DY258650

Overview
NameDY258650
Unique NameDY258650
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length826
Libraries
Library NameType
AbsDev1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of DY258650 vs. ExPASy Swiss-Prot
Match: PPH6_CAEEL (Putative serine/threonine-protein phosphatase pph-6 OS=Caenorhabditis elegans GN=pph-6 PE=2 SV=2)

HSP 1 Score: 132.494 bits (332), Expect = 2.809e-30
Identity = 54/117 (46.15%), Postives = 82/117 (70.09%), Query Frame = 3
Query:    3 LCMHGGLSPDLKNLDQIRNIARPVDVPDQGLLCDLLWADPDKDIEGWGENDRGVSYTFGADKVVEFLQKHDLDLICRAHQVVEDGYEFFAKRQLVTVFSAPNYCGEFDNAGAMMSVD 353
            LC+HGGLSPD++ +D +  + R  +VP++G LCD++W+DPD D+E W  + RG  + FGA    EFL  +DL L+CR+HQ+V++G+++    +L TV+SAPNYC    NA A+  +D
Sbjct:  186 LCVHGGLSPDIRTIDSLMLLDRAQEVPNKGPLCDIMWSDPDDDVEDWVISQRGAGFVFGAKVTEEFLMNNDLSLLCRSHQLVDEGFKYMFNEKLATVWSAPNYCYRCGNAAAVFEID 302          
BLAST of DY258650 vs. ExPASy Swiss-Prot
Match: PP4C_DROME (Serine/threonine-protein phosphatase 4 catalytic subunit OS=Drosophila melanogaster GN=Pp4-19C PE=2 SV=1)

HSP 1 Score: 132.494 bits (332), Expect = 2.809e-30
Identity = 60/134 (44.78%), Postives = 93/134 (69.40%), Query Frame = 3
Query:    6 CMHGGLSPDLKNLDQIRNIARPVDVPDQGLLCDLLWADPDKDIEGWGENDRGVSYTFGADKVVEFLQKHDLDLICRAHQVVEDGYEFFAKRQLVTVFSAPNYCGEFDNAGAMMSVDDTLTCSFQILKASEKKGK 407
            C+HGGLSP ++ LDQIR+I R  +VP  G +CDLLW+DP+ D  GWG + RG  Y FG+D V +F + +D+D+ICRAHQ+V +G+++     ++TV+SAPNYC    N  A++ +++ L   F I +A+ ++ +
Sbjct:  162 CVHGGLSPSIQYLDQIRSIDRKQEVPHDGPMCDLLWSDPE-DQTGWGVSPRGAGYLFGSDVVSQFNRTNDIDMICRAHQLVMEGFKWHFNETVLTVWSAPNYCYRCGNVAAILELNEYLHRDFVIFEAAPQESR 294          
BLAST of DY258650 vs. ExPASy Swiss-Prot
Match: PP4C_ASHGO (Serine/threonine-protein phosphatase 4 catalytic subunit OS=Ashbya gossypii GN=PPH3 PE=3 SV=2)

HSP 1 Score: 130.954 bits (328), Expect = 8.173e-30
Identity = 59/128 (46.09%), Postives = 90/128 (70.31%), Query Frame = 3
Query:    6 CMHGGLSPDLKNLDQIRNIARPVDVPDQGLLCDLLWADPDKDIEGWGENDRGVSYTFGADKVVEFLQKHDLDLICRAHQVVEDGYEFFAKRQLVTVFSAPNYCGEFDNAGAMMSVDDTLTCSFQILKA 389
            C+HGGLSPD+  +D+IR+I R  +VP +G +CDLLW+DPD +++ W  + RG  + FG ++V +FL ++D+ LI RAHQ+V +GY+      LVTV+SAPNYC    N  A++ +DD L+ ++ I +A
Sbjct:  161 CVHGGLSPDVMTVDEIRSIDRKQEVPHEGAMCDLLWSDPD-EVDTWSLSPRGAGFLFGKNEVDQFLHRNDISLIARAHQLVMEGYKEMFDGGLVTVWSAPNYCYRCGNVAAVLRIDDDLSRNYTIFEA 287          
BLAST of DY258650 vs. ExPASy Swiss-Prot
Match: PP2A_ACECL (Serine/threonine-protein phosphatase PP2A-1 catalytic subunit OS=Acetabularia cliftonii PE=2 SV=1)

