DY258646

Overview
NameDY258646
Unique NameDY258646
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length916
Libraries
Library NameType
AbsDev1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of DY258646 vs. ExPASy Swiss-Prot
Match: RIT1_MOUSE (GTP-binding protein Rit1 OS=Mus musculus GN=Rit1 PE=1 SV=1)

HSP 1 Score: 97.0561 bits (240), Expect = 1.548e-19
Identity = 59/168 (35.12%), Postives = 86/168 (51.19%), Query Frame = 2
Query:  167 FKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMVTIDGRPIKLQIWDTAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLSSWLEDA-RQHANPNMSIMLVGNKCDLAHRRAVSKEEGEQFAKENGLLFLEASARTAQNVEEAFIKTAAKILQNIQE 667
            +K +++G  GVGKS + +QF   RF   HD TI   +  R + ID  P  L I DTAGQ  F ++   Y R   G ++ Y IT R +F+ +  + +   R     +  ++LVGNK DL   R VSKEEG   A+E    F E SA     +++ F     +I +  +E
Sbjct:   22 YKLVMLGAGGVGKSAMTMQFISHRFPEDHDPTIEDAYKIR-IRIDDEPANLDILDTAGQAEFTAMRDQYMRAGEGFIICYSITDRRSFHEVREFKQLIYRVRRTDDTPVVLVGNKSDLKQLRQVSKEEGLSLAREFSCPFFETSAAYRYYIDDVFHALVREIRKKEKE 188          
BLAST of DY258646 vs. ExPASy Swiss-Prot
Match: RIT1_HUMAN (GTP-binding protein Rit1 OS=Homo sapiens GN=RIT1 PE=1 SV=1)

HSP 1 Score: 97.0561 bits (240), Expect = 1.548e-19
Identity = 59/171 (34.50%), Postives = 87/171 (50.88%), Query Frame = 2
Query:  167 FKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMVTIDGRPIKLQIWDTAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLSSWLEDA-RQHANPNMSIMLVGNKCDLAHRRAVSKEEGEQFAKENGLLFLEASARTAQNVEEAFIKTAAKILQNIQEGAL 676
            +K +++G  GVGKS + +QF   RF   HD TI   +  R + ID  P  L I DTAGQ  F ++   Y R   G ++ Y IT R +F+ +  + +   R     +  ++LVGNK DL   R V+KEEG   A+E    F E SA     +++ F     +I +  +E  L
Sbjct:   22 YKLVMLGAGGVGKSAMTMQFISHRFPEDHDPTIEDAYKIR-IRIDDEPANLDILDTAGQAEFTAMRDQYMRAGEGFIICYSITDRRSFHEVREFKQLIYRVRRTDDTPVVLVGNKSDLKQLRQVTKEEGLALAREFSCPFFETSAAYRYYIDDVFHALVREIRRKEKEAVL 191          
BLAST of DY258646 vs. ExPASy Swiss-Prot
Match: RASZ_DICDI (Ras-like protein rasZ OS=Dictyostelium discoideum GN=rasZ PE=3 SV=1)

HSP 1 Score: 97.0561 bits (240), Expect = 1.548e-19
Identity = 57/163 (34.97%), Postives = 90/163 (55.21%), Query Frame = 2
Query:  164 LFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMVTIDGRPIKLQIWDTAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLSSWLEDA-RQHANPNMSIMLVGNKCDLAHRRAVSKEEGEQFAKENGLLFLEASARTAQNVEEAFIKTAAKI 649
            L +  I+GD GVGK+ + +QF    F   +D TI   +  + V ID +   L I DTAGQ+   ++   + R   G +LVY IT R +F+ +  + E   R     ++ IM++GNK DL   R V+ +EG+  A+  G+ F+E SA++  N+EE F +T   +
Sbjct:    9 LVRLCIMGDGGVGKTAVTIQFISNHFVYYYDPTIEDSYRKQCV-IDDQVYMLDILDTAGQDELTAMRDQWIRSCEGFVLVYSITSRSSFDQVQFFREQIIRVLDRDDVPIMMIGNKSDLDDERQVTYQEGKDLARCLGMSFMEVSAKSRANIEEVFNETVRSV 170          
BLAST of DY258646 vs. ExPASy Swiss-Prot
Match: RASH_CHICK (GTPase HRas OS=Gallus gallus GN=HRAS1 PE=1 SV=1)

