DY258649

Overview
NameDY258649
Unique NameDY258649
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length875
Libraries
Library NameType
AbsDev1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of DY258649 vs. ExPASy Swiss-Prot
Match: CP4FB_HUMAN (Cytochrome P450 4F11 OS=Homo sapiens GN=CYP4F11 PE=2 SV=2)

HSP 1 Score: 108.997 bits (271), Expect = 3.645e-23
Identity = 60/181 (33.15%), Postives = 107/181 (59.12%), Query Frame = 1
Query:  103 KGISRDDVIDECKLFYFAGQETTSVLLLWTMVLLSKHQDWQAHAREEVLQVFGDKKP---DFDGLNRLKIVQMIFYEVLRLYPPLPVLSRYVEKETKIGD-LILPAESVIALQTLLVHHDKKLWGDDAKEFKPERFSEGISKATKNQVSYFPFAWGPRICIGQNFALVEAKMAMAMILQNF 633
            K +S +D+  E   F F G +TT+  L W +  L+KH ++Q   R+EV ++  D++P   ++D L +L  + M   E LRL+PP+PV+SR   ++  + D  ++P   V  +  + +H++  +W  D + + P RF++   K  ++ +++ PF+ GPR CIGQ FA+ E K+ +A+ L +F
Sbjct:  311 KELSDEDIRAEADTFMFEGHDTTASGLSWVLYHLAKHPEYQEQCRQEVQELLKDREPIEIEWDDLAQLPFLTMCIKESLRLHPPVPVISRCCTQDFVLPDGRVIPKGIVCLINIIGIHYNPTVW-PDPEVYDPFRFNQENIK-ERSPLAFIPFSAGPRNCIGQAFAMAEMKVVLALTLLHF 489          
BLAST of DY258649 vs. ExPASy Swiss-Prot
Match: CP4B1_HUMAN (Cytochrome P450 4B1 OS=Homo sapiens GN=CYP4B1 PE=1 SV=2)

HSP 1 Score: 108.612 bits (270), Expect = 4.761e-23
Identity = 78/236 (33.05%), Postives = 120/236 (50.85%), Query Frame = 1
Query:   34 DDLLGLLMESNLKEIKEHGNNKLKGISRDDVIDECKLFYFAGQETTSVLLLWTMVLLSKHQDWQAHAREEVLQVFGDKKPDF---DGLNRLKIVQMIFYEVLRLYPPLPVLSRYVEKE-TKIGDLILPAESVIALQTLLVHHDKKLWGDDAKEFKPERFS-EGISKATKNQVSYFPFAWGPRICIGQNFALVEAKMAMAMILQNFSFELSASYVHAPHAFIFLQPQHGAHLILRKL 726
            D LLG   E ++K            +S  D+  E   F F G +TT+  + W +  ++ + + Q   REEV ++ GD+  DF   D L ++  + M   E  RLYPP+P + R + K  T +    LPA S+I++    +H +  +W  D + F   RFS E  SK  ++  ++ PF+ GPR CIGQ FA+ E K+  AM L  F F L  S +      + L+ ++G HL L+ L
Sbjct:  287 DILLGARDEDDIK------------LSDADLRAEVDTFMFEGHDTTTSGISWFLYCMALYPEHQHRCREEVREILGDQ--DFFQWDDLGKMTYLTMCIKESFRLYPPVPQVYRQLSKPVTFVDGRSLPAGSLISMHIYALHRNSAVW-PDPEVFDSLRFSTENASK--RHPFAFMPFSAGPRNCIGQQFAMSEMKVVTAMCLLRFEFSLDPSRLPIKMPQLVLRSKNGFHLHLKPL 505          
BLAST of DY258649 vs. ExPASy Swiss-Prot
Match: CYPE_BACSU (Probable bifunctional P-450/NADPH-P450 reductase 2 OS=Bacillus subtilis GN=cypE PE=2 SV=1)

