DY258647
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of DY258647 vs. ExPASy Swiss-Prot
Match: TPIS_SYNJA (Triosephosphate isomerase OS=Synechococcus sp. (strain JA-3-3Ab) GN=tpiA PE=3 SV=1) HSP 1 Score: 145.591 bits (366), Expect = 5.942e-34 Identity = 94/249 (37.75%), Postives = 126/249 (50.60%), Query Frame = 3 Query: 66 RKFFVGGNWKCNGTSEEVKKIVSTLNEAEXXXXXXXXXXXXXXXXXXXXXKSLL-----RSDFHVAAQNCWVRKGGAFTGEVSAEMLVNLSIPWVILGHSERRALLNESNDFVGDKVAYALSRGLKVIACVGETLEQRESGSTVAVVAEQTKAIAEKISNWDNVVLAYEPVWAIGTGKVATPAQAQEVHAELRKWLKDNVSAEVAASTRIIYGGSVNGANCKELAAQPDVDGFLVGGASLKP-EFIDII 794 R + GNWK + T E ++ + A +++ S V AQN GAFTGE+S ML L + +VI+GHSERR E+++ V ++A A GL I CVGE+L+QRE G T + + Q I + N+V+AYEP+WAIGTGK A+A V +R+ L A I+YGGSV +N EL AQP +DG LVGGASL P EF I+ Sbjct: 2 RPILIAGNWKMHKTQAEARQFLREFRPALQASSAGVRPQRQIILCVPFTDLAVVVEETRGSGMAVGAQNLHWEDQGAFTGEISGPMLAELGVRYVIVGHSERRQYFGETDETVNRRLAAAQRHGLTPILCVGESLQQREQGLTESWIVGQLDRALPGI-DLRNLVIAYEPIWAIGTGKTCAAAEANRVIGLIRQHLG-------ADHLPILYGGSVKASNIDELMAQPQIDGVLVGGASLDPQEFARIV 242
BLAST of DY258647 vs. ExPASy Swiss-Prot
Match: TPIS_STRAW (Triosephosphate isomerase OS=Streptomyces avermitilis GN=tpiA PE=3 SV=1) HSP 1 Score: 145.591 bits (366), Expect = 5.942e-34 Identity = 84/186 (45.16%), Postives = 110/186 (59.14%), Query Frame = 3 Query: 249 AQNCWVRKGGAFTGEVSAEMLVNLSIPWVILGHSERRALLNESNDFVGDKVAYALSRGLKVIACVGETLEQRESGSTVAVVAEQTKAIAEKI--SNWDNVVLAYEPVWAIGTGKVATPAQAQEVHAELRKWLKDNVSAEVAASTRIIYGGSVNGANCKELAAQPDVDGFLVGGASL-KPEFIDIIK 797 AQ+ GA+TGE+S ML L +V +GHSERR +E+++ V KV + GL I CVGE LE RE+G+ V Q + + + + +V+AYEPVWAIGTGKV AQEV A +R L + S E+A RI YGGSV N E+ A+PD+DG LVGGASL EF+ I + Sbjct: 69 AQDVSAHDSGAYTGEISGSMLAKLKCTYVAVGHSERRQYHHETDEIVNAKVKASFRHGLIPILCVGEELEVREAGNHVTHTLTQVEGGLKDVPAEQAETIVIAYEPVWAIGTGKVCGADDAQEVCAAIRAKLAELYSQELADQVRIQYGGSVKSGNVAEIMAKPDIDGALVGGASLDADEFVKIAR 254
BLAST of DY258647 vs. ExPASy Swiss-Prot
Match: TPIS_LACLM (Triosephosphate isomerase OS=Lactococcus lactis subsp. cremoris (strain MG1363) GN=tpiA PE=3 SV=1) HSP 1 Score: 145.591 bits (366), Expect = 5.942e-34 Identity = 89/245 (36.33%), Postives = 127/245 (51.84%), Query Frame = 3 Query: 60 MARKFFVGGNWKCNGTSEEVKKIVSTLNEAEXXXXXXXXXXXXXXXXXXXXXKSLLRSDFHVAAQNCWVRKGGAFTGEVSAEMLVNLSIPWVILGHSERRALLNESNDFVGDKVAYALSRGLKVIACVGETLEQRESGSTVAVVAEQTKA-----IAEKISNWDNVVLAYEPVWAIGTGKVATPAQAQEVHAELRKWLKDNVSAEVAASTRIIYGGSVNGANCKELAAQPDVDGFLVGGASLKPE 779 M+RK + GNWK N T E + V + S+ +AA+N + GAFTGE S +V+L I ++I+GHSERR +E+++ + K + G I C GETLE E+G T V+ Q +A AE++SN +V+AYEP+WAIGTGK AT A E +R ++ EV+ + RI YGGSV + L A+ ++DG LVGGASL+ + Sbjct: 1 MSRKPIIAGNWKMNKTLSEAQAFVEAVKNNLPSSDNVESVIGAPALFLAPMAYLRQGSELKLAAENSYFENAGAFTGENSPAAIVDLGIEYIIIGHSERREYFHETDEDINKKAKAIFAAGATPILCCGETLETFEAGKTAEWVSGQIEAGLAGLTAEQVSN---LVIAYEPIWAIGTGKTATNEIADETCGVVRSTVEKLYGKEVSEAVRIQYGGSVKPETIEGLMAKENIDGALVGGASLEAD 242