HSP 1 Score: 130.954 bits (328), Expect = 8.173e-30
Identity = 62/136 (45.59%), Postives = 89/136 (65.44%), Query Frame = 3
Query:    6 CMHGGLSPDLKNLDQIRNIARPVDVPDQGLLCDLLWADPDKDIEGWGENDRGVSYTFGADKVVEFLQKHDLDLICRAHQVVEDGYEFFAKRQLVTVFSAPNYCGEFDNAGAMMSVDDTLTCSFQILKASEKKGKVG 413
            C+HGGLSP L  LDQIR + R  +VP +G +CDLLW+DPD+ + GWG + RG  YTFG D   +F  ++ L L+ RAHQ+V +GY +  ++ +VT+FSAPNYC    N  A+M V + +   FQ  + + ++G  G
Sbjct:  162 CLHGGLSPALDTLDQIRELDRIQEVPHEGPMCDLLWSDPDERL-GWGISPRGAGYTFGQDISEQFNVRNSLKLVARAHQLVMEGYNWSHEKNVVTIFSAPNYCYRCGNMAAIMEVAEGMDKGFQQFEPAPRRGAEG 296          
BLAST of DY258650 vs. ExPASy Swiss-Prot
Match: PP2AB_RAT (Serine/threonine-protein phosphatase 2A catalytic subunit beta isoform OS=Rattus norvegicus GN=Ppp2cb PE=2 SV=1)

HSP 1 Score: 130.954 bits (328), Expect = 8.173e-30
Identity = 64/134 (47.76%), Postives = 85/134 (63.43%), Query Frame = 3
Query:    6 CMHGGLSPDLKNLDQIRNIARPVDVPDQGLLCDLLWADPDKDIEGWGENDRGVSYTFGADKVVEFLQKHDLDLICRAHQVVEDGYEFFAKRQLVTVFSAPNYCGEFDNAGAMMSVDDTLTCSFQILKASEKKGK 407
            C+HGGLSP +  LD IR + R  +VP +G +CDLLW+DPD D  GWG + RG  YTFG D    F   + L L+ RAHQ+V +GY +   R +VT+FSAPNYC    N  A+M +DDTL  SF     + ++G+
Sbjct:  165 CLHGGLSPSIDTLDHIRALDRLQEVPHEGPMCDLLWSDPD-DRGGWGISPRGAGYTFGQDISETFNHANGLTLVSRAHQLVMEGYNWCHDRNVVTIFSAPNYCYRCGNQAAIMELDDTLKYSFLQFDPAPRRGE 297          
BLAST of DY258650 vs. ExPASy Swiss-Prot
Match: PP2AB_RABIT (Serine/threonine-protein phosphatase 2A catalytic subunit beta isoform OS=Oryctolagus cuniculus GN=PPP2CB PE=1 SV=1)

HSP 1 Score: 130.954 bits (328), Expect = 8.173e-30
Identity = 64/134 (47.76%), Postives = 85/134 (63.43%), Query Frame = 3
Query:    6 CMHGGLSPDLKNLDQIRNIARPVDVPDQGLLCDLLWADPDKDIEGWGENDRGVSYTFGADKVVEFLQKHDLDLICRAHQVVEDGYEFFAKRQLVTVFSAPNYCGEFDNAGAMMSVDDTLTCSFQILKASEKKGK 407
            C+HGGLSP +  LD IR + R  +VP +G +CDLLW+DPD D  GWG + RG  YTFG D    F   + L L+ RAHQ+V +GY +   R +VT+FSAPNYC    N  A+M +DDTL  SF     + ++G+
Sbjct:  165 CLHGGLSPSIDTLDHIRALDRLQEVPHEGPMCDLLWSDPD-DRGGWGISPRGAGYTFGQDISETFNHANGLTLVSRAHQLVMEGYNWCHDRNVVTIFSAPNYCYRCGNQAAIMELDDTLKYSFLQFDPAPRRGE 297          
BLAST of DY258650 vs. ExPASy Swiss-Prot
Match: PP2AB_PIG (Serine/threonine-protein phosphatase 2A catalytic subunit beta isoform (Fragment) OS=Sus scrofa GN=PPP2CB PE=2 SV=2)

