DY258663

Overview
NameDY258663
Unique NameDY258663
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length1265
Libraries
Library NameType
AbsDev1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
DY258663_ssr5 microsatellite DY258663_ssr5:5..18. BLAST: Citrus ESTs to Prunus persica proteins V1
Ccv1_Contig10138 contig Ccv1_Contig10138:3..1267. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of DY258663 vs. ExPASy Swiss-Prot
Match: PLD_PHYIN (Phospholipase D OS=Phytophthora infestans GN=PLD PE=3 SV=1)

HSP 1 Score: 103.605 bits (257), Expect = 2.590e-21
Identity = 73/235 (31.06%), Postives = 118/235 (50.21%), Query Frame = 2
Query:  122 VVIDKSIQTAYIQAIRSAQHFIYIENQYFLGSSYAWPSYKNAGADNLIPMELALKIASKIRANERFAVYVIIPMWP--EGDPKTN---TVQEILFWQSQTMQMMYSVVAQELREMQVDAHPQDYLSFYCLGKREEAPKDVLANNGDKVSDSQKNQRFMIYVHAKGMIVDDEYVIMGSANINQRSMAGSKDTEIAMGSYQPHHTWARKQKHPHGQ---IYGYRKSLWSEHLGMLDN 802
            V  + SIQ AY+  I +++HF+YIENQ+F+          N    N I   L  +I   ++ +E+F VYV++P+ P  EG+ +++    +  ++ WQ  T+      + + L+   V  HP++Y++F+ L K    P    A                IY+H+K MI DD   I+GSANIN RSM G +D+EIA+      +      + P+ +       R  L+ EHLG+ D+
Sbjct: 1113 VPTEASIQAAYMDVIANSKHFLYIENQFFVSGMDG-----NGIVRNRILQALVDRIERAVQRDEKFRVYVVMPLLPAFEGNIRSHELTNLHAVMHWQFATICRGRYSLFEALKG--VTNHPENYVAFFGLRKYGIMPNGCAATE-------------QIYIHSKLMIADDRCAILGSANINDRSMNGDRDSEIALVIEDMQYEDGVMNEKPYRRGVAASKLRLQLFREHLGLADD 1327          
BLAST of DY258663 vs. ExPASy Swiss-Prot
Match: PLDP1_ARATH (Phospholipase D p1 OS=Arabidopsis thaliana GN=PLDP1 PE=2 SV=1)

HSP 1 Score: 102.449 bits (254), Expect = 5.769e-21
Identity = 81/231 (35.06%), Postives = 116/231 (50.22%), Query Frame = 2
Query:  128 IDKSIQTAYIQAIRSAQHFIYIENQYFLGSSYAWPSYKNAGADNLIPMELALKIASKIRANERFAVYVIIPMWPE-----GDPKTNTVQEILFWQSQTMQMMYSVVAQEL-REMQVDAHPQDYLSFYCLGKREEAPKDVLANNGDKVSDSQKNQRFMIYVHAKGMIVDDEYVIMGSANINQRSMAGSKDTEIAMGSYQPHHTWARKQKHP--HGQI-YGYRKSLWSEHLGM 793
            +++SI +AY   I  A+HFIYIENQ+F+       + KN   + L    L      KI     F V V+IP+ P       D    +V+ I+ WQ +T+   ++ +   L   + V AH  DY+SFY L    +  +D        V+ SQ      +YVH+K MIVDD   ++GSANIN RS+ GS+D+EI +         +R    P   G+     R SLWSEHLG+
Sbjct:  756 VEESIHSAYRSLIDKAEHFIYIENQFFISGLSGDDTVKNRVLEALYKRILRAHNEKKI-----FRVVVVIPLLPGFQGGIDDSGAASVRAIMHWQYRTIYRGHNSILTNLYNTIGVKAH--DYISFYGLRAYGKLSED------GPVATSQ------VYVHSKIMIVDDRAALIGSANINDRSLLGSRDSEIGVLIEDTELVDSRMAGKPWKAGKFSSSLRLSLWSEHLGL 967          
BLAST of DY258663 vs. ExPASy Swiss-Prot
Match: PLDB_DICDI (Phospholipase D B OS=Dictyostelium discoideum GN=pldB PE=2 SV=1)

