DY258649

Overview
NameDY258649
Unique NameDY258649
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length875
Libraries
Library NameType
AbsDev1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of DY258649 vs. ExPASy Swiss-Prot
Match: C13A2_CAEEL (Putative cytochrome P450 CYP13A2 OS=Caenorhabditis elegans GN=cyp-13A2 PE=2 SV=1)

HSP 1 Score: 124.02 bits (310), Expect = 1.095e-27
Identity = 65/181 (35.91%), Postives = 106/181 (58.56%), Query Frame = 1
Query:  103 KGISRDDVIDECKLFYFAGQETTSVLLLWTMVLLSKHQDWQAHAREEVLQVFGDKKPDFDGLNRLKIVQMIFYEVLRLYPPLPVL-SRYVEKETKIGDLILPAESVIALQTLLVHHDKKLWGDDAKEFKPERFSEGISKATKNQVSYFPFAWGPRICIGQNFALVEAKMAMAMILQNFSFE 642
            K +S D+V+ +C LF   G +TT++ L +   LL+ +   Q    EE+ + FG  + +F+ L RLK +  +  E LRLYP   +  SR   K T +  + + A   + + T  +H+D +LWG+D KEFKPER+S    +  +++ +Y PF  GPR CIG   A++E K+ +  +L+N++FE
Sbjct:  306 KELSADEVVGQCFLFLIGGFDTTALSLSYVTYLLAVNPKIQEKVIEEIAREFGTSEVEFEKLGRLKYMDCVIKEALRLYPLASISNSRKCMKTTTVNGVKIEAGVYVQMDTWSLHYDPELWGEDVKEFKPERWS--TDEPLEHKGAYLPFGLGPRQCIGMRLAIMEQKILLTHLLKNYTFE 484          
BLAST of DY258649 vs. ExPASy Swiss-Prot
Match: CP3A6_RABIT (Cytochrome P450 3A6 OS=Oryctolagus cuniculus GN=CYP3A6 PE=2 SV=2)

HSP 1 Score: 122.479 bits (306), Expect = 3.186e-27
Identity = 75/214 (35.05%), Postives = 118/214 (55.14%), Query Frame = 1
Query:   10 MKTGEAAKDDLLGLLMES-NLKEIKEHGNNKLKGISRDDVIDECKLFYFAGQETTSVLLLWTMVLLSKHQDWQAHAREEVLQVFGDKK-PDFDGLNRLKIVQMIFYEVLRLYPPLPVLSRYVEKETKIGDLILPAESVIALQTLLVHHDKKLWGDDAKEFKPERFSEGISKATKNQVSYFPFAWGPRICIGQNFALVEAKMAMAMILQNFSFEL 645
            +K  +  + D L L++ S N KEI  H     K +   +V+ +  +  FAG ETTS  L + M LL+ H D Q   +EE+  +  +K+   +D L +++ + M+  E LRLYP    L R  +K+  I    +P  +++ + T  +H D + W  +  EF+PERFS+  +K   N   Y PF  GPR C+G  FAL+  K+A+  ++QNFSF+L
Sbjct:  259 LKDKQKRRVDFLQLMINSQNSKEIDSH-----KALDDIEVVAQSIIILFAGYETTSSTLSFIMHLLATHPDVQQKLQEEIDTLLPNKELATYDTLVKMEYLDMVVNETLRLYPIAGRLERVCKKDVDINGTFIPKGTIVMMPTYALHRDPQHW-TEPDEFRPERFSKK-NKDNINPYIYHPFGAGPRNCLGMRFALMNIKLALVRLMQNFSFKL 465          
BLAST of DY258649 vs. ExPASy Swiss-Prot
Match: CP3A7_HUMAN (Cytochrome P450 3A7 OS=Homo sapiens GN=CYP3A7 PE=1 SV=2)