HSP 1 Score: 108.227 bits (269), Expect = 6.218e-23
Identity = 58/164 (35.37%), Postives = 92/164 (56.10%), Query Frame = 1
Query:  145 FYFAGQETTSVLLLWTMVLLSKHQDWQAHAREEVLQVFGDKKPDFDGLNRLKIVQMIFYEVLRLYPPLPVLSRYVEKETKI-GDLILPAESVIALQTLLVHHDKKLWGDDAKEFKPERFSEGISKATKNQVSYFPFAWGPRICIGQNFALVEAKMAMAMILQNF 633
            F  AG ETTS LL + +  L  H +    A+EE  +V  D  P++  + +LK ++M+  E LRLYP  P  S Y +++T + G+  +     + +    +H D+  WG DA++F+PERF +    ++    +Y PF  G R CIG  FAL EA M + ++L++F
Sbjct:  264 FLIAGHETTSGLLSFAIYCLLTHPEKLKKAQEEADRVLTDDTPEYKQIQQLKYIRMVLNETLRLYPTAPAFSLYAKEDTVLGGEYPISKGQPVTVLIPKLHRDQNAWGPDAEDFRPERFED---PSSIPHHAYKPFGNGQRACIGMQFALQEATMVLGLVLKHF 424          
BLAST of DY258649 vs. ExPASy Swiss-Prot
Match: CP4F8_HUMAN (Cytochrome P450 4F8 OS=Homo sapiens GN=CYP4F8 PE=1 SV=1)

HSP 1 Score: 108.227 bits (269), Expect = 6.218e-23
Identity = 59/182 (32.42%), Postives = 103/182 (56.59%), Query Frame = 1
Query:  103 KGISRDDVIDECKLFYFAGQETTSVLLLWTMVLLSKHQDWQAHAREEVLQVFGDKKP---DFDGLNRLKIVQMIFYEVLRLYPPLPVLSRYVEKETKIGD-LILPAESVIALQTLLVHHDKKLWGDDAKEFKPERFS-EGISKATKNQVSYFPFAWGPRICIGQNFALVEAKMAMAMILQNF 633
            K +S +D+  E   F F G +TT+  L W +  L++H ++Q   R+EV ++  D++P   ++D L +L  + M   E LRL+PP+P  +R   ++  + D  ++P  +V  +    +HH+  +W  D + + P RF  E   K  ++ +++ PF+ GPR CIGQ FA+ E K+ +A+ L  F
Sbjct:  311 KELSDEDIRAEADTFMFGGHDTTASGLSWVLYNLARHPEYQERCRQEVQELLKDREPKEIEWDDLAQLPFLTMCLKESLRLHPPIPTFARGCTQDVVLPDSRVIPKGNVCNINIFAIHHNPSVW-PDPEVYDPFRFDPENAQK--RSPMAFIPFSAGPRNCIGQKFAMAEMKVVLALTLLRF 489          
BLAST of DY258649 vs. ExPASy Swiss-Prot
Match: CP4B1_MOUSE (Cytochrome P450 4B1 OS=Mus musculus GN=Cyp4b1 PE=1 SV=1)

HSP 1 Score: 108.227 bits (269), Expect = 6.218e-23
Identity = 74/233 (31.76%), Postives = 116/233 (49.79%), Query Frame = 1
Query:   34 DDLLGLLMESNLKEIKEHGNNKLKGISRDDVIDECKLFYFAGQETTSVLLLWTMVLLSKHQDWQAHAREEVLQVFGDKKP-DFDGLNRLKIVQMIFYEVLRLYPPLPVLSRYVEKE-TKIGDLILPAESVIALQTLLVHHDKKLWGDDAKEFKPERFSEGISKATKNQVSYFPFAWGPRICIGQNFALVEAKMAMAMILQNFSFELSASYVHAPHAFIFLQPQHGAHLILRKL 726
            D LLG   ES +K            +S  D+  E   F F G +TT+  + W +  ++ +   Q   REEV ++ GD+    +D L ++  + M   E  RLYPP+P + R + K  T +    LPA S+I+L    +H +  +W  D + F P RFS   +   ++  ++ PF+ GPR CIGQ FA+ E K+  A+ L  F F    S +      + L+ ++G HL L+ L
Sbjct:  287 DILLGARDESGIK------------LSDADLRAEVDTFMFEGHDTTTSGISWFLYCMALYPMHQQRCREEVREILGDRDSFQWDDLAQMTYLTMCMKECFRLYPPVPQVYRQLSKPVTFVDGRSLPAGSLISLHIYALHRNSAVW-PDPEVFDPLRFSPE-NMTGRHPFAFMPFSAGPRNCIGQQFAMNEMKVVTALCLLRFEFSPDPSKIPIKVPQLILRSKNGIHLYLKPL 505          
BLAST of DY258649 vs. ExPASy Swiss-Prot
Match: C4D21_DROME (Probable cytochrome P450 4d21 OS=Drosophila melanogaster GN=Cyp4d21 PE=3 SV=1)