BLAST of DY258647 vs. ExPASy Swiss-Prot
Match: TPIS_BRASB (Triosephosphate isomerase OS=Bradyrhizobium sp. (strain BTAi1 / ATCC BAA-1182) GN=tpiA PE=3 SV=1) HSP 1 Score: 145.591 bits (366), Expect = 5.942e-34 Identity = 92/242 (38.02%), Postives = 125/242 (51.65%), Query Frame = 3 Query: 78 VGGNWKCNGTSEEVKKIVSTL-NEAEXXXXXXXXXXXXXXXXXXXXXKSLLRSDFHVAAQNCWVRKGGAFTGEVSAEMLVNLSIPWVILGHSERRALLNESNDFVGDKVAYALSRGLKVIACVGETLEQRESGSTVAVVAEQTKAIAEKISNWDNVVLAYEPVWAIGTGKVATPAQAQEVHAELRKWLKDNVSAEVAASTRIIYGGSVNGANCKELAAQPDVDGFLVGGASLK-PEFIDIIK 797 + GNWK NG + + L AE K+ V AQ+C + GA TG++SAEML + +I+GHSERRA ES+ V K GL I CVGET +QR++G T+ ++ Q + S N+ +AYEPVWAIGTG T +++HA +R L + + E A RI+YGGSV +N EL A +V+G LVGGASLK +F+ I K Sbjct: 9 IAGNWKMNGLKASTAEFEAMLAGAAEVTGKADLLVCPPATLLAGFADKARGTRAVAVGAQDCHAKASGAHTGDLSAEMLADAGASAIIVGHSERRADHGESDVVVHQKTEAVWRAGLVAIVCVGETQQQRDAGQTLDILRGQLNLSLPQGSTAANLTVAYEPVWAIGTGLTPTAKDVEQIHAFIRTLLIERFNGE-GARMRILYGGSVKPSNAAELMAVANVNGALVGGASLKAADFLAIAK 249
BLAST of DY258647 vs. ExPASy Swiss-Prot
Match: TPIS_AMOA5 (Triosephosphate isomerase OS=Amoebophilus asiaticus (strain 5a2) GN=tpiA PE=3 SV=1) HSP 1 Score: 145.591 bits (366), Expect = 5.942e-34 Identity = 88/254 (34.65%), Postives = 132/254 (51.97%), Query Frame = 3 Query: 66 RKFFVGGNWKCNGTSEE---VKKIVSTLNEAEXXXXXXXXXXXXXXXXXXXXXKSLLRSDFHVAAQNCWVRKGGAFTGEVSAEMLVNLSIPWVILGHSERRALLNESNDFVGDKVAYALSRGLKVIACVGETLEQRESGSTVAVVAEQTKAIAEKI-----SNWDNVVLAYEPVWAIGTGKVATPAQAQEVHAELRKWLKDNVSAEVAASTRIIYGGSVNGANCKELAAQPDVDGFLVGGASLK-PEFIDIIKS 800 ++ + NWK N +E + K ++ +AE H+ AQNC + GAFTGEVSA ML ++ + +V++GHSERR E ND + K+ LS L+ + C GE L RES A + +Q IAE + V++AYEP+WAIGTG + + A+ +E+ +R LK + +A + I+YGGS N +N +L + P ++G L+GGASL EFI I++S Sbjct: 2 QRTIIAANWKMNKNFQEGLQLAKEITQFIQAEPLAGAQIILFPSFIHLEGISKLLTPEVKLHLGAQNCHDQIAGAFTGEVSAAMLASIDVRYVLVGHSERRQNFAEDNDLIAKKIDAILSCKLQPVFCCGEPLSVRESNQHYAFIEQQ---IAESLFHLTPDELQQVIIAYEPIWAIGTGLIPSLAEIEEMQQTIRNILKKQYNTVLADNMAILYGGSCNASNITKLISLPGINGVLIGGASLHFKEFIHILRS 252
BLAST of DY258647 vs. ExPASy Swiss-Prot
