DY258653

Overview
NameDY258653
Unique NameDY258653
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length1218
Libraries
Library NameType
AbsDev1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of DY258653 vs. ExPASy Swiss-Prot
Match: AATC_MACFA (Aspartate aminotransferase, cytoplasmic OS=Macaca fascicularis GN=GOT1 PE=2 SV=1)

HSP 1 Score: 124.405 bits (311), Expect = 1.353e-27
Identity = 61/151 (40.40%), Postives = 93/151 (61.59%), Query Frame = 2
Query:  479 EYLPMGGSVKMVEETLKLAYGDNSEFIKDKRIAAVQSLSGTGACRLFADFQKRFH-----PDSQIYIPVPTWSNHHNIWRDAHVTX-RTFHYYHPGTKGLDFAALMDDIKNAPNGSFFLLHACAHNPTGVDPSKDQWKEISYQIKEKGTSP 913
            EYLP+ G  +      +LA GD+S  +K+KR+  VQSL GTGA R+ ADF  R++      ++ +Y+  PTW NH+ ++  A     R++ Y+    +GLD    ++D++NAP  S  +LHACAHNPTG DP+ +QWK+I+  +K +   P
Sbjct:   70 EYLPILGLAEFRSCASRLALGDDSPALKEKRVGGVQSLGGTGALRIGADFLARWYNGTNNKNTPVYVSSPTWENHNAVFSAAGFKDIRSYRYWDAEKRGLDLQGFLNDLENAPEFSIIVLHACAHNPTGTDPTPEQWKQIASVMKHRFLFP 220          
BLAST of DY258653 vs. ExPASy Swiss-Prot
Match: AATC_RAT (Aspartate aminotransferase, cytoplasmic OS=Rattus norvegicus GN=Got1 PE=1 SV=3)

HSP 1 Score: 123.635 bits (309), Expect = 2.308e-27
Identity = 59/151 (39.07%), Postives = 93/151 (61.59%), Query Frame = 2
Query:  479 EYLPMGGSVKMVEETLKLAYGDNSEFIKDKRIAAVQSLSGTGACRLFADFQKRFH-----PDSQIYIPVPTWSNHHNIWRDAHVTX-RTFHYYHPGTKGLDFAALMDDIKNAPNGSFFLLHACAHNPTGVDPSKDQWKEISYQIKEKGTSP 913
            EYLP+ G  +      +L  GDNS  +++ R+  VQSL GTGA R+ ADF  R++      ++ +Y+  PTW NH+ ++  A     R++ Y+    +GLD    ++D++NAP  S F+LHACAHNPTG DP++++WK+I+  +K +   P
Sbjct:   70 EYLPILGLAEFRSCASQLVLGDNSPALRENRVGGVQSLGGTGALRIGADFLGRWYNGTDNKNTPVYVSSPTWENHNGVFSAAGFKDIRSYRYWDAEKRGLDLQGFLNDLENAPEFSIFVLHACAHNPTGTDPTEEEWKQIAAVMKRRFLFP 220          
BLAST of DY258653 vs. ExPASy Swiss-Prot
Match: AAT_HAEIN (Aspartate aminotransferase OS=Haemophilus influenzae GN=aspC PE=3 SV=1)

HSP 1 Score: 122.479 bits (306), Expect = 5.141e-27
Identity = 58/150 (38.67%), Postives = 85/150 (56.67%), Query Frame = 2
Query:  476 REYLPMGGSVKMVEETLKLAYGDNSEFIKDKRIAAVQSLSGTGACRLFADFQKRFHPDSQIYIPVPTWSNHHNIWRDAHVTXRTFHYYHPGTKGLDFAALMDDIKNAPNGSFFLLHACAHNPTGVDPSKDQWKEISYQIKEKGTSPSLEW 925
            + YL + G     E+T  L +G +SE I+  R   VQSL GTGA R+ A+F KR      ++I  PTW NH+ I+    +T R + YY    K LD+  L++D+  A  G   LLH C HNPTG+DP+ +QW+E++    + G  P  ++
Sbjct:   63 KNYLTIDGIADYNEQTKALLFGKDSEVIQSNRARTVQSLGGTGALRIAAEFIKRQTKAQNVWISTPTWPNHNAIFNAVGMTIREYRYYDAERKALDWEHLLEDLSQASEGDVVLLHGCCHNPTGIDPTPEQWQELAALSAKNGWLPLFDF 212          
BLAST of DY258653 vs. ExPASy Swiss-Prot
Match: AATC_SCHPO (Aspartate aminotransferase, cytoplasmic OS=Schizosaccharomyces pombe GN=aat2 PE=2 SV=1)