HSP 1 Score: 108.227 bits (269), Expect = 6.218e-23
Identity = 67/227 (29.52%), Postives = 120/227 (52.86%), Query Frame = 1
Query:   19 GEAAKDDLLGLLMESNLKEIKEHGNNKLKGISRDDVIDECKLFYFAGQETTSVLLLWTMVLLSKHQDWQAHAREEVLQVFGDKKPDFDG------LNRLKIVQMIFYEVLRLYPPLPVLSRYVEKETKIGDLILPAESVIALQTLLVHHDKKLWGDDAKEFKPERFSEGISKATKNQVSYFPFAWGPRICIGQNFALVEAKMAMAMILQNFSFELSASYVHAPHAFI 681
            G  AK  LL +L+++ +           K +S  D+ +E  +F FAG +TT+  +   +  +S+H   Q    EE++ V G   PD D       L  LK +  +  E +RL+PP+P+L RY+ ++ KIG++ +P  + I L    V+ D + +  D   FKPER+ +  + +    ++Y PF+ GP+ CIGQ FA ++ K  ++ +++++      + + A + FI
Sbjct:  280 GGKAKMTLLDILLQATIDN---------KPLSDVDIREEVDVFIFAGDDTTTSGVSHALHAISRHPKVQECIYEELVSVLG---PDPDASVTQTKLLELKYLDCVIKETMRLHPPVPILGRYIPEDLKIGEITIPGNTSILLMPYYVYRDPEYF-PDPLVFKPERWMDMKTTSNTPPLAYIPFSSGPKNCIGQKFANLQMKALISKVIRHYELLPLGADLKATYTFI 493          
BLAST of DY258649 vs. ExPASy Swiss-Prot
Match: CP4C3_DROME (Cytochrome P450 4c3 OS=Drosophila melanogaster GN=Cyp4c3 PE=2 SV=1)

HSP 1 Score: 107.842 bits (268), Expect = 8.121e-23
Identity = 56/181 (30.94%), Postives = 102/181 (56.35%), Query Frame = 1
Query:  109 ISRDDVIDECKLFYFAGQETTSVLLLWTMVLLSKHQDWQAHAREEVLQVFGDKK---PDFDGLNRLKIVQMIFYEVLRLYPPLPVLSRYVEKETKIGDLILPAESVIALQTLLVHHDKKLWGDDAKEFKPERFSEGISKATKNQVSYFPFAWGPRICIGQNFALVEAKMAMAMILQNFSFE 642
            +S +D+ +E   F F G +TTS  + WT+ LL  H ++Q    EE+  +FGD K        L  ++ ++    + LRL+P +P+++R V ++  IG  I+PA +   + T  +H + +++    ++F P+ F    + A ++  +Y PF+ GPR CIGQ FA++E K  ++ +L+ +  E
Sbjct:  327 LSNEDIREEVDTFMFEGHDTTSAAISWTLFLLGCHPEYQERVVEELDSIFGDDKETPATMKNLMDMRYLECCIKDSLRLFPSVPMMARMVGEDVNIGGKIVPAGTQAIIMTYALHRNPRVF-PKPEQFNPDNFLPE-NCAGRHPFAYIPFSAGPRNCIGQKFAILEEKAVISTVLRKYKIE 505          
BLAST of DY258649 vs. ExPASy Swiss-Prot
Match: CP4F3_RAT (Leukotriene-B(4) omega-hydroxylase 2 OS=Rattus norvegicus GN=Cyp4f3 PE=2 SV=1)