Match: TPIS_SYNR3 (Triosephosphate isomerase OS=Synechococcus sp. (strain RCC307) GN=tpiA PE=3 SV=1) HSP 1 Score: 145.206 bits (365), Expect = 7.761e-34 Identity = 87/240 (36.25%), Postives = 125/240 (52.08%), Query Frame = 3 Query: 63 ARKFFVGGNWKCNGTSEEVKKIVST-LNEAEXXXXXXXXXXXXXXXXXXXXXKSLLRSDFHVAAQNCWVRKGGAFTGEVSAEMLVNLSIPWVILGHSERRALLNESNDFVGDKVAYALSRGLKVIACVGETLEQRESGSTVAVVAEQTKAIAEKISNWDNVVLAYEPVWAIGTGKVATPAQAQEVHAELRKWLKDNVSAEVAASTRIIYGGSVNGANCKELAAQPDVDGFLVGGASLKPE 779 +R + GNWK + T + K+ + L + ++L SD +A+QN + GAFTGE+SAEML+ L + + I+GHSE R +ES++ + + + + GL I CVGE+ EQR S T V+ Q + E I +V+AYEP+WAIGTGK +A V +R W+ + I YGGSV N EL A+ D+DG LVGGASL+P+ Sbjct: 5 SRPVVIAGNWKMHMTCAQAKQYAAAFLPQVANAPKDRSIVLAPPFTAISTLQEALAGSDVQIASQNVHWKDSGAFTGEISAEMLLELGVGYTIVGHSEPRKYFSESDEQINQRARASQAAGLIPILCVGESDEQRSSNETERVIRRQVEQGLEGIDP-SKLVVAYEPIWAIGTGKTCESEEANRVCGLIRNWVG-------YPNLTIQYGGSVKPGNIDELMAKSDIDGVLVGGASLEPD 236
BLAST of DY258647 vs. ExPASy Swiss-Prot
Match: TPIS_PEDPA (Triosephosphate isomerase OS=Pediococcus pentosaceus (strain ATCC 25745 / 183-1w) GN=tpiA PE=3 SV=1) HSP 1 Score: 145.206 bits (365), Expect = 7.761e-34 Identity = 90/245 (36.73%), Postives = 127/245 (51.84%), Query Frame = 3 Query: 78 VGGNWKCNGTSEEVKKIVSTLNEAEXXXXXXXXXXXXXXXXXXXXXKSLLRSDFHVAAQNCWVRKGGAFTGEVSAEMLVNLSIPWVILGHSERRALLNESNDFVGDKVAYALSRGLKVIACVGETLEQRESGSTVAVVAEQ-TKAI----AEKISNWDNVVLAYEPVWAIGTGKVATPAQAQEVHAELRKWLKDNVSAEVAASTRIIYGGSVNGANCKELAAQPDVDGFLVGGASLKPE-FIDII 794 + GNWK N +E ++ + + AA+N + GAFTGE S + L + + +V++GHSERR E+++ + K + + I C GETLEQRE+G T VA Q T A+ AE+++ V+AYEP+WAIGTGK A+ QAQEV +R+ + VA RI YGGSV AN EL + D+DG LVGGASL PE F++++ Sbjct: 6 IAGNWKMNKNPQETQEFLDAIKGKLPDASVVESVIAAPAIDLSTLVAFSKDEQLKTAAENSYFEDEGAFTGETSPKALNEMGVNYVVIGHSERRQYFGETDEDINKKAKAIFNNNMTPIICCGETLEQREAGETNEWVAGQITNALKDLTAEQVAA---SVIAYEPIWAIGTGKTASSDQAQEVCHVIRETVAKLYDQTVADKVRIQYGGSVKPANIAELMGKEDIDGGLVGGASLDPESFLELV 247
BLAST of DY258647 vs. ExPASy Swiss-Prot
Match: TPIS_MYCSS (Triosephosphate isomerase OS=Mycobacterium sp. (strain MCS) GN=tpiA PE=3 SV=1) HSP 1 Score: 145.206 bits (365), Expect = 7.761e-34 Identity = 94/246 (38.21%), Postives = 124/246 (50.41%), Query Frame = 3 Query: 60 MARKFFVGGNWKCNGTSEE----VKKIVSTLNEAEXXXXXXXXXXXXXXXXXXXXXKSLLRSDFHVAAQNCWVRKGGAFTGEVSAEMLVNLSIPWVILGHSERRALLNESNDFVGDKVAYALSRGLKVIACVGETLEQRESGSTVAVVAEQTKAIAEKISNWD--NVVLAYEPVWAIGTGKVATPAQAQEVHAELRKWLKDNVSAEVAASTRIIYGGSVNGANCKELAAQPDVDGFLVGGASLKPE 779 MARK + GNWK N E V+KI +L + + AQ+ GA+TGE+S L L + ++GHSERR +E + V K A A G+ I C+GE L+ RE+G+ V EQ + +++ V+AYEPVWAIGTG+VA A AQEV +R L S ++AA R++YGGSVN N E+ AQ DVDG LVGGASL E Sbjct: 1 MARKPLIAGNWKMNLNHFEAIALVQKIAFSLPDKYFDKVDVTVIPPFTDLRSVQTLVDGDKLRLSYGAQDVSQHDSGAYTGEISGAFLAKLGCSFAVVGHSERRTYHHEDDALVAAKAAAAFRHGITPIVCIGEHLKVREAGNHVEHNVEQLRGSLAGLTSEQIGQAVIAYEPVWAIGTGRVAGAADAQEVCKAIRDELGKLSSPQLAAGIRVLYGGSVNAKNVGEIVAQEDVDGALVGGASLDGE 246