HSP 1 Score: 121.709 bits (304), Expect = 8.769e-27
Identity = 55/137 (40.15%), Postives = 82/137 (59.85%), Query Frame = 2
Query:  479 EYLPMGGSVKMVEETLKLAYGDNSEFIKDKRIAAVQSLSGTGACRLFADFQKRF---HPDSQIYIPVPTWSNHHNIWRDAHVTXRTFHYYHPGTKGLDFAALMDDIKNAPNGSFFLLHACAHNPTGVDPSKDQWKEI 880
            EYLP+ G  +  +   ++ +  N   + + R+A++QS+SGTGA  L A F + F   H  + +YI  PTW  H  +W    VT  T+ Y+    +  D+  ++  IK+AP GS FLLHACAHNPTG+DP+++QW  I
Sbjct:   69 EYLPIAGLPRFTKAAAEVLFRPNPHLLSEDRVASMQSVSGTGANFLAASFIETFYVKHTGAHVYISNPTWPVHRTLWEKLGVTVDTYPYWDAKNRSFDYEGMLSTIKSAPEGSIFLLHACAHNPTGIDPTREQWLSI 205          
BLAST of DY258653 vs. ExPASy Swiss-Prot
Match: AATC_MOUSE (Aspartate aminotransferase, cytoplasmic OS=Mus musculus GN=Got1 PE=1 SV=2)

HSP 1 Score: 121.324 bits (303), Expect = 1.145e-26
Identity = 61/151 (40.40%), Postives = 91/151 (60.26%), Query Frame = 2
Query:  479 EYLPMGGSVKMVEETLKLAYGDNSEFIKDKRIAAVQSLSGTGACRLFADFQKRFH-----PDSQIYIPVPTWSNHHNIWRDAHVTX-RTFHYYHPGTKGLDFAALMDDIKNAPNGSFFLLHACAHNPTGVDPSKDQWKEISYQIKEKGTSP 913
            EYLP+ G  +      +L  GDNS  I++ R+  VQSL GTGA R+ ADF  R++      ++ IY+  PTW NH+ ++  A     R + Y+    +GLD    ++D++NAP  S F+LHACAHNPTG DP+ +QWK+I+  ++ +   P
Sbjct:   70 EYLPILGLAEFRSCASRLVLGDNSPAIRENRVGGVQSLGGTGALRIGADFLGRWYNGTDNKNTPIYVSSPTWENHNAVFSAAGFKDIRPYCYWDAEKRGLDLQGFLNDLENAPEFSIFVLHACAHNPTGTDPTPEQWKQIAAVMQRRFLFP 220          
BLAST of DY258653 vs. ExPASy Swiss-Prot
Match: AAT_PSEAE (Aspartate aminotransferase OS=Pseudomonas aeruginosa GN=aspC PE=3 SV=2)

HSP 1 Score: 119.013 bits (297), Expect = 5.684e-26
Identity = 57/149 (38.26%), Postives = 84/149 (56.38%), Query Frame = 2
Query:  476 REYLPMGGSVKMVEETLKLAYGDNSEFIKDKRIAAVQSLSGTGACRLFADFQKRFHPDSQIYIPVPTWSNHHNIWRDAHVTXRTFHYYHPGTKGLDFAALMDDIKNAPNGSFFLLHACAHNPTGVDPSKDQWKEISYQIKEKGTSPSLE 922
            R YLP+ G     +   KL +G+ SE +   R+   Q++ GTGA +L ADF KR  PD+ + I  P+W NH  ++  A    + + YY   + G++ A L++D+   P  S  +LHAC HNPTGVD   D WK++   +K KG  P L+
Sbjct:   65 RGYLPIEGIAAYDQGVQKLLFGNESELLAAGRVVTTQAVGGTGALKLGADFLKRLLPDATVAISDPSWENHRALFEAAGFPVQNYRYYDAASNGVNRAGLLEDLNALPARSIVVLHACCHNPTGVDLELDDWKQVLDVLKAKGHVPFLD 213          
BLAST of DY258653 vs. ExPASy Swiss-Prot
Match: TYRB_ECOLI (Aromatic-amino-acid aminotransferase OS=Escherichia coli (strain K12) GN=tyrB PE=1 SV=1)