HSP 1 Score: 107.457 bits (267), Expect = 1.061e-22
Identity = 68/214 (31.78%), Postives = 114/214 (53.27%), Query Frame = 1
Query:    7 AMKTGEAAKD-DLLGLLMESNLKEIKEHGNNKLKGISRDDVIDECKLFYFAGQETTSVLLLWTMVLLSKHQDWQAHAREEVLQVFGDKKP---DFDGLNRLKIVQMIFYEVLRLYPPLPVLSRYVEKETKIGD-LILPAESVIALQTLLVHHDKKLWGDDAKEFKPERFSEGISKATKNQVSYFPFAWGPRICIGQNFALVEAKMAMAMILQNF 633
            A+K    AK  D + +L+ S      EHG    + +S +D+  E   F F G +TT+  L W +  L+KH ++Q   R+EV ++  D++P   ++D L +L  + M   E LRL+PP   +SR   ++  + D  ++P   +  +     HH+  +W  D + + P RF     K  ++ +++ PF+ GPR CIGQ FA+ E K+A+A+ L  F
Sbjct:  286 ALKAKAKAKTLDFIDVLLLSK----DEHG----EALSDEDIRAEADTFMFGGHDTTASGLSWILYNLAKHPEYQERCRQEVRELLRDREPEEIEWDDLAQLPFLTMCIKESLRLHPPATAISRCCTQDIMLPDGRVIPKGVICRISIFGTHHNPAVW-PDPEVYNPFRFDADNGKG-RSPLAFIPFSAGPRNCIGQTFAMSEMKVALALTLLRF 489          
BLAST of DY258649 vs. ExPASy Swiss-Prot
Match: CP46A_HUMAN (Cholesterol 24-hydroxylase OS=Homo sapiens GN=CYP46A1 PE=1 SV=1)

HSP 1 Score: 107.457 bits (267), Expect = 1.061e-22
Identity = 72/214 (33.64%), Postives = 113/214 (52.80%), Query Frame = 1
Query:    7 AMKTGEAAKDDLLGLLMESNLKEIKEHGNNKLKGISRDDVIDECKLFYFAGQETTSVLLLWTMVLLSKHQDWQAHAREEVLQVFGDKKP-DFDGLNRLKIVQMIFYEVLRLYPPLPVLSRYVEKETKIGDLILPAESVIALQTLLVHHDKKLWGDDAKEFKPERFSEGISKATKNQVSYFPFAWGPRICIGQNFALVEAKMAMAMILQNFSFEL 645
            A+K GE    D+L  ++++      E G    +G+     +D    F+ AG ET++  L +T++ LS+  +  A  + EV +V G K+  DF+ L RL+ +  +  E LRLYPP     R +E+ET I  + +P  + +   T ++      + +D   F P+RF  G   A K + +YFPF+ G R CIGQ FA +E K+ MA +LQ   F L
Sbjct:  264 ALKRGEEVPADILTQILKA------EEGAQDDEGL-----LDNFVTFFIAGHETSANHLAFTVMELSRQPEIVARLQAEVDEVIGSKRYLDFEDLGRLQYLSQVLKESLRLYPPAWGTFRLLEEETLIDGVRVPGNTPLLFSTYVMGR-MDTYFEDPLTFNPDRFGPG---APKPRFTYFPFSLGHRSCIGQQFAQMEVKVVMAKLLQRLEFRL 462          
BLAST of DY258649 vs. ExPASy Swiss-Prot
Match: CP134_DROME (Probable cytochrome P450 313a4 OS=Drosophila melanogaster GN=Cyp313a4 PE=2 SV=4)

