDVPMVLVGNKCDLP-TRTVDTKQAHELAKSYGIPFIETSAKTRQGVEDAFYTLVREIRQ 165          
BLAST of DY258646 vs. ExPASy Swiss-Prot
Match: RASN_MOUSE (GTPase NRas OS=Mus musculus GN=Nras PE=2 SV=1)

HSP 1 Score: 98.5969 bits (244), Expect = 5.321e-20
Identity = 59/164 (35.98%), Postives = 89/164 (54.27%), Query Frame = 2
Query:  167 FKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMVTIDGRPIKLQIWDTAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLSSWLED-ARQHANPNMSIMLVGNKCDLAHRRAVSKEEGEQFAKENGLLFLEASARTAQNVEEAFIKTAAKILQ 655
            +K +++G  GVGKS L +Q     F   +D TI   +  + V IDG    L I DTAGQE + ++   Y R   G L V+ I   ++F  ++ + E   R   + ++ ++LVGNKCDL   R V  ++  + AK  G+ F+E SA+T Q VE+AF     +I Q
Sbjct:    4 YKLVVVGAGGVGKSALTIQLIQNHFVDEYDPTIEDSY-RKQVVIDGETCLLDILDTAGQEEYSAMRDQYMRTGEGFLCVFAINNSKSFADINLYREQIKRVKDSDDVPMVLVGNKCDLP-TRTVDTKQAHELAKSYGIPFIETSAKTRQGVEDAFYTLVREIRQ 165          
The following BLAST results are available for this feature:
BLAST of DY258646 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
RSR1_YEAST3.119e-2032.29Ras-related protein RSR1 OS=Saccharomyces cerevisi... [more]
RASU_DICDI3.119e-2033.77Ras-like protein rasU OS=Dictyostelium discoideum ... [more]
RASN_CHICK3.119e-2035.98GTPase NRas OS=Gallus gallus GN=NRAS PE=2 SV=1[more]
RASH_HUMAN3.119e-2035.15GTPase HRas OS=Homo sapiens GN=HRAS PE=1 SV=1[more]
RSR1_CANAL4.074e-2034.83Ras-related protein RSR1 OS=Candida albicans GN=RS... [more]
RASN_XENLA4.074e-2035.37GTPase NRas OS=Xenopus laevis GN=nras PE=2 SV=1[more]
RASN_PONAB4.074e-2035.98GTPase NRas OS=Pongo abelii GN=NRAS PE=2 SV=1[more]
RASN_RAT5.321e-2035.98GTPase NRas OS=Rattus norvegicus GN=Nras PE=2 SV=1[more]
RASN_PIG5.321e-2035.98GTPase NRas OS=Sus scrofa GN=NRAS PE=2 SV=1[more]
RASN_MOUSE5.321e-2035.98GTPase NRas OS=Mus musculus GN=Nras PE=2 SV=1[more]

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Properties
Property NameValue
Genbank descriptionKN0AAI2DC01FM1 AbsDev1 Citrus clementina cDNA 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DY258646 ID=DY258646; Name=DY258646; organism=Citrus clementina; type=EST; length=916bp
CGACGTATAATAAGCATATCAGCAGCAGGCAGCGGCGTCTTCTTCGTCTT
TTATTGTTGTTGAGTTGAGTTGAGTTGAGTTGAGTTGAGTTGAGTTGAGT
TGAGTTGAGAGACAGAGTTCATCTAAAAGAAACAACAGCAACAACAACAT
GTCGTACGATTATCTGTTCAAGTACATAATCATCGGAGACACTGGAGTAG
GGAAATCATGCTTGCTATTGCAATTCACGGACAAGAGGTTTCAGCCCGTT
CATGATTTGACCATCGGCGTTGAATTCGGTGCTCGCATGGTCACCATCGA
TGGTCGCCCCATCAAGCTCCAGATTTGGGACACCGCTGGCCAAGAATCTT
TCAGATCTATCACAAGATCTTATTACAGAGGAGCGGCTGGGGCACTTCTG
GTTTATGATATTACAAGGAGAGAGACATTTAATCATCTATCAAGCTGGCT
GGAGGATGCGCGGCAGCATGCTAATCCCAACATGTCAATCATGCTCGTTG
GTAACAAGTGTGATCTTGCTCATCGGAGGGCTGTTAGCAAGGAGGAAGGC
GAACAGTTTGCAAAGGAGAATGGGCTTCTGTTTCTGGAAGCATCTGCAAG
AACAGCTCAGAATGTTGAGGAGGCTTTTATAAAGACTGCTGCAAAGATCC
TTCAAAATATTCAGGAAGGAGCACTTGATGCAGTAAATGATCAGTCTGGA
ATTAAGGTTGGGTACGGACGCGGCCAAGGACCATCAGGTGCAAGAGATGG
AACCGTTTCACAGAGAGGTGGATGTTGCAGTTAAATTCATACGAATGTGG
ATTCTGTATTTCATCCCTTTCAGCCATTTATATAGGCCTTACCCCTAACT
TGGATATATCAGTCCAGTATTGTCACGCAAAAACCTGTGAGGGATATGAA
TGTAAAGATCTTATCT
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