HSP 1 Score: 109.383 bits (272), Expect = 4.503e-23
Identity = 54/147 (36.73%), Postives = 80/147 (54.42%), Query Frame = 2
Query:  482 YLPMGGSVKMVEETLKLAYGDNSEFIKDKRIAAVQSLSGTGACRLFADFQKRFHPDSQIYIPVPTWSNHHNIWRDAHVTXRTFHYYHPGTKGLDFAALMDDIKNAPNGSFFLLHACAHNPTGVDPSKDQWKEISYQIKEKGTSPSLE 922
            YLPM G          L +G +   +K +R+A +Q+L G+GA ++ ADF KR+ P+S +++  PTW NH  I+  A     T+ +Y   T G+ F  L+  +K  P  S  LLH C HNPTG D + DQW  +   +K +   P L+
Sbjct:   66 YLPMEGLNCYRHAIAPLLFGADHPVLKQQRVATIQTLGGSGALKVGADFLKRYFPESGVWVSDPTWENHVAIFAGAGFEVSTYPWYDEATNGVRFNDLLATLKTLPARSIVLLHPCCHNPTGADLTNDQWDAVIEILKARELIPFLD 212          
BLAST of DY258653 vs. ExPASy Swiss-Prot
Match: AAT_SALTI (Aspartate aminotransferase OS=Salmonella typhi GN=aspC PE=3 SV=2)

HSP 1 Score: 108.612 bits (270), Expect = 7.682e-23
Identity = 52/150 (34.67%), Postives = 79/150 (52.67%), Query Frame = 2
Query:  476 REYLPMGGSVKMVEETLKLAYGDNSEFIKDKRIAAVQSLSGTGACRLFADFQKRFHPDSQIYIPVPTWSNHHNIWRDAHVTXRTFHYYHPGTKGLDFAALMDDIKNAPNGSFFLLHACAHNPTGVDPSKDQWKEISYQIKEKGTSPSLEW 925
            + YL + G  +    T +L +G  S  I DKR    Q+  GTGA R+ ADF  +  P  ++++  P+W NH +++  A +  R + YY      LDF AL   +  A  G   L H C HNPTG+DP+ +QW+ ++    EKG  P  ++
Sbjct:   63 KNYLGIDGIPEFARCTQELLFGKGSALINDKRARTAQTPGGTGALRIAADFLAKNTPVKRVWVSNPSWPNHKSVFNAAGLEVREYAYYDAENHSLDFEALQASLSEAQAGDVVLFHGCCHNPTGIDPTLEQWQVLAELSVEKGWLPLFDF 212          
BLAST of DY258653 vs. ExPASy Swiss-Prot
Match: AAT_SALTY (Aspartate aminotransferase OS=Salmonella typhimurium GN=aspC PE=3 SV=1)

HSP 1 Score: 107.842 bits (268), Expect = 1.310e-22
Identity = 52/150 (34.67%), Postives = 79/150 (52.67%), Query Frame = 2
Query:  476 REYLPMGGSVKMVEETLKLAYGDNSEFIKDKRIAAVQSLSGTGACRLFADFQKRFHPDSQIYIPVPTWSNHHNIWRDAHVTXRTFHYYHPGTKGLDFAALMDDIKNAPNGSFFLLHACAHNPTGVDPSKDQWKEISYQIKEKGTSPSLEW 925
            + YL + G  +    T +L +G  S  I DKR    Q+  GTGA R+ ADF  +  P  ++++  P+W NH +++  A +  R + YY      LDF AL   +  A  G   L H C HNPTG+DP+ +QW+ ++    EKG  P  ++
Sbjct:   63 KNYLGIDGIPEFARCTQELLFGKGSALINDKRARTAQTPGGTGALRIAADFLAKNTPVKRVWVSNPSWPNHKSVFNAAGLEVREYAYYDAENHTLDFEALQASLSEAQAGDVVLFHGCCHNPTGIDPTLEQWQVLAELSVEKGWLPLFDF 212          
BLAST of DY258653 vs. ExPASy Swiss-Prot
Match: AAT_ECOLI (Aspartate aminotransferase OS=Escherichia coli (strain K12) GN=aspC PE=1 SV=1)

