DY258650

Overview
NameDY258650
Unique NameDY258650
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length826
Libraries
Library NameType
AbsDev1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of DY258650 vs. ExPASy Swiss-Prot
Match: PP4C_XENTR (Serine/threonine-protein phosphatase 4 catalytic subunit OS=Xenopus tropicalis GN=ppp4c PE=2 SV=1)

HSP 1 Score: 134.42 bits (337), Expect = 7.392e-31
Identity = 61/132 (46.21%), Postives = 90/132 (68.18%), Query Frame = 3
Query:    6 CMHGGLSPDLKNLDQIRNIARPVDVPDQGLLCDLLWADPDKDIEGWGENDRGVSYTFGADKVVEFLQKHDLDLICRAHQVVEDGYEFFAKRQLVTVFSAPNYCGEFDNAGAMMSVDDTLTCSFQILKASEKK 401
            C+HGGLSP ++ LDQIR I R  +VP  G +CDLLW+DP+ D  GWG + RG  Y FG+D V +F   +++D+ICRAHQ+V +GY++     ++TV+SAPNYC    N  A++ +D+ L   F I +A+ ++
Sbjct:  162 CVHGGLSPSIQTLDQIRTIDRKQEVPHDGPMCDLLWSDPE-DTTGWGVSPRGAGYLFGSDVVAQFNAANNIDMICRAHQLVMEGYKWHFNETVLTVWSAPNYCYRCGNVAAILELDEHLQKEFIIFEAAPQE 292          
BLAST of DY258650 vs. ExPASy Swiss-Prot
Match: PP4C_XENLA (Serine/threonine-protein phosphatase 4 catalytic subunit OS=Xenopus laevis GN=ppp4c PE=2 SV=1)

HSP 1 Score: 134.42 bits (337), Expect = 7.392e-31
Identity = 61/132 (46.21%), Postives = 90/132 (68.18%), Query Frame = 3
Query:    6 CMHGGLSPDLKNLDQIRNIARPVDVPDQGLLCDLLWADPDKDIEGWGENDRGVSYTFGADKVVEFLQKHDLDLICRAHQVVEDGYEFFAKRQLVTVFSAPNYCGEFDNAGAMMSVDDTLTCSFQILKASEKK 401
            C+HGGLSP ++ LDQIR I R  +VP  G +CDLLW+DP+ D  GWG + RG  Y FG+D V +F   +++D+ICRAHQ+V +GY++     ++TV+SAPNYC    N  A++ +D+ L   F I +A+ ++
Sbjct:  162 CVHGGLSPSIQTLDQIRTIDRKQEVPHDGPMCDLLWSDPE-DTTGWGVSPRGAGYLFGSDVVAQFNAANNIDMICRAHQLVMEGYKWHFNETVLTVWSAPNYCYRCGNVAAILELDEHLQKEFIIFEAAPQE 292          
BLAST of DY258650 vs. ExPASy Swiss-Prot
Match: PP4C_RAT (Serine/threonine-protein phosphatase 4 catalytic subunit OS=Rattus norvegicus GN=Ppp4c PE=1 SV=1)

HSP 1 Score: 134.42 bits (337), Expect = 7.392e-31
Identity = 61/132 (46.21%), Postives = 89/132 (67.42%), Query Frame = 3
Query:    6 CMHGGLSPDLKNLDQIRNIARPVDVPDQGLLCDLLWADPDKDIEGWGENDRGVSYTFGADKVVEFLQKHDLDLICRAHQVVEDGYEFFAKRQLVTVFSAPNYCGEFDNAGAMMSVDDTLTCSFQILKASEKK 401
            C+HGGLSP ++ LDQIR I R  +VP  G +CDLLW+DP+ D  GWG + RG  Y FG+D V +F   +D+D+ CRAHQ+V +GY++     ++TV+SAPNYC    N  A++ +D+ L   F I +A+ ++
Sbjct:  162 CVHGGLSPSIQTLDQIRTIDRKQEVPHDGPMCDLLWSDPE-DTTGWGVSPRGAGYLFGSDVVAQFNAANDIDMTCRAHQLVMEGYKWHFNETVLTVWSAPNYCYRCGNVAAILELDEHLQKDFIIFEAAPQE 292          
BLAST of DY258650 vs. ExPASy Swiss-Prot
Match: PP4C_YEAST (Serine/threonine-protein phosphatase 4 catalytic subunit OS=Saccharomyces cerevisiae GN=PPH3 PE=1 SV=2)