HSP 1 Score: 97.0561 bits (240), Expect = 1.548e-19
Identity = 57/165 (34.55%), Postives = 88/165 (53.33%), Query Frame = 2
Query:  167 FKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMVTIDGRPIKLQIWDTAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLSSWLED-ARQHANPNMSIMLVGNKCDLAHRRAVSKEEGEQFAKENGLLFLEASARTAQNVEEAFIKTAAKILQN 658
            +K +++G  GVGKS L +Q     F   +D TI   +  + V IDG    L I DTAGQE + ++   Y R   G L V+ I   ++F  +  + E   R   + ++ ++LVGNKCDL   R V   + +  A+  G+ ++E SA+T Q VE+AF     +I Q+
Sbjct:    4 YKLVVVGAGGVGKSALTIQLIQNHFVDEYDPTIEDSY-RKQVVIDGETCLLDILDTAGQEEYSAMRDQYMRTGEGFLCVFAINNTKSFEDIHQYREQIKRVKDSDDVPMVLVGNKCDLP-ARTVETRQAQDLARSYGIPYIETSAKTRQGVEDAFYTLVREIRQH 166          
BLAST of DY258646 vs. ExPASy Swiss-Prot
Match: RIT2_RAT (GTP-binding protein Rit2 OS=Rattus norvegicus GN=Rit2 PE=2 SV=1)

HSP 1 Score: 96.6709 bits (239), Expect = 2.022e-19
Identity = 56/155 (36.13%), Postives = 83/155 (53.55%), Query Frame = 2
Query:  167 FKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMVTIDGRPIKLQIWDTAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLSSWLEDARQHANP-NMSIMLVGNKCDLAHRRAVSKEEGEQFAKENGLLFLEASARTAQNVEEAF 628
            +K +++G  GVGKS + +QF   +F   HD TI   +  + V ID  P  L I DTAGQ  F ++   Y RG  G ++ Y +T R++F   + + E   Q  +   + ++LVGNK DL   R VS EEG   A++    F E SA     +++AF
Sbjct:   21 YKVVMLGAGGVGKSAVTMQFISHQFPDYHDPTIEDAYKTQ-VRIDNEPAYLDILDTAGQAEFTAMREQYMRGGEGFIICYSVTDRQSFQEAAKFKELIFQVRHTYEIPLVLVGNKIDLEQFRQVSTEEGMTLARDYNCAFFETSAALRFGIDDAF 174          
BLAST of DY258646 vs. ExPASy Swiss-Prot
Match: RAS1_DROYA (Ras-like protein 1 OS=Drosophila yakuba GN=Ras85D PE=3 SV=1)

HSP 1 Score: 96.6709 bits (239), Expect = 2.022e-19
Identity = 55/162 (33.95%), Postives = 90/162 (55.56%), Query Frame = 2
Query:  167 FKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMVTIDGRPIKLQIWDTAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLSSWLEDARQHAN-PNMSIMLVGNKCDLAHRRAVSKEEGEQFAKENGLLFLEASARTAQNVEEAFIKTAAKI 649
            +K +++G  GVGKS L +Q     F   +D TI   +  + V IDG    L I DTAGQE + ++   Y R   G LLV+ +   ++F  + ++ E  ++  +   + ++LVGNKCDLA    V+ E+  + AK+ G+ ++E SA+T   V++AF     +I
Sbjct:    4 YKLVVVGAGGVGKSALTIQLIQNHFVDEYDPTIEDSY-RKQVVIDGETCLLDILDTAGQEEYSAMRDQYMRTGEGFLLVFAVNSAKSFEDIGTYREQIKRVKDAEEVPMVLVGNKCDLASWN-VNNEQAREVAKQYGIPYIETSAKTRMGVDDAFYTLVREI 163          
BLAST of DY258646 vs. ExPASy Swiss-Prot
Match: RAS1_DROSI (Ras-like protein 1 OS=Drosophila simulans GN=Ras85D PE=3 SV=1)

