DY258646

Overview
NameDY258646
Unique NameDY258646
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length916
Libraries
Library NameType
AbsDev1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of DY258646 vs. ExPASy Swiss-Prot
Match: RASK_HUMAN (GTPase KRas OS=Homo sapiens GN=KRAS PE=1 SV=1)

HSP 1 Score: 97.8265 bits (242), Expect = 9.076e-20
Identity = 58/164 (35.37%), Postives = 88/164 (53.66%), Query Frame = 2
Query:  167 FKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMVTIDGRPIKLQIWDTAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLSSWLED-ARQHANPNMSIMLVGNKCDLAHRRAVSKEEGEQFAKENGLLFLEASARTAQNVEEAFIKTAAKILQ 655
            +K +++G  GVGKS L +Q     F   +D TI   +  + V IDG    L I DTAGQE + ++   Y R   G L V+ I   ++F  +  + E   R   + ++ ++LVGNKCDL   R V  ++ +  A+  G+ F+E SA+T Q VE+AF     +I Q
Sbjct:    4 YKLVVVGAGGVGKSALTIQLIQNHFVDEYDPTIEDSY-RKQVVIDGETCLLDILDTAGQEEYSAMRDQYMRTGEGFLCVFAINNTKSFEDIHHYREQIKRVKDSEDVPMVLVGNKCDLP-SRTVDTKQAQDLARSYGIPFIETSAKTRQRVEDAFYTLVREIRQ 165          
BLAST of DY258646 vs. ExPASy Swiss-Prot
Match: RASH_MSVHA (Transforming protein p29 OS=Harvey murine sarcoma virus GN=H-RAS PE=1 SV=1)

HSP 1 Score: 97.8265 bits (242), Expect = 9.076e-20
Identity = 57/165 (34.55%), Postives = 88/165 (53.33%), Query Frame = 2
Query:  167 FKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMVTIDGRPIKLQIWDTAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLSSWLED-ARQHANPNMSIMLVGNKCDLAHRRAVSKEEGEQFAKENGLLFLEASARTAQNVEEAFIKTAAKILQN 658
            +K +++G  GVGKS L +Q     F   +D TI   +  + V IDG    L I DT GQE + ++   Y R   G L V+ I   ++F  +  + E   R   + ++ ++LVGNKCDLA  R V   + +  A+  G+ ++E SA+T Q VE+AF     +I Q+
Sbjct:   56 YKLVVVGARGVGKSALTIQLIQNHFVDEYDPTIEDSY-RKQVVIDGETCLLDILDTTGQEEYSAMRDQYMRTGEGFLCVFAINNTKSFEDIHQYREQIKRVKDSDDVPMVLVGNKCDLA-GRTVESRQAQDLARSYGIPYIETSAKTRQGVEDAFYTLVREIRQH 218          
BLAST of DY258646 vs. ExPASy Swiss-Prot
Match: RABT2_DICDI (Ras-related protein RabT2 OS=Dictyostelium discoideum GN=rabT2 PE=3 SV=1)

HSP 1 Score: 97.8265 bits (242), Expect = 9.076e-20
Identity = 58/162 (35.80%), Postives = 94/162 (58.02%), Query Frame = 2
Query:  158 DY-LFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMVTI-DGRPIKLQIWDTAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLSSWLEDA--RQHANPNMSIMLVGNKCDLAHRRAVSKEEGEQFAKENGLL-FLEASARTAQNVEEAF 628
            DY L K +++GD   GK  +L ++    F+ +   +IGV+F  R   I +G+  K+QIWD    E FRSIT++YYRGA G +L+YD T +E+FN+L  W+ +   +   + N +I+++GNKCDL +   +   + + F     +  F   SA+ + N+ E F
Sbjct:   22 DYELIKVLMLGDYKTGKGSVLRRYHYNEFE-LGVSSIGVDFVIRDYGIVNGKYYKIQIWDANSCERFRSITQAYYRGAHGFMLLYDCTNQESFNNLQFWINEIINKSPNSNNSTIVIIGNKCDLVNDIKIDPIKSKLFCDSKSITSFQNVSAKDSININEPF 182          
BLAST of DY258646 vs. ExPASy Swiss-Prot
Match: RASM_RAT (Ras-related protein M-Ras OS=Rattus norvegicus GN=Mras PE=2 SV=2)

