DY258650

Overview
NameDY258650
Unique NameDY258650
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length826
Libraries
Library NameType
AbsDev1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of DY258650 vs. ExPASy Swiss-Prot
Match: PP1B_PIG (Serine/threonine-protein phosphatase PP1-beta catalytic subunit OS=Sus scrofa GN=PPP1CB PE=1 SV=3)

HSP 1 Score: 251.136 bits (640), Expect = 5.419e-66
Identity = 117/149 (78.52%), Postives = 130/149 (87.25%), Query Frame = 3
Query:    6 CMHGGLSPDLKNLDQIRNIARPVDVPDQGLLCDLLWADPDKDIEGWGENDRGVSYTFGADKVVEFLQKHDLDLICRAHQVVEDGYEFFAKRQLVTVFSAPNYCGEFDNAGAMMSVDDTLTCSFQILKASEKKGKVGFGN-NMLRPGTPP 449
            C HGGLSPDL++++QIR I RP DVPD GLLCDLLW+DPDKD++GWGENDRGVS+TFGAD V +FL +HDLDLICRAHQVVEDGYEFFAKRQLVT+FSAPNYCGEFDNAG MMSVD+TL CSFQILK SEKK K  +G  N  RP TPP
Sbjct:  170 CCHGGLSPDLQSMEQIRRIMRPTDVPDTGLLCDLLWSDPDKDVQGWGENDRGVSFTFGADVVSKFLNRHDLDLICRAHQVVEDGYEFFAKRQLVTLFSAPNYCGEFDNAGGMMSVDETLMCSFQILKPSEKKAKYQYGGLNSGRPVTPP 318          
BLAST of DY258650 vs. ExPASy Swiss-Prot
Match: PP1B_MOUSE (Serine/threonine-protein phosphatase PP1-beta catalytic subunit OS=Mus musculus GN=Ppp1cb PE=1 SV=3)

HSP 1 Score: 251.136 bits (640), Expect = 5.419e-66
Identity = 117/149 (78.52%), Postives = 130/149 (87.25%), Query Frame = 3
Query:    6 CMHGGLSPDLKNLDQIRNIARPVDVPDQGLLCDLLWADPDKDIEGWGENDRGVSYTFGADKVVEFLQKHDLDLICRAHQVVEDGYEFFAKRQLVTVFSAPNYCGEFDNAGAMMSVDDTLTCSFQILKASEKKGKVGFGN-NMLRPGTPP 449
            C HGGLSPDL++++QIR I RP DVPD GLLCDLLW+DPDKD++GWGENDRGVS+TFGAD V +FL +HDLDLICRAHQVVEDGYEFFAKRQLVT+FSAPNYCGEFDNAG MMSVD+TL CSFQILK SEKK K  +G  N  RP TPP
Sbjct:  170 CCHGGLSPDLQSMEQIRRIMRPTDVPDTGLLCDLLWSDPDKDVQGWGENDRGVSFTFGADVVSKFLNRHDLDLICRAHQVVEDGYEFFAKRQLVTLFSAPNYCGEFDNAGGMMSVDETLMCSFQILKPSEKKAKYQYGGLNSGRPVTPP 318          
BLAST of DY258650 vs. ExPASy Swiss-Prot
Match: PP1B_HUMAN (Serine/threonine-protein phosphatase PP1-beta catalytic subunit OS=Homo sapiens GN=PPP1CB PE=1 SV=3)

HSP 1 Score: 251.136 bits (640), Expect = 5.419e-66
Identity = 117/149 (78.52%), Postives = 130/149 (87.25%), Query Frame = 3
Query:    6 CMHGGLSPDLKNLDQIRNIARPVDVPDQGLLCDLLWADPDKDIEGWGENDRGVSYTFGADKVVEFLQKHDLDLICRAHQVVEDGYEFFAKRQLVTVFSAPNYCGEFDNAGAMMSVDDTLTCSFQILKASEKKGKVGFGN-NMLRPGTPP 449
            C HGGLSPDL++++QIR I RP DVPD GLLCDLLW+DPDKD++GWGENDRGVS+TFGAD V +FL +HDLDLICRAHQVVEDGYEFFAKRQLVT+FSAPNYCGEFDNAG MMSVD+TL CSFQILK SEKK K  +G  N  RP TPP
Sbjct:  170 CCHGGLSPDLQSMEQIRRIMRPTDVPDTGLLCDLLWSDPDKDVQGWGENDRGVSFTFGADVVSKFLNRHDLDLICRAHQVVEDGYEFFAKRQLVTLFSAPNYCGEFDNAGGMMSVDETLMCSFQILKPSEKKAKYQYGGLNSGRPVTPP 318          
BLAST of DY258650 vs. ExPASy Swiss-Prot
Match: PP1B_CHICK (Serine/threonine-protein phosphatase PP1-beta catalytic subunit OS=Gallus gallus GN=PPP1CB PE=1 SV=3)