HSP 1 Score: 122.094 bits (305), Expect = 4.161e-27
Identity = 75/213 (35.21%), Postives = 122/213 (57.28%), Query Frame = 1
Query:   10 MKTGEAAKDDLLGLLMES-NLKEIKEHGNNKLKGISRDDVIDECKLFYFAGQETTSVLLLWTMVLLSKHQDWQAHAREEVLQVFGDKKPD-FDGLNRLKIVQMIFYEVLRLYPPLPVLSRYVEKETKIGDLILPAESVIALQTLLVHHDKKLWGDDAKEFKPERFSEGISKATKNQVSYFPFAWGPRICIGQNFALVEAKMAMAMILQNFSFE 642
            +K  +  + D L L+++S N K+ + H     K +S  +++ +  +F FAG ETTS +L + +  L+ H D Q   ++E+  V  +K P  +D + +L+ + M+  E LRL+P    L R  +K+ +I  + +P   V+ + + ++HHD K W +  K F PERFS+  +K   +   Y PF  GPR CIG  FALV  K+A+  +LQNFSF+
Sbjct:  261 LKETQKHRVDFLQLMIDSQNSKDSETH-----KALSDLELMAQSIIFIFAGYETTSSVLSFIIYELATHPDVQQKVQKEIDTVLPNKAPPTYDTVLQLEYLDMVVNETLRLFPVAMRLERVCKKDVEINGMFIPKGVVVMIPSYVLHHDPKYWREPEK-FLPERFSKK-NKDNIDPYIYTPFGSGPRNCIGMRFALVNMKLALVRVLQNFSFK 466          
BLAST of DY258649 vs. ExPASy Swiss-Prot
Match: C13AA_CAEEL (Putative cytochrome P450 CYP13A10 OS=Caenorhabditis elegans GN=cyp-13A10 PE=2 SV=3)

HSP 1 Score: 122.094 bits (305), Expect = 4.161e-27
Identity = 72/211 (34.12%), Postives = 118/211 (55.92%), Query Frame = 1
Query:   22 EAAKDDLLGLLMESN--LKEIKEHGNNKLKGISRDDVIDECKLFYFAGQETTSVLLLWTMVLLSKHQDWQAHAREEVLQVFGDKKPDFDGLNRLKIVQMIFYEVLRLYPPLPVL-SRYVEKETKIGDLILPAESVIALQTLLVHHDKKLWGDDAKEFKPERFSEGISKATKNQVSYFPFAWGPRICIGQNFALVEAKMAMAMILQNFSFEL 645
            EA  DD+     E+N    +   +GN +L   +  +++ +C +F  AG +TT++ L +T  LL+ H + Q   +EE+ +   +    FD L++LK +  I  E LRLYP   +  SR   + TK+G++ +   +++ + T  +H D K+WGDDAKEFKPER+ +        +  Y  F  GPR C+G   A +E KM +A IL+ ++FE+
Sbjct:  284 EARADDVEHF-QENNGDFSKTSSYGNRQL---TTQEIVGQCLVFLIAGFDTTALSLSYTTFLLATHPEVQKKLQEEIERECIEPSISFDHLSKLKYMDCIIKETLRLYPLGTMANSRRCMRATKLGNVEVEVGTMVQVDTWSLHTDTKIWGDDAKEFKPERWLDPNCDQVFQKGGYISFGLGPRQCVGMRLAYMEEKMLLAHILRKYTFEV 490          
BLAST of DY258649 vs. ExPASy Swiss-Prot
Match: CP3AS_BOVIN (Cytochrome P450 3A28 OS=Bos taurus GN=CYP3A28 PE=2 SV=1)

HSP 1 Score: 121.709 bits (304), Expect = 5.434e-27
Identity = 71/204 (34.80%), Postives = 118/204 (57.84%), Query Frame = 1
Query:   37 DLLGLLMES-NLKEIKEHGNNKLKGISRDDVIDECKLFYFAGQETTSVLLLWTMVLLSKHQDWQAHAREEVLQVFGDKKPD-FDGLNRLKIVQMIFYEVLRLYPPLPVLSRYVEKETKIGDLILPAESVIALQTLLVHHDKKLWGDDAKEFKPERFSEGISKATKNQVSYFPFAWGPRICIGQNFALVEAKMAMAMILQNFSFE 642
            DLL L++ S N KEI  H     K +S  +++ +  +F F G ETTS  L + +  L+ H   Q   +EE+   F +K P  +D L +++ + M+  E LR++P    L R  +K+ +I  + +P  + + +   ++H++ +LW  + +EF+PERFS+  +K + N   Y PF  GPR C+G  FA++  K+A+  ILQNFSF+
Sbjct:  270 DLLQLMINSQNSKEIDNH-----KALSDIELVAQSTIFIFGGYETTSSTLSFIIYELTTHPHVQQKLQEEIDATFPNKAPPTYDALVQMEYLDMVVNETLRMFPIAGRLERVCKKDVEIHGVTIPKGTTVLVPLFVLHNNPELW-PEPEEFRPERFSKN-NKDSINPYVYLPFGTGPRNCLGMRFAIMNIKLALVRILQNFSFK 466          
BLAST of DY258649 vs. ExPASy Swiss-Prot
Match: CP3A9_RAT (Cytochrome P450 3A9 OS=Rattus norvegicus GN=Cyp3a9 PE=2 SV=2)

