DY258650

Overview
NameDY258650
Unique NameDY258650
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length826
Libraries
Library NameType
AbsDev1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Ccv1_Contig1192 contig Ccv1_Contig1192:1..826. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
[Close]
BLAST of DY258650 vs. ExPASy Swiss-Prot
Match: PP1G_BOVIN (Serine/threonine-protein phosphatase PP1-gamma catalytic subunit OS=Bos taurus GN=PPP1CC PE=2 SV=1)

HSP 1 Score: 246.514 bits (628), Expect = 1.335e-64
Identity = 116/148 (78.38%), Postives = 128/148 (86.49%), Query Frame = 3 
Query:    6 CMHGGLSPDLKNLDQIRNIARPVDVPDQGLLCDLLWADPDKDIEGWGENDRGVSYTFGADKVVEFLQKHDLDLICRAHQVVEDGYEFFAKRQLVTVFSAPNYCGEFDNAGAMMSVDDTLTCSFQILKASEKKGKVGFGNNMLRPGTPP 449
            C HGGLSPDL++++QIR I RP DVPDQGLLCDLLW+DPDKD+ GWGENDRGVS+TFGA+ V +FL KHDLDLICRAHQVVEDGYEFFAKRQLVT+FSAPNYCGEFDNAGAMMSVD+TL CSFQILK +EKK       N  RP TPP
Sbjct:  171 CCHGGLSPDLQSMEQIRRIMRPTDVPDQGLLCDLLWSDPDKDVLGWGENDRGVSFTFGAEVVAKFLHKHDLDLICRAHQVVEDGYEFFAKRQLVTLFSAPNYCGEFDNAGAMMSVDETLMCSFQILKPAEKKKP-----NATRPVTPP 313
[Close]
BLAST of DY258650 vs. ExPASy Swiss-Prot
Match: PP1A_RAT (Serine/threonine-protein phosphatase PP1-alpha catalytic subunit OS=Rattus norvegicus GN=Ppp1ca PE=1 SV=1)

HSP 1 Score: 246.514 bits (628), Expect = 1.335e-64
Identity = 117/152 (76.97%), Postives = 133/152 (87.50%), Query Frame = 3 
Query:    6 CMHGGLSPDLKNLDQIRNIARPVDVPDQGLLCDLLWADPDKDIEGWGENDRGVSYTFGADKVVEFLQKHDLDLICRAHQVVEDGYEFFAKRQLVTVFSAPNYCGEFDNAGAMMSVDDTLTCSFQILKASEK-KGKVGFGNNML---RPGTPP 449
            C HGGLSPDL++++QIR I RP DVPDQGLLCDLLW+DPDKD++GWGENDRGVS+TFGA+ V +FL KHDLDLICRAHQVVEDGYEFFAKRQLVT+FSAPNYCGEFDNAGAMMSVD+TL CSFQILK ++K KGK G  + +    RP TPP
Sbjct:  171 CCHGGLSPDLQSMEQIRRIMRPTDVPDQGLLCDLLWSDPDKDVQGWGENDRGVSFTFGAEVVAKFLHKHDLDLICRAHQVVEDGYEFFAKRQLVTLFSAPNYCGEFDNAGAMMSVDETLMCSFQILKPADKNKGKYGQFSGLNPGGRPITPP 322
[Close]
BLAST of DY258650 vs. ExPASy Swiss-Prot
Match: PP1A_RABIT (Serine/threonine-protein phosphatase PP1-alpha catalytic subunit OS=Oryctolagus cuniculus GN=PPP1CA PE=1 SV=1)

HSP 1 Score: 246.514 bits (628), Expect = 1.335e-64
Identity = 117/152 (76.97%), Postives = 133/152 (87.50%), Query Frame = 3 
Query:    6 CMHGGLSPDLKNLDQIRNIARPVDVPDQGLLCDLLWADPDKDIEGWGENDRGVSYTFGADKVVEFLQKHDLDLICRAHQVVEDGYEFFAKRQLVTVFSAPNYCGEFDNAGAMMSVDDTLTCSFQILKASEK-KGKVGFGNNML---RPGTPP 449
            C HGGLSPDL++++QIR I RP DVPDQGLLCDLLW+DPDKD++GWGENDRGVS+TFGA+ V +FL KHDLDLICRAHQVVEDGYEFFAKRQLVT+FSAPNYCGEFDNAGAMMSVD+TL CSFQILK ++K KGK G  + +    RP TPP
Sbjct:  171 CCHGGLSPDLQSMEQIRRIMRPTDVPDQGLLCDLLWSDPDKDVQGWGENDRGVSFTFGAEVVAKFLHKHDLDLICRAHQVVEDGYEFFAKRQLVTLFSAPNYCGEFDNAGAMMSVDETLMCSFQILKPADKNKGKYGQFSGLNPGGRPITPP 322
[Close]
BLAST of DY258650 vs. ExPASy Swiss-Prot
Match: PP1A_MOUSE (Serine/threonine-protein phosphatase PP1-alpha catalytic subunit OS=Mus musculus GN=Ppp1ca PE=1 SV=1)