HSP 1 Score: 251.136 bits (640), Expect = 5.419e-66
Identity = 117/149 (78.52%), Postives = 130/149 (87.25%), Query Frame = 3
Query:    6 CMHGGLSPDLKNLDQIRNIARPVDVPDQGLLCDLLWADPDKDIEGWGENDRGVSYTFGADKVVEFLQKHDLDLICRAHQVVEDGYEFFAKRQLVTVFSAPNYCGEFDNAGAMMSVDDTLTCSFQILKASEKKGKVGFGN-NMLRPGTPP 449
            C HGGLSPDL++++QIR I RP DVPD GLLCDLLW+DPDKD++GWGENDRGVS+TFGAD V +FL +HDLDLICRAHQVVEDGYEFFAKRQLVT+FSAPNYCGEFDNAG MMSVD+TL CSFQILK SEKK K  +G  N  RP TPP
Sbjct:  170 CCHGGLSPDLQSMEQIRRIMRPTDVPDTGLLCDLLWSDPDKDVQGWGENDRGVSFTFGADVVSKFLNRHDLDLICRAHQVVEDGYEFFAKRQLVTLFSAPNYCGEFDNAGGMMSVDETLMCSFQILKPSEKKAKYQYGGLNSGRPVTPP 318          
BLAST of DY258650 vs. ExPASy Swiss-Prot
Match: PP1B_BOVIN (Serine/threonine-protein phosphatase PP1-beta catalytic subunit OS=Bos taurus GN=PPP1CB PE=2 SV=1)

HSP 1 Score: 251.136 bits (640), Expect = 5.419e-66
Identity = 117/149 (78.52%), Postives = 130/149 (87.25%), Query Frame = 3
Query:    6 CMHGGLSPDLKNLDQIRNIARPVDVPDQGLLCDLLWADPDKDIEGWGENDRGVSYTFGADKVVEFLQKHDLDLICRAHQVVEDGYEFFAKRQLVTVFSAPNYCGEFDNAGAMMSVDDTLTCSFQILKASEKKGKVGFGN-NMLRPGTPP 449
            C HGGLSPDL++++QIR I RP DVPD GLLCDLLW+DPDKD++GWGENDRGVS+TFGAD V +FL +HDLDLICRAHQVVEDGYEFFAKRQLVT+FSAPNYCGEFDNAG MMSVD+TL CSFQILK SEKK K  +G  N  RP TPP
Sbjct:  170 CCHGGLSPDLQSMEQIRRIMRPTDVPDTGLLCDLLWSDPDKDVQGWGENDRGVSFTFGADVVSKFLNRHDLDLICRAHQVVEDGYEFFAKRQLVTLFSAPNYCGEFDNAGGMMSVDETLMCSFQILKPSEKKAKYQYGGLNSGRPVTPP 318          
BLAST of DY258650 vs. ExPASy Swiss-Prot
Match: PP1_ORYSJ (Serine/threonine-protein phosphatase PP1 OS=Oryza sativa subsp. japonica GN=Os03g0268000 PE=2 SV=2)

HSP 1 Score: 249.21 bits (635), Expect = 2.059e-65
Identity = 114/142 (80.28%), Postives = 127/142 (89.44%), Query Frame = 3
Query:    3 LCMHGGLSPDLKNLDQIRNIARPVDVPDQGLLCDLLWADPDKDIEGWGENDRGVSYTFGADKVVEFLQKHDLDLICRAHQVVEDGYEFFAKRQLVTVFSAPNYCGEFDNAGAMMSVDDTLTCSFQILKASEKKGKVGFGNNM 428
            LCMHGGLSPDL +LD+I+++ RP DVPD GLLCDLLW+DP KD++GWG NDRGVSYTFGADKV EFL+KHDLDLICRAHQVVEDGYEFFA RQLVT+FSAPNYCGEFDNAGAMMSVD+TL CSFQILK +E+KGK    N M
Sbjct:  181 LCMHGGLSPDLTHLDEIKSLPRPTDVPDTGLLCDLLWSDPGKDVQGWGMNDRGVSYTFGADKVSEFLEKHDLDLICRAHQVVEDGYEFFADRQLVTIFSAPNYCGEFDNAGAMMSVDETLMCSFQILKPAERKGKFMASNKM 322          
BLAST of DY258650 vs. ExPASy Swiss-Prot
Match: PP1B_CANFA (Serine/threonine-protein phosphatase PP1-beta catalytic subunit OS=Canis familiaris GN=PPP1CB PE=2 SV=3)