HSP 1 Score: 121.709 bits (304), Expect = 5.434e-27
Identity = 73/215 (33.95%), Postives = 118/215 (54.88%), Query Frame = 1
Query:    1 EIAMKTGEAAKDDLLGLLMESNLKEIKEHGNNKLKGISRDDVIDECKLFYFAGQETTSVLLLWTMVLLSKHQDWQAHAREEVLQVFGDKK-PDFDGLNRLKIVQMIFYEVLRLYPPLPVLSRYVEKETKIGDLILPAESVIALQTLLVHHDKKLWGDDAKEFKPERFSEGISKATKNQVSYFPFAWGPRICIGQNFALVEAKMAMAMILQNFSFE 642
            E  MK  E  + D L L++ S   ++K+      K +S  +++ +  +F FAG ETTS  L + + LL+ H D Q   ++E+     +K    +D L +++ + M+  E LRLYP    L R  + + +I  + +P  +V+ + T  +H D   W  + +EF+PERFS+  ++   N   Y PF  GPR CIG  FAL+  K+A+  +LQNFSF+
Sbjct:  258 ENRMKEKEKQRMDFLQLMINSQNSKVKDSH----KALSDVEIVAQSVIFIFAGYETTSSALSFVLYLLAIHPDIQKKLQDEIDAALPNKAHATYDTLLQMEYLDMVVNETLRLYPIAGRLERVCKTDVEINGVFIPKGTVVMIPTFALHKDPHYW-PEPEEFRPERFSKK-NQDNINPYMYLPFGNGPRNCIGMRFALMNMKVALFRVLQNFSFQ 466          
BLAST of DY258649 vs. ExPASy Swiss-Prot
Match: CP3A2_RAT (Cytochrome P450 3A2 OS=Rattus norvegicus GN=Cyp3a2 PE=1 SV=2)

HSP 1 Score: 121.709 bits (304), Expect = 5.434e-27
Identity = 71/194 (36.60%), Postives = 108/194 (55.67%), Query Frame = 1
Query:   76 IKEHGNNK----LKGISRDDVIDECKLFYFAGQETTSVLLLWTMVLLSKHQDWQAHAREEVLQVFGDKKPD-FDGLNRLKIVQMIFYEVLRLYPPLPVLSRYVEKETKIGDLILPAESVIALQTLLVHHDKKLWGDDAKEFKPERFSEGISKATKNQVSYFPFAWGPRICIGQNFALVEAKMAMAMILQNFSFE 642
            +  H N+K     K +S  ++I +  +F FAG ETTS  L + +  L+ H D Q   +EE+      K P  +D +  ++ + M+  E LRLYP    L R  +K+ ++  L +P  SV+ + T  +HHD + W    +EF PERFS+  +K + +   Y PF  GPR CIG  FAL+  K+A+  +LQNFSF+
Sbjct:  276 LNAHNNSKDEVSHKALSDVEIIAQSVIFIFAGYETTSSTLSFVLYFLATHPDIQKKLQEEIDGALPSKAPPTYDIVMEMEYLDMVLNETLRLYPIGNRLERVCKKDIELDGLFIPKGSVVTIPTYALHHDPQHW-PKPEEFHPERFSKE-NKGSIDPYVYLPFGNGPRNCIGMRFALMNMKLALTKVLQNFSFQ 467          
BLAST of DY258649 vs. ExPASy Swiss-Prot
Match: CP3AB_MOUSE (Cytochrome P450 3A11 OS=Mus musculus GN=Cyp3a11 PE=1 SV=1)