HSP 1 Score: 246.514 bits (628), Expect = 1.335e-64
Identity = 117/152 (76.97%), Postives = 133/152 (87.50%), Query Frame = 3 
Query:    6 CMHGGLSPDLKNLDQIRNIARPVDVPDQGLLCDLLWADPDKDIEGWGENDRGVSYTFGADKVVEFLQKHDLDLICRAHQVVEDGYEFFAKRQLVTVFSAPNYCGEFDNAGAMMSVDDTLTCSFQILKASEK-KGKVGFGNNML---RPGTPP 449
            C HGGLSPDL++++QIR I RP DVPDQGLLCDLLW+DPDKD++GWGENDRGVS+TFGA+ V +FL KHDLDLICRAHQVVEDGYEFFAKRQLVT+FSAPNYCGEFDNAGAMMSVD+TL CSFQILK ++K KGK G  + +    RP TPP
Sbjct:  171 CCHGGLSPDLQSMEQIRRIMRPTDVPDQGLLCDLLWSDPDKDVQGWGENDRGVSFTFGAEVVAKFLHKHDLDLICRAHQVVEDGYEFFAKRQLVTLFSAPNYCGEFDNAGAMMSVDETLMCSFQILKPADKNKGKYGQFSGLNPGGRPITPP 322
[Close]
BLAST of DY258650 vs. ExPASy Swiss-Prot
Match: PP1A_HUMAN (Serine/threonine-protein phosphatase PP1-alpha catalytic subunit OS=Homo sapiens GN=PPP1CA PE=1 SV=1)

HSP 1 Score: 246.514 bits (628), Expect = 1.335e-64
Identity = 117/152 (76.97%), Postives = 133/152 (87.50%), Query Frame = 3 
Query:    6 CMHGGLSPDLKNLDQIRNIARPVDVPDQGLLCDLLWADPDKDIEGWGENDRGVSYTFGADKVVEFLQKHDLDLICRAHQVVEDGYEFFAKRQLVTVFSAPNYCGEFDNAGAMMSVDDTLTCSFQILKASEK-KGKVGFGNNML---RPGTPP 449
            C HGGLSPDL++++QIR I RP DVPDQGLLCDLLW+DPDKD++GWGENDRGVS+TFGA+ V +FL KHDLDLICRAHQVVEDGYEFFAKRQLVT+FSAPNYCGEFDNAGAMMSVD+TL CSFQILK ++K KGK G  + +    RP TPP
Sbjct:  171 CCHGGLSPDLQSMEQIRRIMRPTDVPDQGLLCDLLWSDPDKDVQGWGENDRGVSFTFGAEVVAKFLHKHDLDLICRAHQVVEDGYEFFAKRQLVTLFSAPNYCGEFDNAGAMMSVDETLMCSFQILKPADKNKGKYGQFSGLNPGGRPITPP 322
[Close]
BLAST of DY258650 vs. ExPASy Swiss-Prot
Match: PP1A_CANFA (Serine/threonine-protein phosphatase PP1-alpha catalytic subunit OS=Canis familiaris GN=PPP1CA PE=2 SV=1)

HSP 1 Score: 246.514 bits (628), Expect = 1.335e-64
Identity = 117/152 (76.97%), Postives = 133/152 (87.50%), Query Frame = 3 
Query:    6 CMHGGLSPDLKNLDQIRNIARPVDVPDQGLLCDLLWADPDKDIEGWGENDRGVSYTFGADKVVEFLQKHDLDLICRAHQVVEDGYEFFAKRQLVTVFSAPNYCGEFDNAGAMMSVDDTLTCSFQILKASEK-KGKVGFGNNML---RPGTPP 449
            C HGGLSPDL++++QIR I RP DVPDQGLLCDLLW+DPDKD++GWGENDRGVS+TFGA+ V +FL KHDLDLICRAHQVVEDGYEFFAKRQLVT+FSAPNYCGEFDNAGAMMSVD+TL CSFQILK ++K KGK G  + +    RP TPP
Sbjct:  171 CCHGGLSPDLQSMEQIRRIMRPTDVPDQGLLCDLLWSDPDKDVQGWGENDRGVSFTFGAEVVAKFLHKHDLDLICRAHQVVEDGYEFFAKRQLVTLFSAPNYCGEFDNAGAMMSVDETLMCSFQILKPADKNKGKYGQFSGLNPGGRPITPP 322
[Close]
BLAST of DY258650 vs. ExPASy Swiss-Prot
Match: PP1A_BOVIN (Serine/threonine-protein phosphatase PP1-alpha catalytic subunit OS=Bos taurus GN=PPP1CA PE=2 SV=1)