HSP 1 Score: 248.825 bits (634), Expect = 2.689e-65
Identity = 116/149 (77.85%), Postives = 129/149 (86.58%), Query Frame = 3
Query:    6 CMHGGLSPDLKNLDQIRNIARPVDVPDQGLLCDLLWADPDKDIEGWGENDRGVSYTFGADKVVEFLQKHDLDLICRAHQVVEDGYEFFAKRQLVTVFSAPNYCGEFDNAGAMMSVDDTLTCSFQILKASEKKGKVGFGN-NMLRPGTPP 449
            C HGGLSPDL++++QIR I RP DVPD GLLCDLLW+DPDKD++GWGENDRGVS+TFGAD V +FL +HDLDLICRAHQVVEDGYEFFAKRQLV +FSAPNYCGEFDNAG MMSVD+TL CSFQILK SEKK K  +G  N  RP TPP
Sbjct:  170 CCHGGLSPDLQSMEQIRRIMRPTDVPDTGLLCDLLWSDPDKDVQGWGENDRGVSFTFGADVVSKFLNRHDLDLICRAHQVVEDGYEFFAKRQLVILFSAPNYCGEFDNAGGMMSVDETLMCSFQILKPSEKKAKYQYGGLNSGRPVTPP 318          
BLAST of DY258650 vs. ExPASy Swiss-Prot
Match: PP1G_RAT (Serine/threonine-protein phosphatase PP1-gamma catalytic subunit OS=Rattus norvegicus GN=Ppp1cc PE=1 SV=1)

HSP 1 Score: 246.514 bits (628), Expect = 1.335e-64
Identity = 116/148 (78.38%), Postives = 128/148 (86.49%), Query Frame = 3
Query:    6 CMHGGLSPDLKNLDQIRNIARPVDVPDQGLLCDLLWADPDKDIEGWGENDRGVSYTFGADKVVEFLQKHDLDLICRAHQVVEDGYEFFAKRQLVTVFSAPNYCGEFDNAGAMMSVDDTLTCSFQILKASEKKGKVGFGNNMLRPGTPP 449
            C HGGLSPDL++++QIR I RP DVPDQGLLCDLLW+DPDKD+ GWGENDRGVS+TFGA+ V +FL KHDLDLICRAHQVVEDGYEFFAKRQLVT+FSAPNYCGEFDNAGAMMSVD+TL CSFQILK +EKK       N  RP TPP
Sbjct:  171 CCHGGLSPDLQSMEQIRRIMRPTDVPDQGLLCDLLWSDPDKDVLGWGENDRGVSFTFGAEVVAKFLHKHDLDLICRAHQVVEDGYEFFAKRQLVTLFSAPNYCGEFDNAGAMMSVDETLMCSFQILKPAEKKKP-----NATRPVTPP 313          
BLAST of DY258650 vs. ExPASy Swiss-Prot
Match: PP1G_MOUSE (Serine/threonine-protein phosphatase PP1-gamma catalytic subunit OS=Mus musculus GN=Ppp1cc PE=1 SV=1)

HSP 1 Score: 246.514 bits (628), Expect = 1.335e-64
Identity = 116/148 (78.38%), Postives = 128/148 (86.49%), Query Frame = 3
Query:    6 CMHGGLSPDLKNLDQIRNIARPVDVPDQGLLCDLLWADPDKDIEGWGENDRGVSYTFGADKVVEFLQKHDLDLICRAHQVVEDGYEFFAKRQLVTVFSAPNYCGEFDNAGAMMSVDDTLTCSFQILKASEKKGKVGFGNNMLRPGTPP 449
            C HGGLSPDL++++QIR I RP DVPDQGLLCDLLW+DPDKD+ GWGENDRGVS+TFGA+ V +FL KHDLDLICRAHQVVEDGYEFFAKRQLVT+FSAPNYCGEFDNAGAMMSVD+TL CSFQILK +EKK       N  RP TPP
Sbjct:  171 CCHGGLSPDLQSMEQIRRIMRPTDVPDQGLLCDLLWSDPDKDVLGWGENDRGVSFTFGAEVVAKFLHKHDLDLICRAHQVVEDGYEFFAKRQLVTLFSAPNYCGEFDNAGAMMSVDETLMCSFQILKPAEKKKP-----NATRPVTPP 313          
BLAST of DY258650 vs. ExPASy Swiss-Prot
Match: PP1G_HUMAN (Serine/threonine-protein phosphatase PP1-gamma catalytic subunit OS=Homo sapiens GN=PPP1CC PE=1 SV=1)