HSP 1 Score: 121.324 bits (303), Expect = 7.098e-27
Identity = 71/205 (34.63%), Postives = 116/205 (56.59%), Query Frame = 1
Query:   37 DLLGLLMES--NLKEIKEHGNNKLKGISRDDVIDECKLFYFAGQETTSVLLLWTMVLLSKHQDWQAHAREEVLQVFGDKKPD-FDGLNRLKIVQMIFYEVLRLYPPLPVLSRYVEKETKIGDLILPAESVIALQTLLVHHDKKLWGDDAKEFKPERFSEGISKATKNQVSYFPFAWGPRICIGQNFALVEAKMAMAMILQNFSFE 642
            D L L+M S  N K+   H     K +S  ++  +  +F FAG ETTS  L +T+  L+ H D Q   ++E+ +   +K P  +D +  ++ + M+  E LRLYP    L R  +K+ ++  + +P  S + + +  +HHD + W +  +EF+PERFS+  +K + +   Y PF  GPR C+G  FAL+  K+A+  I+QNFSF+
Sbjct:  270 DFLQLMMNSHNNSKDKVSH-----KALSDMEITAQSIIFIFAGYETTSSTLSFTLHSLATHPDIQKKLQDEIDEALPNKAPPTYDTVMEMEYLDMVLNETLRLYPIANRLERVCKKDVELNGVYIPKGSTVMIPSYALHHDPQHWSEP-EEFQPERFSKE-NKGSIDPYVYLPFGNGPRNCLGMRFALMNMKLALTKIMQNFSFQ 467          
BLAST of DY258649 vs. ExPASy Swiss-Prot
Match: CP341_MOUSE (Cytochrome P450 3A41 OS=Mus musculus GN=Cyp3a41a PE=2 SV=1)

HSP 1 Score: 121.324 bits (303), Expect = 7.098e-27
Identity = 70/205 (34.15%), Postives = 116/205 (56.59%), Query Frame = 1
Query:   37 DLLGLLMES--NLKEIKEHGNNKLKGISRDDVIDECKLFYFAGQETTSVLLLWTMVLLSKHQDWQAHAREEVLQVFGDKKPD-FDGLNRLKIVQMIFYEVLRLYPPLPVLSRYVEKETKIGDLILPAESVIALQTLLVHHDKKLWGDDAKEFKPERFSEGISKATKNQVSYFPFAWGPRICIGQNFALVEAKMAMAMILQNFSFE 642
            D L L+M +  N K+   H     K +S  ++  +  +F FAG ETTS  L +T+  L+ H D Q   +EE+ +   +K P  +D +  ++ + M+  E LRLYP    L R+ +K+ ++  + +P  S + + +  +HHD + W  + +EF+PERFS+  +K + +   Y PF  GPR CIG  FA +  K+A+  ++QNFSF+
Sbjct:  270 DFLQLMMNAHNNSKDKDSH-----KALSDMEITAQSIVFIFAGYETTSSTLSFTLYCLATHPDIQKKLQEEIDETLPNKAPPTYDTVMEMEYLDMVLNETLRLYPIGNRLERFCKKDVELNGVYIPKGSTVMIPSYALHHDPQHW-PEPEEFQPERFSKE-NKGSIDPYLYMPFGIGPRNCIGMRFAFMTMKLALTKVMQNFSFQ 467          
BLAST of DY258649 vs. ExPASy Swiss-Prot
Match: C13A3_CAEEL (Putative cytochrome P450 CYP13A3 OS=Caenorhabditis elegans GN=cyp-13A3 PE=2 SV=1)