BLAST of DY258647 vs. ExPASy Swiss-Prot
Match: TPIS_MYCSK (Triosephosphate isomerase OS=Mycobacterium sp. (strain KMS) GN=tpiA PE=3 SV=1) HSP 1 Score: 145.206 bits (365), Expect = 7.761e-34 Identity = 94/246 (38.21%), Postives = 124/246 (50.41%), Query Frame = 3 Query: 60 MARKFFVGGNWKCNGTSEE----VKKIVSTLNEAEXXXXXXXXXXXXXXXXXXXXXKSLLRSDFHVAAQNCWVRKGGAFTGEVSAEMLVNLSIPWVILGHSERRALLNESNDFVGDKVAYALSRGLKVIACVGETLEQRESGSTVAVVAEQTKAIAEKISNWD--NVVLAYEPVWAIGTGKVATPAQAQEVHAELRKWLKDNVSAEVAASTRIIYGGSVNGANCKELAAQPDVDGFLVGGASLKPE 779 MARK + GNWK N E V+KI +L + + AQ+ GA+TGE+S L L + ++GHSERR +E + V K A A G+ I C+GE L+ RE+G+ V EQ + +++ V+AYEPVWAIGTG+VA A AQEV +R L S ++AA R++YGGSVN N E+ AQ DVDG LVGGASL E Sbjct: 1 MARKPLIAGNWKMNLNHFEAIALVQKIAFSLPDKYFDKVDVTVIPPFTDLRSVQTLVDGDKLRLSYGAQDVSQHDSGAYTGEISGAFLAKLGCSFAVVGHSERRTYHHEDDALVAAKAAAAFRHGITPIVCIGEHLKVREAGNHVEHNVEQLRGSLAGLTSEQIGQAVIAYEPVWAIGTGRVAGAADAQEVCKAIRDELGKLSSPQLAAGIRVLYGGSVNAKNVGEIVAQEDVDGALVGGASLDGE 246
BLAST of DY258647 vs. ExPASy Swiss-Prot
Match: TPIS_MYCSJ (Triosephosphate isomerase OS=Mycobacterium sp. (strain JLS) GN=tpiA PE=3 SV=1) HSP 1 Score: 145.206 bits (365), Expect = 7.761e-34 Identity = 94/246 (38.21%), Postives = 124/246 (50.41%), Query Frame = 3 Query: 60 MARKFFVGGNWKCNGTSEE----VKKIVSTLNEAEXXXXXXXXXXXXXXXXXXXXXKSLLRSDFHVAAQNCWVRKGGAFTGEVSAEMLVNLSIPWVILGHSERRALLNESNDFVGDKVAYALSRGLKVIACVGETLEQRESGSTVAVVAEQTKAIAEKISNWD--NVVLAYEPVWAIGTGKVATPAQAQEVHAELRKWLKDNVSAEVAASTRIIYGGSVNGANCKELAAQPDVDGFLVGGASLKPE 779 MARK + GNWK N E V+KI +L + + AQ+ GA+TGE+S L L + ++GHSERR +E + V K A A G+ I C+GE L+ RE+G+ V EQ + +++ V+AYEPVWAIGTG+VA A AQEV +R L S ++AA R++YGGSVN N E+ AQ DVDG LVGGASL E Sbjct: 1 MARKPLIAGNWKMNLNHFEAIALVQKIAFSLPDKYFDKVDVTVIPPFTDLRSVQTLVDGDKLRLSYGAQDVSQHDSGAYTGEISGAFLAKLGCSFAVVGHSERRTYHHEDDALVAAKAAAAFRHGITPIVCIGEHLKVREAGNHVEHNVEQLRGSLAGLTSEQIGQAVIAYEPVWAIGTGRVAGAADAQEVCKAIRDELGKLSSPQLAAGIRVLYGGSVNAKNVGEIVAQEDVDGALVGGASLDGE 246 The following BLAST results are available for this feature:
BLAST of DY258647 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >DY258647 ID=DY258647; Name=DY258647; organism=Citrus clementina; type=EST; length=1267bpback to top |