HSP 1 Score: 130.954 bits (328), Expect = 8.173e-30
Identity = 64/134 (47.76%), Postives = 85/134 (63.43%), Query Frame = 3
Query:    6 CMHGGLSPDLKNLDQIRNIARPVDVPDQGLLCDLLWADPDKDIEGWGENDRGVSYTFGADKVVEFLQKHDLDLICRAHQVVEDGYEFFAKRQLVTVFSAPNYCGEFDNAGAMMSVDDTLTCSFQILKASEKKGK 407
            C+HGGLSP +  LD IR + R  +VP +G +CDLLW+DPD D  GWG + RG  YTFG D    F   + L L+ RAHQ+V +GY +   R +VT+FSAPNYC    N  A+M +DDTL  SF     + ++G+
Sbjct:  149 CLHGGLSPSIDTLDHIRALDRLQEVPHEGPMCDLLWSDPD-DRGGWGISPRGAGYTFGQDISETFNHANGLTLVSRAHQLVMEGYNWCHDRNVVTIFSAPNYCYRCGNQAAIMELDDTLKYSFLQFDPAPRRGE 281          
BLAST of DY258650 vs. ExPASy Swiss-Prot
Match: PP2AB_MOUSE (Serine/threonine-protein phosphatase 2A catalytic subunit beta isoform OS=Mus musculus GN=Ppp2cb PE=1 SV=1)

HSP 1 Score: 130.954 bits (328), Expect = 8.173e-30
Identity = 64/134 (47.76%), Postives = 85/134 (63.43%), Query Frame = 3
Query:    6 CMHGGLSPDLKNLDQIRNIARPVDVPDQGLLCDLLWADPDKDIEGWGENDRGVSYTFGADKVVEFLQKHDLDLICRAHQVVEDGYEFFAKRQLVTVFSAPNYCGEFDNAGAMMSVDDTLTCSFQILKASEKKGK 407
            C+HGGLSP +  LD IR + R  +VP +G +CDLLW+DPD D  GWG + RG  YTFG D    F   + L L+ RAHQ+V +GY +   R +VT+FSAPNYC    N  A+M +DDTL  SF     + ++G+
Sbjct:  165 CLHGGLSPSIDTLDHIRALDRLQEVPHEGPMCDLLWSDPD-DRGGWGISPRGAGYTFGQDISETFNHANGLTLVSRAHQLVMEGYNWCHDRNVVTIFSAPNYCYRCGNQAAIMELDDTLKYSFLQFDPAPRRGE 297          
BLAST of DY258650 vs. ExPASy Swiss-Prot
Match: PP2AB_HUMAN (Serine/threonine-protein phosphatase 2A catalytic subunit beta isoform OS=Homo sapiens GN=PPP2CB PE=1 SV=1)

HSP 1 Score: 130.954 bits (328), Expect = 8.173e-30
Identity = 64/134 (47.76%), Postives = 85/134 (63.43%), Query Frame = 3
Query:    6 CMHGGLSPDLKNLDQIRNIARPVDVPDQGLLCDLLWADPDKDIEGWGENDRGVSYTFGADKVVEFLQKHDLDLICRAHQVVEDGYEFFAKRQLVTVFSAPNYCGEFDNAGAMMSVDDTLTCSFQILKASEKKGK 407
            C+HGGLSP +  LD IR + R  +VP +G +CDLLW+DPD D  GWG + RG  YTFG D    F   + L L+ RAHQ+V +GY +   R +VT+FSAPNYC    N  A+M +DDTL  SF     + ++G+
Sbjct:  165 CLHGGLSPSIDTLDHIRALDRLQEVPHEGPMCDLLWSDPD-DRGGWGISPRGAGYTFGQDISETFNHANGLTLVSRAHQLVMEGYNWCHDRNVVTIFSAPNYCYRCGNQAAIMELDDTLKYSFLQFDPAPRRGE 297          
BLAST of DY258650 vs. ExPASy Swiss-Prot
Match: PP2AB_BOVIN (Serine/threonine-protein phosphatase 2A catalytic subunit beta isoform OS=Bos taurus GN=PPP2CB PE=2 SV=1)