HSP 1 Score: 134.035 bits (336), Expect = 9.655e-31
Identity = 61/136 (44.85%), Postives = 93/136 (68.38%), Query Frame = 3
Query:    6 CMHGGLSPDLKNLDQIRNIARPVDVPDQGLLCDLLWADPDKDIEGWGENDRGVSYTFGADKVVEFLQKHDLDLICRAHQVVEDGYEFFAKRQLVTVFSAPNYCGEFDNAGAMMSVDDTLTCSFQILKASEKKGKVG 413
            C+HGGLSPD+  +D+IR I R  +VP +G +CDLLW+DP+ D++ W  + RG  + FG  +V +FL+K++++LI RAHQ+V +GY+      LVTV+SAPNYC    N  A++ +DD L   + I +A + + +VG
Sbjct:  159 CVHGGLSPDMTTVDEIRTIDRKQEVPHEGAMCDLLWSDPE-DVDTWSLSPRGAGFLFGKREVDQFLEKNNVELIARAHQLVMEGYKEMFDGGLVTVWSAPNYCYRCGNVAAVLKIDDDLNREYTIFEAVQAQNEVG 293          
BLAST of DY258650 vs. ExPASy Swiss-Prot
Match: PPX2_PARTE (Serine/threonine-protein phosphatase PP-X homolog 2 OS=Paramecium tetraurelia GN=Ppx2 PE=3 SV=1)

HSP 1 Score: 133.65 bits (335), Expect = 1.261e-30
Identity = 58/129 (44.96%), Postives = 91/129 (70.54%), Query Frame = 3
Query:    6 CMHGGLSPDLKNLDQIRNIARPVDVPDQGLLCDLLWADPDKDIEGWGENDRGVSYTFGADKVVEFLQKHDLDLICRAHQVVEDGYEFFAKRQLVTVFSAPNYCGEFDNAGAMMSVDDTLTCSFQILKAS 392
            C+HGGLSP +K +D+IR I R  +VP +G++CDL+W+DPD +IEGW ++ RG  + FGAD V EF +++ + LICRAHQ+  +G++      LVTV+SAPNYC    N  +++ +D+ L   +++ +A+
Sbjct:  159 CVHGGLSPYIKTIDEIRIINRKQEVPHEGVMCDLMWSDPD-EIEGWSQSARGAGFVFGADVVKEFNRRNGISLICRAHQLAMEGFKLMFDNSLVTVWSAPNYCYRCGNVASILELDENLKKYYKLFEAA 286          
BLAST of DY258650 vs. ExPASy Swiss-Prot
Match: PPX1_PARTE (Serine/threonine-protein phosphatase PP-X homolog 1 OS=Paramecium tetraurelia GN=Ppx1 PE=3 SV=2)

HSP 1 Score: 133.65 bits (335), Expect = 1.261e-30
Identity = 58/129 (44.96%), Postives = 91/129 (70.54%), Query Frame = 3
Query:    6 CMHGGLSPDLKNLDQIRNIARPVDVPDQGLLCDLLWADPDKDIEGWGENDRGVSYTFGADKVVEFLQKHDLDLICRAHQVVEDGYEFFAKRQLVTVFSAPNYCGEFDNAGAMMSVDDTLTCSFQILKAS 392
            C+HGGLSP +K +D+IR I R  +VP +G++CDL+W+DPD +IEGW ++ RG  + FGAD V EF +++ + LICRAHQ+  +G++      LVTV+SAPNYC    N  +++ +D+ L   +++ +A+
Sbjct:  159 CVHGGLSPYIKTIDEIRIINRKQEVPHEGVMCDLMWSDPD-EIEGWSQSARGAGFVFGADVVKEFNRRNGISLICRAHQLAMEGFKLMFDNSLVTVWSAPNYCYRCGNVASILELDENLKKYYKLFEAA 286          
BLAST of DY258650 vs. ExPASy Swiss-Prot
Match: PP4CA_DANRE (Serine/threonine-protein phosphatase 4 catalytic subunit A OS=Danio rerio GN=ppp4ca PE=2 SV=1)