HSP 1 Score: 107.457 bits (267), Expect = 1.061e-22
Identity = 58/180 (32.22%), Postives = 102/180 (56.67%), Query Frame = 1
Query:  121 DVIDECKLFYFAGQETTSVLLLWTMVLLSKHQDWQAHAREEVLQVF---GDKKPDFDGLNRLKIVQMIFYEVLRLYPPLPVLSRYVEKETKIGD-LILPAESVIALQTLLVHHDKKLWGDDAKEFKPERFSEGISKATKNQVSYFPFAWGPRICIGQNFALVEAKMAMAMILQNFSFELS 648
            +V DE  +  F   ETT+  + +T++LL+   ++Q  A EE+  +F   GD    +    ++  + +I  E +R+ PP+PV+SR   ++ K+ + +++P    IA+    +H  KK+WG DA+ F P+ F    +   K+  +Y PF  G R CIG  +AL+ AK+ +A +L+N+ F+ S
Sbjct:  288 NVEDESNIIVFGAFETTANAVYYTLMLLAMFPEYQERAFEEIKTIFPNTGDFDVSYADTQQMVYLDLILNESMRVIPPVPVVSRQTSQDLKLSNGIVVPKGVQIAIDIYHMHRSKKIWGPDAETFNPDHFLPH-NIQDKHPYAYIPFTKGIRNCIGWRYALISAKVTLAKLLRNYRFKTS 466          
The following BLAST results are available for this feature:
BLAST of DY258649 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 460
Match NameE-valueIdentityDescription
CP4FB_HUMAN3.645e-2333.15Cytochrome P450 4F11 OS=Homo sapiens GN=CYP4F11 PE... [more]
CP4B1_HUMAN4.761e-2333.05Cytochrome P450 4B1 OS=Homo sapiens GN=CYP4B1 PE=1... [more]
CYPE_BACSU6.218e-2335.37Probable bifunctional P-450/NADPH-P450 reductase 2... [more]
CP4F8_HUMAN6.218e-2332.42Cytochrome P450 4F8 OS=Homo sapiens GN=CYP4F8 PE=1... [more]
CP4B1_MOUSE6.218e-2331.76Cytochrome P450 4B1 OS=Mus musculus GN=Cyp4b1 PE=1... [more]
C4D21_DROME6.218e-2329.52Probable cytochrome P450 4d21 OS=Drosophila melano... [more]
CP4C3_DROME8.121e-2330.94Cytochrome P450 4c3 OS=Drosophila melanogaster GN=... [more]
CP4F3_RAT1.061e-2231.78Leukotriene-B(4) omega-hydroxylase 2 OS=Rattus nor... [more]
CP46A_HUMAN1.061e-2233.64Cholesterol 24-hydroxylase OS=Homo sapiens GN=CYP4... [more]
CP134_DROME1.061e-2232.22Probable cytochrome P450 313a4 OS=Drosophila melan... [more]

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Properties
Property NameValue
Genbank descriptionKN0AAI2DC07FM1 AbsDev1 Citrus clementina cDNA 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DY258649 ID=DY258649; Name=DY258649; organism=Citrus clementina; type=EST; length=875bp
GAGATAGCAATGAAAACAGGGGAAGCTGCAAAAGATGACTTATTGGGTTT
ACTTATGGAATCCAATCTCAAAGAAATTAAAGAACATGGAAACAACAAAC
TTAAAGGGATCAGCAGAGACGATGTTATCGATGAGTGTAAGCTATTTTAC
TTTGCTGGGCAAGAGACTACTTCAGTTTTGCTTCTTTGGACAATGGTTTT
GTTGAGCAAGCATCAAGACTGGCAAGCACATGCAAGAGAAGAGGTTTTGC
AAGTCTTTGGTGATAAGAAACCTGACTTCGATGGATTGAATCGCCTCAAA
ATCGTTCAAATGATCTTCTACGAGGTACTCAGGCTGTACCCACCTTTGCC
TGTACTTTCTCGATACGTTGAAAAGGAAACGAAAATCGGGGACTTGATAT
TACCAGCTGAATCAGTGATCGCATTGCAAACTCTCTTGGTTCACCATGAT
AAAAAACTTTGGGGTGACGATGCAAAAGAGTTTAAACCTGAGAGGTTTTC
AGAAGGAATTTCAAAGGCAACAAAAAATCAAGTTTCTTATTTCCCATTTG
CATGGGGTCCTAGAATATGCATTGGGCAAAACTTTGCCCTGGTTGAAGCA
AAAATGGCCATGGCAATGATTCTGCAGAATTTCTCCTTCGAGTTGTCTGC
ATCCTATGTTCATGCTCCTCATGCGTTTATATTCCTCCAGCCACAACATG
GAGCTCACCTGATTTTACGGAAATTATAGAGCTTTATAAACTCTCAGTTG
CAAAATAAAATTCTTATGATCGGAAAACAATGTATCAGTTATGATAATAT
AGTATAAATTTGATAAATTAATACTTGATAAAAAAAAAAAAAAAAAAAAA
CCCAACTTTTCTGGACAAAGTGGGA
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