HSP 1 Score: 246.514 bits (628), Expect = 1.335e-64
Identity = 117/152 (76.97%), Postives = 133/152 (87.50%), Query Frame = 3 
Query:    6 CMHGGLSPDLKNLDQIRNIARPVDVPDQGLLCDLLWADPDKDIEGWGENDRGVSYTFGADKVVEFLQKHDLDLICRAHQVVEDGYEFFAKRQLVTVFSAPNYCGEFDNAGAMMSVDDTLTCSFQILKASEK-KGKVGFGNNML---RPGTPP 449
            C HGGLSPDL++++QIR I RP DVPDQGLLCDLLW+DPDKD++GWGENDRGVS+TFGA+ V +FL KHDLDLICRAHQVVEDGYEFFAKRQLVT+FSAPNYCGEFDNAGAMMSVD+TL CSFQILK ++K KGK G  + +    RP TPP
Sbjct:  171 CCHGGLSPDLQSMEQIRRIMRPTDVPDQGLLCDLLWSDPDKDVQGWGENDRGVSFTFGAEVVAKFLHKHDLDLICRAHQVVEDGYEFFAKRQLVTLFSAPNYCGEFDNAGAMMSVDETLMCSFQILKPADKNKGKYGQFSGLNPGGRPITPP 322
[Close]
BLAST of DY258650 vs. ExPASy Swiss-Prot
Match: PPIG_XENTR (Serine/threonine-protein phosphatase PP1-gamma catalytic subunit OS=Xenopus tropicalis GN=ppp1cc PE=2 SV=1)

HSP 1 Score: 246.128 bits (627), Expect = 1.743e-64
Identity = 116/148 (78.38%), Postives = 128/148 (86.49%), Query Frame = 3 
Query:    6 CMHGGLSPDLKNLDQIRNIARPVDVPDQGLLCDLLWADPDKDIEGWGENDRGVSYTFGADKVVEFLQKHDLDLICRAHQVVEDGYEFFAKRQLVTVFSAPNYCGEFDNAGAMMSVDDTLTCSFQILKASEKKGKVGFGNNMLRPGTPP 449
            C HGGLSPDL++++QIR I RP DVPDQGLLCDLLW+DPDKD+ GWGENDRGVS+TFGA+ V +FL KHDLDLICRAHQVVEDGYEFFAKRQLVT+FSAPNYCGEFDNAGAMMSVD+TL CSFQILK +EKK       N  RP TPP
Sbjct:  171 CCHGGLSPDLQSMEQIRRIMRPTDVPDQGLLCDLLWSDPDKDVLGWGENDRGVSFTFGAEVVAKFLHKHDLDLICRAHQVVEDGYEFFAKRQLVTLFSAPNYCGEFDNAGAMMSVDETLMCSFQILKPAEKKKP-----NASRPVTPP 313
[Close]
BLAST of DY258650 vs. ExPASy Swiss-Prot
Match: PP1GB_XENLA (Serine/threonine-protein phosphatase PP1-gamma catalytic subunit B OS=Xenopus laevis GN=ppp1cc-B PE=2 SV=1)

HSP 1 Score: 246.128 bits (627), Expect = 1.743e-64
Identity = 116/148 (78.38%), Postives = 128/148 (86.49%), Query Frame = 3 
Query:    6 CMHGGLSPDLKNLDQIRNIARPVDVPDQGLLCDLLWADPDKDIEGWGENDRGVSYTFGADKVVEFLQKHDLDLICRAHQVVEDGYEFFAKRQLVTVFSAPNYCGEFDNAGAMMSVDDTLTCSFQILKASEKKGKVGFGNNMLRPGTPP 449
            C HGGLSPDL++++QIR I RP DVPDQGLLCDLLW+DPDKD+ GWGENDRGVS+TFGA+ V +FL KHDLDLICRAHQVVEDGYEFFAKRQLVT+FSAPNYCGEFDNAGAMMSVD+TL CSFQILK +EKK       N  RP TPP
Sbjct:  171 CCHGGLSPDLQSMEQIRRIMRPTDVPDQGLLCDLLWSDPDKDVLGWGENDRGVSFTFGAEVVAKFLHKHDLDLICRAHQVVEDGYEFFAKRQLVTLFSAPNYCGEFDNAGAMMSVDETLMCSFQILKPAEKKKP-----NASRPVTPP 313
[Close]
BLAST of DY258650 vs. ExPASy Swiss-Prot
Match: PP1GA_XENLA (Serine/threonine-protein phosphatase PP1-gamma catalytic subunit A OS=Xenopus laevis GN=ppp1cc-A PE=1 SV=2)