HSP 1 Score: 246.514 bits (628), Expect = 1.335e-64
Identity = 116/148 (78.38%), Postives = 128/148 (86.49%), Query Frame = 3
Query:    6 CMHGGLSPDLKNLDQIRNIARPVDVPDQGLLCDLLWADPDKDIEGWGENDRGVSYTFGADKVVEFLQKHDLDLICRAHQVVEDGYEFFAKRQLVTVFSAPNYCGEFDNAGAMMSVDDTLTCSFQILKASEKKGKVGFGNNMLRPGTPP 449
            C HGGLSPDL++++QIR I RP DVPDQGLLCDLLW+DPDKD+ GWGENDRGVS+TFGA+ V +FL KHDLDLICRAHQVVEDGYEFFAKRQLVT+FSAPNYCGEFDNAGAMMSVD+TL CSFQILK +EKK       N  RP TPP
Sbjct:  171 CCHGGLSPDLQSMEQIRRIMRPTDVPDQGLLCDLLWSDPDKDVLGWGENDRGVSFTFGAEVVAKFLHKHDLDLICRAHQVVEDGYEFFAKRQLVTLFSAPNYCGEFDNAGAMMSVDETLMCSFQILKPAEKKKP-----NATRPVTPP 313          
The following BLAST results are available for this feature:
BLAST of DY258650 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 189
Match NameE-valueIdentityDescription
PP1B_PIG5.419e-6678.52Serine/threonine-protein phosphatase PP1-beta cata... [more]
PP1B_MOUSE5.419e-6678.52Serine/threonine-protein phosphatase PP1-beta cata... [more]
PP1B_HUMAN5.419e-6678.52Serine/threonine-protein phosphatase PP1-beta cata... [more]
PP1B_CHICK5.419e-6678.52Serine/threonine-protein phosphatase PP1-beta cata... [more]
PP1B_BOVIN5.419e-6678.52Serine/threonine-protein phosphatase PP1-beta cata... [more]
PP1_ORYSJ2.059e-6580.28Serine/threonine-protein phosphatase PP1 OS=Oryza ... [more]
PP1B_CANFA2.689e-6577.85Serine/threonine-protein phosphatase PP1-beta cata... [more]
PP1G_RAT1.335e-6478.38Serine/threonine-protein phosphatase PP1-gamma cat... [more]
PP1G_MOUSE1.335e-6478.38Serine/threonine-protein phosphatase PP1-gamma cat... [more]
PP1G_HUMAN1.335e-6478.38Serine/threonine-protein phosphatase PP1-gamma cat... [more]

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Properties
Property NameValue
Genbank descriptionKN0AAI2DC08FM1 AbsDev1 Citrus clementina cDNA 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DY258650 ID=DY258650; Name=DY258650; organism=Citrus clementina; type=EST; length=826bp
TTCTATGTATGCATGGTGGGTTATCTCCTGATTTGAAAAATTTGGATCAG
ATCAGGAATATTGCTCGCCCTGTTGATGTGCCAGATCAGGGCCTTCTTTG
TGATTTGTTGTGGGCTGATCCTGACAAAGATATTGAGGGCTGGGGAGAGA
ATGACAGGGGTGTGTCCTACACCTTTGGGGCTGACAAGGTTGTTGAATTC
CTTCAGAAGCATGACCTTGATCTTATCTGTCGAGCTCATCAGGTTGTGGA
AGATGGTTATGAATTTTTTGCAAAGCGTCAGCTTGTGACTGTATTCTCTG
CACCAAATTACTGTGGCGAATTTGATAATGCCGGTGCCATGATGAGTGTG
GATGATACATTGACATGCTCCTTTCAGATCCTTAAGGCGTCTGAGAAGAA
AGGAAAAGTTGGATTTGGCAATAACATGTTGAGACCCGGAACTCCTCCCC
ATAAGGGTGGGAAGGGGTGATTGGATTGATTTGACTGATACCAATGATCT
GAAGGATGAAGGGCATAGTTCATATCCTGGCTTTCTGTACTTGTTTGGTT
GGCGTGACTAGTCGCAGAGTCAGTCAAGCCTTTTTGGGCACTTAAGAAGG
GATGTCAAGACATGAGAGTTTCTGCAACGGTGTGTGACGATAGCTGAGTT
ATTAATTGCAGTAAAACCTGTGGTCTTTGTTTTTTCATCATGTAAAATGG
GAATTCTAACTTCATAATGCTGAATTGCACCATTGGTGTAGATGCACTAT
TTTTGTTTTCTCTGTTTTCATTTTCATTTTGTTGTAGTTTGTTAATTATC
CTGCTAATCCAATGCAAATTGATTTT
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