HSP 1 Score: 130.954 bits (328), Expect = 8.173e-30
Identity = 64/134 (47.76%), Postives = 85/134 (63.43%), Query Frame = 3
Query:    6 CMHGGLSPDLKNLDQIRNIARPVDVPDQGLLCDLLWADPDKDIEGWGENDRGVSYTFGADKVVEFLQKHDLDLICRAHQVVEDGYEFFAKRQLVTVFSAPNYCGEFDNAGAMMSVDDTLTCSFQILKASEKKGK 407
            C+HGGLSP +  LD IR + R  +VP +G +CDLLW+DPD D  GWG + RG  YTFG D    F   + L L+ RAHQ+V +GY +   R +VT+FSAPNYC    N  A+M +DDTL  SF     + ++G+
Sbjct:  165 CLHGGLSPSIDTLDHIRALDRLQEVPHEGPMCDLLWSDPD-DRGGWGISPRGAGYTFGQDISETFNHANGLTLVSRAHQLVMEGYNWCHDRNVVTIFSAPNYCYRCGNQAAIMELDDTLKYSFLQFDPAPRRGE 297          
The following BLAST results are available for this feature:
BLAST of DY258650 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 189
Match NameE-valueIdentityDescription
PPH6_CAEEL2.809e-3046.15Putative serine/threonine-protein phosphatase pph-... [more]
PP4C_DROME2.809e-3044.78Serine/threonine-protein phosphatase 4 catalytic s... [more]
PP4C_ASHGO8.173e-3046.09Serine/threonine-protein phosphatase 4 catalytic s... [more]
PP2A_ACECL8.173e-3045.59Serine/threonine-protein phosphatase PP2A-1 cataly... [more]
PP2AB_RAT8.173e-3047.76Serine/threonine-protein phosphatase 2A catalytic ... [more]
PP2AB_RABIT8.173e-3047.76Serine/threonine-protein phosphatase 2A catalytic ... [more]
PP2AB_PIG8.173e-3047.76Serine/threonine-protein phosphatase 2A catalytic ... [more]
PP2AB_MOUSE8.173e-3047.76Serine/threonine-protein phosphatase 2A catalytic ... [more]
PP2AB_HUMAN8.173e-3047.76Serine/threonine-protein phosphatase 2A catalytic ... [more]
PP2AB_BOVIN8.173e-3047.76Serine/threonine-protein phosphatase 2A catalytic ... [more]

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Properties
Property NameValue
Genbank descriptionKN0AAI2DC08FM1 AbsDev1 Citrus clementina cDNA 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DY258650 ID=DY258650; Name=DY258650; organism=Citrus clementina; type=EST; length=826bp
TTCTATGTATGCATGGTGGGTTATCTCCTGATTTGAAAAATTTGGATCAG
ATCAGGAATATTGCTCGCCCTGTTGATGTGCCAGATCAGGGCCTTCTTTG
TGATTTGTTGTGGGCTGATCCTGACAAAGATATTGAGGGCTGGGGAGAGA
ATGACAGGGGTGTGTCCTACACCTTTGGGGCTGACAAGGTTGTTGAATTC
CTTCAGAAGCATGACCTTGATCTTATCTGTCGAGCTCATCAGGTTGTGGA
AGATGGTTATGAATTTTTTGCAAAGCGTCAGCTTGTGACTGTATTCTCTG
CACCAAATTACTGTGGCGAATTTGATAATGCCGGTGCCATGATGAGTGTG
GATGATACATTGACATGCTCCTTTCAGATCCTTAAGGCGTCTGAGAAGAA
AGGAAAAGTTGGATTTGGCAATAACATGTTGAGACCCGGAACTCCTCCCC
ATAAGGGTGGGAAGGGGTGATTGGATTGATTTGACTGATACCAATGATCT
GAAGGATGAAGGGCATAGTTCATATCCTGGCTTTCTGTACTTGTTTGGTT
GGCGTGACTAGTCGCAGAGTCAGTCAAGCCTTTTTGGGCACTTAAGAAGG
GATGTCAAGACATGAGAGTTTCTGCAACGGTGTGTGACGATAGCTGAGTT
ATTAATTGCAGTAAAACCTGTGGTCTTTGTTTTTTCATCATGTAAAATGG
GAATTCTAACTTCATAATGCTGAATTGCACCATTGGTGTAGATGCACTAT
TTTTGTTTTCTCTGTTTTCATTTTCATTTTGTTGTAGTTTGTTAATTATC
CTGCTAATCCAATGCAAATTGATTTT
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