HSP 1 Score: 97.4413 bits (241), Expect = 1.185e-19
Identity = 57/169 (33.73%), Postives = 93/169 (55.03%), Query Frame = 2
Query:  167 FKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMVTIDGRPIKLQIWDTAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLSSWLE-DARQHANPNMSIMLVGNKCDLAHRRAVSKEEGEQFAKENGLLFLEASARTAQ-NVEEAFIKTAAKILQNIQE 667
            +K +++GD GVGKS L +QF  K F P +D TI   +  +   ID +   L + DTAGQE F ++   Y R   G L+VY +T + +F H+  + +   R     +  ++LV NK DL H R V++++G++ A +  + ++E SA+    NV++ F      I Q + E
Sbjct:   14 YKLVVVGDGGVGKSALTIQFFQKIFVPDYDPTIEDSY-LKHTEIDNQWAILDVLDTAGQEEFSAMREQYMRTGDGFLIVYSVTDKASFEHVDRFHQLILRVKDRESFPMILVANKVDLMHLRKVTRDQGKEMATKYNIPYIETSAKDPPLNVDKTFHDLVRVIRQQVPE 181          
BLAST of DY258646 vs. ExPASy Swiss-Prot
Match: RASM_MOUSE (Ras-related protein M-Ras OS=Mus musculus GN=Mras PE=1 SV=1)

HSP 1 Score: 97.4413 bits (241), Expect = 1.185e-19
Identity = 57/169 (33.73%), Postives = 93/169 (55.03%), Query Frame = 2
Query:  167 FKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMVTIDGRPIKLQIWDTAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLSSWLE-DARQHANPNMSIMLVGNKCDLAHRRAVSKEEGEQFAKENGLLFLEASARTAQ-NVEEAFIKTAAKILQNIQE 667
            +K +++GD GVGKS L +QF  K F P +D TI   +  +   ID +   L + DTAGQE F ++   Y R   G L+VY +T + +F H+  + +   R     +  ++LV NK DL H R V++++G++ A +  + ++E SA+    NV++ F      I Q + E
Sbjct:   14 YKLVVVGDGGVGKSALTIQFFQKIFVPDYDPTIEDSY-LKHTEIDNQWAILDVLDTAGQEEFSAMREQYMRTGDGFLIVYSVTDKASFEHVDRFHQLILRVKDRESFPMILVANKVDLMHLRKVTRDQGKEMATKYNIPYIETSAKDPPLNVDKTFHDLVRVIRQQVPE 181          
BLAST of DY258646 vs. ExPASy Swiss-Prot
Match: RASH_MOUSE (GTPase HRas OS=Mus musculus GN=Hras1 PE=1 SV=1)

HSP 1 Score: 97.4413 bits (241), Expect = 1.185e-19
Identity = 57/165 (34.55%), Postives = 88/165 (53.33%), Query Frame = 2
Query:  167 FKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMVTIDGRPIKLQIWDTAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLSSWLED-ARQHANPNMSIMLVGNKCDLAHRRAVSKEEGEQFAKENGLLFLEASARTAQNVEEAFIKTAAKILQN 658
            +K +++G  GVGKS L +Q     F   +D TI   +  + V IDG    L   DTAGQE + ++   Y R   G L V+ I   ++F  +  + E   R   + ++ ++LVGNKCDLA  R V   + +  A+  G+ ++E SA+T Q VE+AF     +I Q+
Sbjct:    4 YKLVVVGAGGVGKSALTIQLIQNHFVDEYDPTIEDSY-RKQVVIDGETCLLDYLDTAGQEEYSAMRDQYMRTGEGFLCVFAINNTKSFEDIHQYREQIKRVKDSDDVPMVLVGNKCDLA-ARTVESRQAQDLARSYGIPYIETSAKTRQGVEDAFYTLVREIRQH 166          
BLAST of DY258646 vs. ExPASy Swiss-Prot
Match: RAS2_DROME (Ras-like protein 2 OS=Drosophila melanogaster GN=Ras64B PE=1 SV=2)