HSP 1 Score: 105.916 bits (263), Expect = 4.979e-22
Identity = 51/150 (34.00%), Postives = 80/150 (53.33%), Query Frame = 2
Query:  476 REYLPMGGSVKMVEETLKLAYGDNSEFIKDKRIAAVQSLSGTGACRLFADFQKRFHPDSQIYIPVPTWSNHHNIWRDAHVTXRTFHYYHPGTKGLDFAALMDDIKNAPNGSFFLLHACAHNPTGVDPSKDQWKEISYQIKEKGTSPSLEW 925
            + YL + G  +    T +L +G  S  I DKR    Q+  GTGA R+ ADF  +     ++++  P+W NH +++  A +  R + YY      LDF AL++ +  A  G   L H C HNPTG+DP+ +QW+ ++    EKG  P  ++
Sbjct:   63 KNYLGIDGIPEFGRCTQELLFGKGSALINDKRARTAQTPGGTGALRVAADFLAKNTSVKRVWVSNPSWPNHKSVFNSAGLEVREYAYYDAENHTLDFDALINSLNEAQAGDVVLFHGCCHNPTGIDPTLEQWQTLAQLSVEKGWLPLFDF 212          
The following BLAST results are available for this feature:
BLAST of DY258653 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 47
Match NameE-valueIdentityDescription
AATC_MACFA1.353e-2740.40Aspartate aminotransferase, cytoplasmic OS=Macaca ... [more]
AATC_RAT2.308e-2739.07Aspartate aminotransferase, cytoplasmic OS=Rattus ... [more]
AAT_HAEIN5.141e-2738.67Aspartate aminotransferase OS=Haemophilus influenz... [more]
AATC_SCHPO8.769e-2740.15Aspartate aminotransferase, cytoplasmic OS=Schizos... [more]
AATC_MOUSE1.145e-2640.40Aspartate aminotransferase, cytoplasmic OS=Mus mus... [more]
AAT_PSEAE5.684e-2638.26Aspartate aminotransferase OS=Pseudomonas aerugino... [more]
TYRB_ECOLI4.503e-2336.73Aromatic-amino-acid aminotransferase OS=Escherichi... [more]
AAT_SALTI7.682e-2334.67Aspartate aminotransferase OS=Salmonella typhi GN=... [more]
AAT_SALTY1.310e-2234.67Aspartate aminotransferase OS=Salmonella typhimuri... [more]
AAT_ECOLI4.979e-2234.00Aspartate aminotransferase OS=Escherichia coli (st... [more]

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Properties
Property NameValue
Genbank descriptionKN0AAI2DE02FM1 AbsDev1 Citrus clementina cDNA 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DY258653 ID=DY258653; Name=DY258653; organism=Citrus clementina; type=EST; length=1218bp
CTACTTTGTTAAGTAATTTGTTCTTTACTCCATGTGAATGTCTCAGCTTC
TCCAAAATACAGTTGCCAAGTTCCAGGAATGTAAAATATATCCCTACCAT
ATGCCCCTAGAAGCTGTGATATGTCAAAGGGCAATGAGTACATTTTTGGA
AATTTAATTCTAGGAGATTAAGAACACCTTCAACGAGGGAAATACATTTG
TACACATTTCTCTTCTTTTTGGGCAAACTACACTAGGTGCAAATTACCAC
TGCCCTAATCTCTCCTAGCTTCCTTATAAGTGTGAGTTTGTGTGAGCATA
GAACATCTGTTACTTCTATTCATTACCCCTCCCTTCCTTTTTCTGCCTTT
TCCTGCCCTTCTTGAAGGACGGTTGAGCTGGTTGTATAAGTAATTGGATA
GGGTTGCTTTGAAATTTTTATCCTCCTCTTATTAATATTATAATTTCGGT
TTCCAAATTATGAATATTTTGGTTCAGGGAGTATCTTCCTATGGGAGGGA
GTGTGAAAATGGTGGAGGAAACTCTGAAGCTCGCCTATGGAGATAATTCT
GAGTTCATCAAGGATAAAAGGATAGCAGCTGTACAATCTCTCTCAGGGAC
TGGTGCATGCCGACTTTTTGCAGACTTTCAGAAGCGTTTTCATCCTGATT
CTCAAATCTACATACCTGTCCCAACATGGTCCAACCACCATAACATCTGG
AGAGATGCCCATGTCACTCANAGGACTTTTCATTACTATCACCCTGGGAC
TAAGGGTTTAGATTTTGCAGCACTGATGGATGACATTAAGAATGCACCCA
ATGGTTCATTCTTTCTACTTCATGCTTGTGCTCACAATCCCACTGGAGTG
GATCCTTCAAAGGACCAATGGAAAGAGATCTCATACCAAATAAAGGAAAA
AGGCACTTCCCCATCCTTGGAATGGCGTAACAGGTTTTTGCCCGTGGTGA
TCCGGAAAAAAATGCCCAGGCCATCCCAATTTTTTCCCAAGGAGGGCCCC
TAATTTGGATTAACCCAGTCCAAATGCAAAAAAAATAGGAATCCTATGGC
CCAAAAGAAAGAAAGCCTTTATGGTCATTGTAAAAAAAAAAAAAACAAAG
CAGGGGGTTGTTAAAAAATCCAATTTTGCACCCACCTTTGCCCGGGCCCC
CGGTAACACAAAATCCCCCCCTGGTTTCTGGGGGGCCCCTCCATAAACTC
CCCCCCCCCCCCTCTTGG
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