HSP 1 Score: 246.128 bits (627), Expect = 1.743e-64
Identity = 116/148 (78.38%), Postives = 128/148 (86.49%), Query Frame = 3 
Query:    6 CMHGGLSPDLKNLDQIRNIARPVDVPDQGLLCDLLWADPDKDIEGWGENDRGVSYTFGADKVVEFLQKHDLDLICRAHQVVEDGYEFFAKRQLVTVFSAPNYCGEFDNAGAMMSVDDTLTCSFQILKASEKKGKVGFGNNMLRPGTPP 449
            C HGGLSPDL++++QIR I RP DVPDQGLLCDLLW+DPDKD+ GWGENDRGVS+TFGA+ V +FL KHDLDLICRAHQVVEDGYEFFAKRQLVT+FSAPNYCGEFDNAGAMMSVD+TL CSFQILK +EKK       N  RP TPP
Sbjct:  171 CCHGGLSPDLQSMEQIRRIMRPTDVPDQGLLCDLLWSDPDKDVLGWGENDRGVSFTFGAEVVAKFLHKHDLDLICRAHQVVEDGYEFFAKRQLVTLFSAPNYCGEFDNAGAMMSVDETLMCSFQILKPAEKKKP-----NASRPVTPP 313
The following BLAST results are available for this feature:
BLAST of DY258650 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 189
Match NameE-valueIdentityDescription
PP1G_BOVIN1.335e-6478.38Serine/threonine-protein phosphatase PP1-gamma cat... [more]
PP1A_RAT1.335e-6476.97Serine/threonine-protein phosphatase PP1-alpha cat... [more]
PP1A_RABIT1.335e-6476.97Serine/threonine-protein phosphatase PP1-alpha cat... [more]
PP1A_MOUSE1.335e-6476.97Serine/threonine-protein phosphatase PP1-alpha cat... [more]
PP1A_HUMAN1.335e-6476.97Serine/threonine-protein phosphatase PP1-alpha cat... [more]
PP1A_CANFA1.335e-6476.97Serine/threonine-protein phosphatase PP1-alpha cat... [more]
PP1A_BOVIN1.335e-6476.97Serine/threonine-protein phosphatase PP1-alpha cat... [more]
PPIG_XENTR1.743e-6478.38Serine/threonine-protein phosphatase PP1-gamma cat... [more]
PP1GB_XENLA1.743e-6478.38Serine/threonine-protein phosphatase PP1-gamma cat... [more]
PP1GA_XENLA1.743e-6478.38Serine/threonine-protein phosphatase PP1-gamma cat... [more]

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Properties
Property NameValue
Genbank descriptionKN0AAI2DC08FM1 AbsDev1 Citrus clementina cDNA 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DY258650 ID=DY258650; Name=DY258650; organism=Citrus clementina; type=EST; length=826bp
TTCTATGTATGCATGGTGGGTTATCTCCTGATTTGAAAAATTTGGATCAG
ATCAGGAATATTGCTCGCCCTGTTGATGTGCCAGATCAGGGCCTTCTTTG
TGATTTGTTGTGGGCTGATCCTGACAAAGATATTGAGGGCTGGGGAGAGA
ATGACAGGGGTGTGTCCTACACCTTTGGGGCTGACAAGGTTGTTGAATTC
CTTCAGAAGCATGACCTTGATCTTATCTGTCGAGCTCATCAGGTTGTGGA
AGATGGTTATGAATTTTTTGCAAAGCGTCAGCTTGTGACTGTATTCTCTG
CACCAAATTACTGTGGCGAATTTGATAATGCCGGTGCCATGATGAGTGTG
GATGATACATTGACATGCTCCTTTCAGATCCTTAAGGCGTCTGAGAAGAA
AGGAAAAGTTGGATTTGGCAATAACATGTTGAGACCCGGAACTCCTCCCC
ATAAGGGTGGGAAGGGGTGATTGGATTGATTTGACTGATACCAATGATCT
GAAGGATGAAGGGCATAGTTCATATCCTGGCTTTCTGTACTTGTTTGGTT
GGCGTGACTAGTCGCAGAGTCAGTCAAGCCTTTTTGGGCACTTAAGAAGG
GATGTCAAGACATGAGAGTTTCTGCAACGGTGTGTGACGATAGCTGAGTT
ATTAATTGCAGTAAAACCTGTGGTCTTTGTTTTTTCATCATGTAAAATGG
GAATTCTAACTTCATAATGCTGAATTGCACCATTGGTGTAGATGCACTAT
TTTTGTTTTCTCTGTTTTCATTTTCATTTTGTTGTAGTTTGTTAATTATC
CTGCTAATCCAATGCAAATTGATTTT
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