HSP 1 Score: 97.4413 bits (241), Expect = 1.185e-19
Identity = 53/155 (34.19%), Postives = 84/155 (54.19%), Query Frame = 2
Query:  167 FKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMVTIDGRPIKLQIWDTAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLSSWLEDA-RQHANPNMSIMLVGNKCDLAHRRAVSKEEGEQFAKENGLLFLEASARTAQNVEEAF 628
            +K +++G  GVGKS + +QF    F   +D TI   +  +   ID  P KL I DTAGQE F ++   Y R   G LLV+ +    +F+ +  +     R        +++VGNKCDL H++ VS EE +  ++   + ++E SA+   NV++AF
Sbjct:    6 YKLVVVGGGGVGKSAITIQFIQSYFVTDYDPTIEDSY-TKQCNIDDVPAKLDILDTAGQEEFSAMREQYMRSGEGFLLVFALNDHSSFDEIPKFQRQILRVKDRDEFPMLMVGNKCDLKHQQQVSLEEAQNTSRNLMIPYIECSAKLRVNVDQAF 159          
BLAST of DY258646 vs. ExPASy Swiss-Prot
Match: RAC7_ARATH (Rac-like GTP-binding protein ARAC7 OS=Arabidopsis thaliana GN=ARAC7 PE=1 SV=1)

HSP 1 Score: 97.4413 bits (241), Expect = 1.185e-19
Identity = 58/171 (33.92%), Postives = 96/171 (56.14%), Query Frame = 2
Query:  170 KYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMVTIDGRPIKLQIWDTAGQESFRSITRSYYRGAAGALLVYDITRRETF-NHLSSWLEDARQHANPNMSIMLVGNKCDLA--------HRRAVSKEEGEQFAKENG-LLFLEASARTAQNVEEAFIKTAAKIL 652
            K + +GD  VGK+C+L+ +T  +F   +  T+   F A  V +DG+ + L +WDTAGQE +  +    YRGA   +L + +  + ++ N L  W+ + R+ A PN+ I+LVG K DL         H   ++  +GE+  K+ G   ++E S++T QNV+  F  TA K++
Sbjct:    8 KCVTVGDGAVGKTCMLICYTSNKFPTDYIPTVFDNFSAN-VAVDGQIVNLGLWDTAGQEDYSRLRPLSYRGADIFVLAFSLISKASYENVLKKWMPELRRFA-PNVPIVLVGTKLDLRDDKGYLADHTNVITSTQGEELRKQIGAAAYIECSSKTQQNVKAVF-DTAIKVV 175          
BLAST of DY258646 vs. ExPASy Swiss-Prot
Match: RAC2_ORYSJ (Rac-like GTP-binding protein 2 OS=Oryza sativa subsp. japonica GN=RAC2 PE=2 SV=1)

HSP 1 Score: 97.4413 bits (241), Expect = 1.185e-19
Identity = 59/173 (34.10%), Postives = 97/173 (56.07%), Query Frame = 2
Query:  170 KYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMVTIDGRPIKLQIWDTAGQESFRSITRSYYRGAAGALLVYDITRRETF-NHLSSWLEDARQHANPNMSIMLVGNKCDLAHRR----------AVSKEEGEQFAKENG-LLFLEASARTAQNVEEAFIKTAAKIL 652
            K + +GD  VGK+C+L+ +T  +F   +  T+   F A  V++DG  + L +WDTAGQE +  +    YRGA   +L + +  R ++ N L  W+ + R+ A PN+ I+LVG K DL   R          A++  +GE+  K+ G   ++E S++T QN++  F  TA K++
Sbjct:    9 KCVTVGDGAVGKTCMLICYTSNKFPTDYIPTVFDNFSAN-VSVDGNIVNLGLWDTAGQEDYSRLRPLSYRGADIFVLAFSLISRASYENVLKKWMPELRRFA-PNVPIVLVGTKLDLRDHRSYLADHPAASAITTAQGEELRKQIGAAAYIECSSKTQQNIKAVF-DTAIKVV 178          
BLAST of DY258646 vs. ExPASy Swiss-Prot
Match: RIT2_MOUSE (GTP-binding protein Rit2 OS=Mus musculus GN=Rit2 PE=1 SV=1)