HSP 1 Score: 120.939 bits (302), Expect = 9.270e-27
Identity = 65/181 (35.91%), Postives = 107/181 (59.12%), Query Frame = 1
Query:  103 KGISRDDVIDECKLFYFAGQETTSVLLLWTMVLLSKHQDWQAHAREEVLQVFGDKKPDFDGLNRLKIVQMIFYEVLRLYPPLPVL-SRYVEKETKIGDLILPAESVIALQTLLVHHDKKLWGDDAKEFKPERFSEGISKATKNQVSYFPFAWGPRICIGQNFALVEAKMAMAMILQNFSFE 642
            K ++ D++I +  +F  AG +TT++ L ++  LL++H + Q   +EEV +   D +  FD L++LK ++ +  E LRLYP   ++ +R   K T +  + +   + +   T  +H+D K WG++A EFKPER+  G  +A   + +Y PF  GPRICIG   A +E KM +A IL+ +S E
Sbjct:  309 KHLTFDEIIGQLFVFLLAGYDTTALSLSYSSYLLARHPEIQKKLQEEVDRECPDPEVTFDQLSKLKYMECVIKETLRLYPLASIVHNRKCMKSTTVLGMKIEEGTNVQADTWTLHYDPKFWGENANEFKPERWESGDEQAVA-KGAYLPFGLGPRICIGMRLAYMEEKMLLAQILKKYSLE 488          
The following BLAST results are available for this feature:
BLAST of DY258649 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 460
Match NameE-valueIdentityDescription
C13A2_CAEEL1.095e-2735.91Putative cytochrome P450 CYP13A2 OS=Caenorhabditis... [more]
CP3A6_RABIT3.186e-2735.05Cytochrome P450 3A6 OS=Oryctolagus cuniculus GN=CY... [more]
CP3A7_HUMAN4.161e-2735.21Cytochrome P450 3A7 OS=Homo sapiens GN=CYP3A7 PE=1... [more]
C13AA_CAEEL4.161e-2734.12Putative cytochrome P450 CYP13A10 OS=Caenorhabditi... [more]
CP3AS_BOVIN5.434e-2734.80Cytochrome P450 3A28 OS=Bos taurus GN=CYP3A28 PE=2... [more]
CP3A9_RAT5.434e-2733.95Cytochrome P450 3A9 OS=Rattus norvegicus GN=Cyp3a9... [more]
CP3A2_RAT5.434e-2736.60Cytochrome P450 3A2 OS=Rattus norvegicus GN=Cyp3a2... [more]
CP3AB_MOUSE7.098e-2734.63Cytochrome P450 3A11 OS=Mus musculus GN=Cyp3a11 PE... [more]
CP341_MOUSE7.098e-2734.15Cytochrome P450 3A41 OS=Mus musculus GN=Cyp3a41a P... [more]
C13A3_CAEEL9.270e-2735.91Putative cytochrome P450 CYP13A3 OS=Caenorhabditis... [more]

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Properties
Property NameValue
Genbank descriptionKN0AAI2DC07FM1 AbsDev1 Citrus clementina cDNA 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DY258649 ID=DY258649; Name=DY258649; organism=Citrus clementina; type=EST; length=875bp
GAGATAGCAATGAAAACAGGGGAAGCTGCAAAAGATGACTTATTGGGTTT
ACTTATGGAATCCAATCTCAAAGAAATTAAAGAACATGGAAACAACAAAC
TTAAAGGGATCAGCAGAGACGATGTTATCGATGAGTGTAAGCTATTTTAC
TTTGCTGGGCAAGAGACTACTTCAGTTTTGCTTCTTTGGACAATGGTTTT
GTTGAGCAAGCATCAAGACTGGCAAGCACATGCAAGAGAAGAGGTTTTGC
AAGTCTTTGGTGATAAGAAACCTGACTTCGATGGATTGAATCGCCTCAAA
ATCGTTCAAATGATCTTCTACGAGGTACTCAGGCTGTACCCACCTTTGCC
TGTACTTTCTCGATACGTTGAAAAGGAAACGAAAATCGGGGACTTGATAT
TACCAGCTGAATCAGTGATCGCATTGCAAACTCTCTTGGTTCACCATGAT
AAAAAACTTTGGGGTGACGATGCAAAAGAGTTTAAACCTGAGAGGTTTTC
AGAAGGAATTTCAAAGGCAACAAAAAATCAAGTTTCTTATTTCCCATTTG
CATGGGGTCCTAGAATATGCATTGGGCAAAACTTTGCCCTGGTTGAAGCA
AAAATGGCCATGGCAATGATTCTGCAGAATTTCTCCTTCGAGTTGTCTGC
ATCCTATGTTCATGCTCCTCATGCGTTTATATTCCTCCAGCCACAACATG
GAGCTCACCTGATTTTACGGAAATTATAGAGCTTTATAAACTCTCAGTTG
CAAAATAAAATTCTTATGATCGGAAAACAATGTATCAGTTATGATAATAT
AGTATAAATTTGATAAATTAATACTTGATAAAAAAAAAAAAAAAAAAAAA
CCCAACTTTTCTGGACAAAGTGGGA
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