HSP 1 Score: 96.6709 bits (239), Expect = 2.022e-19
Identity = 55/162 (33.95%), Postives = 90/162 (55.56%), Query Frame = 2
Query:  167 FKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMVTIDGRPIKLQIWDTAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLSSWLEDARQHAN-PNMSIMLVGNKCDLAHRRAVSKEEGEQFAKENGLLFLEASARTAQNVEEAFIKTAAKI 649
            +K +++G  GVGKS L +Q     F   +D TI   +  + V IDG    L I DTAGQE + ++   Y R   G LLV+ +   ++F  + ++ E  ++  +   + ++LVGNKCDLA    V+ E+  + AK+ G+ ++E SA+T   V++AF     +I
Sbjct:    4 YKLVVVGAGGVGKSALTIQLIQNHFVDEYDPTIEDSY-RKQVVIDGETCLLDILDTAGQEEYSAMRDQYMRTGEGFLLVFAVNSAKSFEDIGTYREQIKRVKDAEEVPMVLVGNKCDLASWN-VNNEQAREVAKQYGIPYIETSAKTRMGVDDAFYTLVREI 163          
BLAST of DY258646 vs. ExPASy Swiss-Prot
Match: RAS1_DROME (Ras-like protein 1 OS=Drosophila melanogaster GN=Ras85D PE=1 SV=2)

HSP 1 Score: 96.6709 bits (239), Expect = 2.022e-19
Identity = 55/162 (33.95%), Postives = 90/162 (55.56%), Query Frame = 2
Query:  167 FKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMVTIDGRPIKLQIWDTAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLSSWLEDARQHAN-PNMSIMLVGNKCDLAHRRAVSKEEGEQFAKENGLLFLEASARTAQNVEEAFIKTAAKI 649
            +K +++G  GVGKS L +Q     F   +D TI   +  + V IDG    L I DTAGQE + ++   Y R   G LLV+ +   ++F  + ++ E  ++  +   + ++LVGNKCDLA    V+ E+  + AK+ G+ ++E SA+T   V++AF     +I
Sbjct:    4 YKLVVVGAGGVGKSALTIQLIQNHFVDEYDPTIEDSY-RKQVVIDGETCLLDILDTAGQEEYSAMRDQYMRTGEGFLLVFAVNSAKSFEDIGTYREQIKRVKDAEEVPMVLVGNKCDLASWN-VNNEQAREVAKQYGIPYIETSAKTRMGVDDAFYTLVREI 163          
BLAST of DY258646 vs. ExPASy Swiss-Prot
Match: RAS1_DROMA (Ras-like protein 1 OS=Drosophila mauritiana GN=Ras85D PE=3 SV=1)

HSP 1 Score: 96.6709 bits (239), Expect = 2.022e-19
Identity = 55/162 (33.95%), Postives = 90/162 (55.56%), Query Frame = 2
Query:  167 FKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMVTIDGRPIKLQIWDTAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLSSWLEDARQHAN-PNMSIMLVGNKCDLAHRRAVSKEEGEQFAKENGLLFLEASARTAQNVEEAFIKTAAKI 649
            +K +++G  GVGKS L +Q     F   +D TI   +  + V IDG    L I DTAGQE + ++   Y R   G LLV+ +   ++F  + ++ E  ++  +   + ++LVGNKCDLA    V+ E+  + AK+ G+ ++E SA+T   V++AF     +I
Sbjct:    4 YKLVVVGAGGVGKSALTIQLIQNHFVDEYDPTIEDSY-RKQVVIDGETCLLDILDTAGQEEYSAMRDQYMRTGEGFLLVFAVNSAKSFEDIGTYREQIKRVKDAEEVPMVLVGNKCDLASWN-VNNEQAREVAKQYGIPYIETSAKTRMGVDDAFYTLVREI 163          
BLAST of DY258646 vs. ExPASy Swiss-Prot
Match: RAS1_DROER (Ras-like protein 1 OS=Drosophila erecta GN=Ras85D PE=3 SV=1)