HSP 1 Score: 133.265 bits (334), Expect = 1.647e-30
Identity = 61/132 (46.21%), Postives = 89/132 (67.42%), Query Frame = 3
Query:    6 CMHGGLSPDLKNLDQIRNIARPVDVPDQGLLCDLLWADPDKDIEGWGENDRGVSYTFGADKVVEFLQKHDLDLICRAHQVVEDGYEFFAKRQLVTVFSAPNYCGEFDNAGAMMSVDDTLTCSFQILKASEKK 401
            C+HGGLSP ++ LDQIR I R  +VP  G +CDLLW+DP+ D  GWG + RG  Y FG+D V +F   +D+ +ICRAHQ+V +GY++     ++TV+SAPNYC    N  A++ +D+ L   F I +A+ ++
Sbjct:  166 CVHGGLSPSIQTLDQIRTIDRKQEVPHDGPMCDLLWSDPE-DTTGWGVSPRGAGYLFGSDVVAQFNAANDISMICRAHQLVMEGYKWHFNDTVLTVWSAPNYCYRCGNVAAILELDEHLQKEFIIFEAAPQE 296          
BLAST of DY258650 vs. ExPASy Swiss-Prot
Match: PPX1_ARATH (Serine/threonine-protein phosphatase PP-X isozyme 1 OS=Arabidopsis thaliana GN=PPX1 PE=2 SV=1)

HSP 1 Score: 132.88 bits (333), Expect = 2.151e-30
Identity = 57/134 (42.54%), Postives = 87/134 (64.93%), Query Frame = 3
Query:    6 CMHGGLSPDLKNLDQIRNIARPVDVPDQGLLCDLLWADPDKDIEGWGENDRGVSYTFGADKVVEFLQKHDLDLICRAHQVVEDGYEFFAKRQLVTVFSAPNYCGEFDNAGAMMSVDDTLTCSFQILKASEKKGK 407
            C+HGGLSP +  LDQIR I R  +VP  G +CDLLW+DP+  ++GWG + RG  + FG   V  F   +++D I RAHQ+V +GY++    Q+VTV+SAPNYC    N  +++ +D+ L   F++  A+++  +
Sbjct:  159 CVHGGLSPAIMTLDQIRTIDRKQEVPHDGAMCDLLWSDPEDIVDGWGLSPRGAGFLFGGSVVTSFNHSNNIDYIARAHQLVMEGYKWMFDSQIVTVWSAPNYCYRCGNVASILELDENLNKEFRVFDAAQQDSR 292          
BLAST of DY258650 vs. ExPASy Swiss-Prot
Match: PPP6_DICDI (Serine/threonine-protein phosphatase 6 catalytic subunit OS=Dictyostelium discoideum GN=ppp6c PE=2 SV=2)

HSP 1 Score: 132.88 bits (333), Expect = 2.151e-30
Identity = 60/136 (44.12%), Postives = 93/136 (68.38%), Query Frame = 3
Query:    3 LCMHGGLSPDLKNLDQIRNIARPVDVPDQGLLCDLLWADPDKDIEGWGENDRGVSYTFGADKVVEFLQKHDLDLICRAHQVVEDGYEFFAKRQLVTVFSAPNYCGEFDNAGAMMSVDDTLTCSFQILKASEKKGKV 410
            LC+HGGLSP ++ LDQIR I+R +++P +G  CDL+W+DP+ DIE W  + RG  + FG+    EF   + L+LICRAHQ+V++GY +     LVTV+SAPNYC    N  +++S+++ L   F+I +A +++  +
Sbjct:  161 LCVHGGLSPKVRTLDQIRIISRNLEIPHEGPFCDLMWSDPE-DIEQWQPSPRGAGWLFGSKVTAEFEHINGLNLICRAHQLVQEGYRYMFDNSLVTVWSAPNYCYRCGNVASILSLNENLDRDFKIFQAVQEERNI 295          
BLAST of DY258650 vs. ExPASy Swiss-Prot
Match: PP4C_DICDI (Serine/threonine-protein phosphatase 4 catalytic subunit OS=Dictyostelium discoideum GN=ppp4c PE=1 SV=1)