HSP 1 Score: 97.0561 bits (240), Expect = 1.548e-19
Identity = 56/155 (36.13%), Postives = 83/155 (53.55%), Query Frame = 2
Query:  167 FKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMVTIDGRPIKLQIWDTAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLSSWLEDARQHANP-NMSIMLVGNKCDLAHRRAVSKEEGEQFAKENGLLFLEASARTAQNVEEAF 628
            +K +++G  GVGKS + +QF   +F   HD TI   +  + V ID  P  L I DTAGQ  F ++   Y RG  G ++ Y +T R++F   + + E   Q  +   + ++LVGNK DL   R VS EEG   A++    F E SA     +++AF
Sbjct:   21 YKVVMLGAGGVGKSAVTMQFISHQFPDYHDPTIEDAYKTQ-VRIDNEPAYLDILDTAGQAEFTAMREQYMRGGEGFIICYSVTDRQSFQEAAKFKELIFQVRHTYEIPLVLVGNKIDLEQFRQVSTEEGMNLARDYNCAFFETSAALRFGIDDAF 174          
The following BLAST results are available for this feature:
BLAST of DY258646 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
RASK_HUMAN9.076e-2035.37GTPase KRas OS=Homo sapiens GN=KRAS PE=1 SV=1[more]
RASH_MSVHA9.076e-2034.55Transforming protein p29 OS=Harvey murine sarcoma ... [more]
RABT2_DICDI9.076e-2035.80Ras-related protein RabT2 OS=Dictyostelium discoid... [more]
RASM_RAT1.185e-1933.73Ras-related protein M-Ras OS=Rattus norvegicus GN=... [more]
RASM_MOUSE1.185e-1933.73Ras-related protein M-Ras OS=Mus musculus GN=Mras ... [more]
RASH_MOUSE1.185e-1934.55GTPase HRas OS=Mus musculus GN=Hras1 PE=1 SV=1[more]
RAS2_DROME1.185e-1934.19Ras-like protein 2 OS=Drosophila melanogaster GN=R... [more]
RAC7_ARATH1.185e-1933.92Rac-like GTP-binding protein ARAC7 OS=Arabidopsis ... [more]
RAC2_ORYSJ1.185e-1934.10Rac-like GTP-binding protein 2 OS=Oryza sativa sub... [more]
RIT2_MOUSE1.548e-1936.13GTP-binding protein Rit2 OS=Mus musculus GN=Rit2 P... [more]

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Properties
Property NameValue
Genbank descriptionKN0AAI2DC01FM1 AbsDev1 Citrus clementina cDNA 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DY258646 ID=DY258646; Name=DY258646; organism=Citrus clementina; type=EST; length=916bp
CGACGTATAATAAGCATATCAGCAGCAGGCAGCGGCGTCTTCTTCGTCTT
TTATTGTTGTTGAGTTGAGTTGAGTTGAGTTGAGTTGAGTTGAGTTGAGT
TGAGTTGAGAGACAGAGTTCATCTAAAAGAAACAACAGCAACAACAACAT
GTCGTACGATTATCTGTTCAAGTACATAATCATCGGAGACACTGGAGTAG
GGAAATCATGCTTGCTATTGCAATTCACGGACAAGAGGTTTCAGCCCGTT
CATGATTTGACCATCGGCGTTGAATTCGGTGCTCGCATGGTCACCATCGA
TGGTCGCCCCATCAAGCTCCAGATTTGGGACACCGCTGGCCAAGAATCTT
TCAGATCTATCACAAGATCTTATTACAGAGGAGCGGCTGGGGCACTTCTG
GTTTATGATATTACAAGGAGAGAGACATTTAATCATCTATCAAGCTGGCT
GGAGGATGCGCGGCAGCATGCTAATCCCAACATGTCAATCATGCTCGTTG
GTAACAAGTGTGATCTTGCTCATCGGAGGGCTGTTAGCAAGGAGGAAGGC
GAACAGTTTGCAAAGGAGAATGGGCTTCTGTTTCTGGAAGCATCTGCAAG
AACAGCTCAGAATGTTGAGGAGGCTTTTATAAAGACTGCTGCAAAGATCC
TTCAAAATATTCAGGAAGGAGCACTTGATGCAGTAAATGATCAGTCTGGA
ATTAAGGTTGGGTACGGACGCGGCCAAGGACCATCAGGTGCAAGAGATGG
AACCGTTTCACAGAGAGGTGGATGTTGCAGTTAAATTCATACGAATGTGG
ATTCTGTATTTCATCCCTTTCAGCCATTTATATAGGCCTTACCCCTAACT
TGGATATATCAGTCCAGTATTGTCACGCAAAAACCTGTGAGGGATATGAA
TGTAAAGATCTTATCT
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