HSP 1 Score: 96.6709 bits (239), Expect = 2.022e-19
Identity = 55/162 (33.95%), Postives = 90/162 (55.56%), Query Frame = 2
Query:  167 FKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMVTIDGRPIKLQIWDTAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLSSWLEDARQHAN-PNMSIMLVGNKCDLAHRRAVSKEEGEQFAKENGLLFLEASARTAQNVEEAFIKTAAKI 649
            +K +++G  GVGKS L +Q     F   +D TI   +  + V IDG    L I DTAGQE + ++   Y R   G LLV+ +   ++F  + ++ E  ++  +   + ++LVGNKCDLA    V+ E+  + AK+ G+ ++E SA+T   V++AF     +I
Sbjct:    4 YKLVVVGAGGVGKSALTIQLIQNHFVDEYDPTIEDSY-RKQVVIDGETCLLDILDTAGQEEYSAMRDQYMRTGEGFLLVFAVNSAKSFEDIGTYREQIKRVKDAEEVPMVLVGNKCDLASWN-VNNEQAREVAKQYGIPYIETSAKTRMGVDDAFYTLVREI 163          
The following BLAST results are available for this feature:
BLAST of DY258646 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
RIT1_MOUSE1.548e-1935.12GTP-binding protein Rit1 OS=Mus musculus GN=Rit1 P... [more]
RIT1_HUMAN1.548e-1934.50GTP-binding protein Rit1 OS=Homo sapiens GN=RIT1 P... [more]
RASZ_DICDI1.548e-1934.97Ras-like protein rasZ OS=Dictyostelium discoideum ... [more]
RASH_CHICK1.548e-1934.55GTPase HRas OS=Gallus gallus GN=HRAS1 PE=1 SV=1[more]
RIT2_RAT2.022e-1936.13GTP-binding protein Rit2 OS=Rattus norvegicus GN=R... [more]
RAS1_DROYA2.022e-1933.95Ras-like protein 1 OS=Drosophila yakuba GN=Ras85D ... [more]
RAS1_DROSI2.022e-1933.95Ras-like protein 1 OS=Drosophila simulans GN=Ras85... [more]
RAS1_DROME2.022e-1933.95Ras-like protein 1 OS=Drosophila melanogaster GN=R... [more]
RAS1_DROMA2.022e-1933.95Ras-like protein 1 OS=Drosophila mauritiana GN=Ras... [more]
RAS1_DROER2.022e-1933.95Ras-like protein 1 OS=Drosophila erecta GN=Ras85D ... [more]

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Properties
Property NameValue
Genbank descriptionKN0AAI2DC01FM1 AbsDev1 Citrus clementina cDNA 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DY258646 ID=DY258646; Name=DY258646; organism=Citrus clementina; type=EST; length=916bp
CGACGTATAATAAGCATATCAGCAGCAGGCAGCGGCGTCTTCTTCGTCTT
TTATTGTTGTTGAGTTGAGTTGAGTTGAGTTGAGTTGAGTTGAGTTGAGT
TGAGTTGAGAGACAGAGTTCATCTAAAAGAAACAACAGCAACAACAACAT
GTCGTACGATTATCTGTTCAAGTACATAATCATCGGAGACACTGGAGTAG
GGAAATCATGCTTGCTATTGCAATTCACGGACAAGAGGTTTCAGCCCGTT
CATGATTTGACCATCGGCGTTGAATTCGGTGCTCGCATGGTCACCATCGA
TGGTCGCCCCATCAAGCTCCAGATTTGGGACACCGCTGGCCAAGAATCTT
TCAGATCTATCACAAGATCTTATTACAGAGGAGCGGCTGGGGCACTTCTG
GTTTATGATATTACAAGGAGAGAGACATTTAATCATCTATCAAGCTGGCT
GGAGGATGCGCGGCAGCATGCTAATCCCAACATGTCAATCATGCTCGTTG
GTAACAAGTGTGATCTTGCTCATCGGAGGGCTGTTAGCAAGGAGGAAGGC
GAACAGTTTGCAAAGGAGAATGGGCTTCTGTTTCTGGAAGCATCTGCAAG
AACAGCTCAGAATGTTGAGGAGGCTTTTATAAAGACTGCTGCAAAGATCC
TTCAAAATATTCAGGAAGGAGCACTTGATGCAGTAAATGATCAGTCTGGA
ATTAAGGTTGGGTACGGACGCGGCCAAGGACCATCAGGTGCAAGAGATGG
AACCGTTTCACAGAGAGGTGGATGTTGCAGTTAAATTCATACGAATGTGG
ATTCTGTATTTCATCCCTTTCAGCCATTTATATAGGCCTTACCCCTAACT
TGGATATATCAGTCCAGTATTGTCACGCAAAAACCTGTGAGGGATATGAA
TGTAAAGATCTTATCT
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