HSP 1 Score: 132.88 bits (333), Expect = 2.151e-30
Identity = 60/134 (44.78%), Postives = 90/134 (67.16%), Query Frame = 3
Query:    6 CMHGGLSPDLKNLDQIRNIARPVDVPDQGLLCDLLWADPDKDIEGWGENDRGVSYTFGADKVVEFLQKHDLDLICRAHQVVEDGYEFFAKRQLVTVFSAPNYCGEFDNAGAMMSVDDTLTCSFQILKASEKKGK 407
            C+HGGLSP +  LDQIR I R  +VP +G +CDL+W+DP+ DI GW  + RG  + FG D V +F   ++L+ ICRAHQ+V +G+++     LVTV+SAPNYC    N  A++ +D+ L  +F I +A+ ++ +
Sbjct:  160 CVHGGLSPSINTLDQIRAIDRKQEVPHEGPMCDLMWSDPE-DIPGWNGSPRGAGFLFGEDVVQKFNHDNNLEFICRAHQLVMEGFKYMFNETLVTVWSAPNYCYRCGNVAAILQLDENLKKNFAIFEAAPQESR 292          
The following BLAST results are available for this feature:
BLAST of DY258650 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 189
Match NameE-valueIdentityDescription
PP4C_XENTR7.392e-3146.21Serine/threonine-protein phosphatase 4 catalytic s... [more]
PP4C_XENLA7.392e-3146.21Serine/threonine-protein phosphatase 4 catalytic s... [more]
PP4C_RAT7.392e-3146.21Serine/threonine-protein phosphatase 4 catalytic s... [more]
PP4C_YEAST9.655e-3144.85Serine/threonine-protein phosphatase 4 catalytic s... [more]
PPX2_PARTE1.261e-3044.96Serine/threonine-protein phosphatase PP-X homolog ... [more]
PPX1_PARTE1.261e-3044.96Serine/threonine-protein phosphatase PP-X homolog ... [more]
PP4CA_DANRE1.647e-3046.21Serine/threonine-protein phosphatase 4 catalytic s... [more]
PPX1_ARATH2.151e-3042.54Serine/threonine-protein phosphatase PP-X isozyme ... [more]
PPP6_DICDI2.151e-3044.12Serine/threonine-protein phosphatase 6 catalytic s... [more]
PP4C_DICDI2.151e-3044.78Serine/threonine-protein phosphatase 4 catalytic s... [more]

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Properties
Property NameValue
Genbank descriptionKN0AAI2DC08FM1 AbsDev1 Citrus clementina cDNA 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DY258650 ID=DY258650; Name=DY258650; organism=Citrus clementina; type=EST; length=826bp
TTCTATGTATGCATGGTGGGTTATCTCCTGATTTGAAAAATTTGGATCAG
ATCAGGAATATTGCTCGCCCTGTTGATGTGCCAGATCAGGGCCTTCTTTG
TGATTTGTTGTGGGCTGATCCTGACAAAGATATTGAGGGCTGGGGAGAGA
ATGACAGGGGTGTGTCCTACACCTTTGGGGCTGACAAGGTTGTTGAATTC
CTTCAGAAGCATGACCTTGATCTTATCTGTCGAGCTCATCAGGTTGTGGA
AGATGGTTATGAATTTTTTGCAAAGCGTCAGCTTGTGACTGTATTCTCTG
CACCAAATTACTGTGGCGAATTTGATAATGCCGGTGCCATGATGAGTGTG
GATGATACATTGACATGCTCCTTTCAGATCCTTAAGGCGTCTGAGAAGAA
AGGAAAAGTTGGATTTGGCAATAACATGTTGAGACCCGGAACTCCTCCCC
ATAAGGGTGGGAAGGGGTGATTGGATTGATTTGACTGATACCAATGATCT
GAAGGATGAAGGGCATAGTTCATATCCTGGCTTTCTGTACTTGTTTGGTT
GGCGTGACTAGTCGCAGAGTCAGTCAAGCCTTTTTGGGCACTTAAGAAGG
GATGTCAAGACATGAGAGTTTCTGCAACGGTGTGTGACGATAGCTGAGTT
ATTAATTGCAGTAAAACCTGTGGTCTTTGTTTTTTCATCATGTAAAATGG
GAATTCTAACTTCATAATGCTGAATTGCACCATTGGTGTAGATGCACTAT
TTTTGTTTTCTCTGTTTTCATTTTCATTTTGTTGTAGTTTGTTAATTATC
CTGCTAATCCAATGCAAATTGATTTT
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