HSP 1 Score: 100.908 bits (250), Expect = 1.678e-20
Identity = 67/228 (29.39%), Postives = 111/228 (48.68%), Query Frame = 2
Query:  128 IDKSIQTAYIQAIRSAQHFIYIENQYFLGSSYAWPSYKNAGADNLIPMELALKIASKIRANERFAVYVIIPMWPEGDPKTNTVQEILFWQSQTMQMMYSVVAQELREMQVDAHPQDYLSFYCLGKREEAPKDVLANNGDKVSDSQKNQRFMIYVHAKGMIVDDEYVIMGSANINQRSMAGSKDTEIAMGSYQPHHTWARKQKHPH--GQI-YGYRKSLWSEHLGMLDN 802
            ++ S   AY+  I++AQHFIYI+N +F+ S        +    N I + +  ++   I   E+F V +++P+ P GD    + + I+ W ++T+      + + L+    D     Y+SF  + + E         NGD++   Q      IYVH+K +IVDD   ++GS NIN RSM GS+D+E+A+               P   G+  +  R  LW  HL + D+
Sbjct:  907 VEDSCYKAYLGLIKNAQHFIYIQNLFFISSC------GSKLPKNRIALAILNRVRRAITLKEKFRVIIMVPISPSGDLALASSRMIIGWTNRTISQGGQSILELLKNEFPDVDLDQYISFNSIRQWEA--------NGDRIFTEQ------IYVHSKVLIVDDRVAVIGSCNINDRSMMGSRDSELAVVVSDQSKLLITMNGKPFKVGKFPHTLRVGLWKTHLNLTDS 1114          
BLAST of DY258663 vs. ExPASy Swiss-Prot
Match: PLDP2_ARATH (Phospholipase D p2 OS=Arabidopsis thaliana GN=PLDP2 PE=2 SV=2)

HSP 1 Score: 100.138 bits (248), Expect = 2.863e-20
Identity = 76/229 (33.19%), Postives = 112/229 (48.91%), Query Frame = 2
Query:  131 DKSIQTAYIQAIRSAQHFIYIENQYFLGSSYAWPSYKNAGADNLIPMELALKIASKIRANERFAVYVIIPMWPE-----GDPKTNTVQEILFWQSQTMQMMYSVVAQELREMQVDAHPQDYLSFYCLGKREEAPKDVLANNGDKVSDSQKNQRFMIYVHAKGMIVDDEYVIMGSANINQRSMAGSKDTEIAMGSYQPH--HTWARKQKHPHGQI-YGYRKSLWSEHLGM 793
            + SI  AY   I++A+HFIYIENQ+F+         K     N +   L  +I      N+ F V ++IP+ P       D    TV+ ++ WQ +T+    + +   L  + +    QDY+SFY L       +D        ++ SQ      IYVH+K MIVDD   ++GS+NIN RS+ GS+D+EI +         +     K   G+  Y  R SLWSEHLG+
Sbjct:  712 EDSIHRAYCSLIQNAEHFIYIENQFFISGLE-----KEDTILNRVLEALYRRILKAHEENKCFRVVIVIPLLPGFQGGIDDFGAATVRALMHWQYRTISREGTSILDNLNAL-LGPKTQDYISFYGLRSYGRLFED------GPIATSQ------IYVHSKLMIVDDRIAVIGSSNINDRSLLGSRDSEIGVVIEDKEFVESSMNGMKWMAGKFSYSLRCSLWSEHLGL 922          
BLAST of DY258663 vs. ExPASy Swiss-Prot
Match: PLDC_DICDI (Phospholipase D C OS=Dictyostelium discoideum GN=pldC PE=3 SV=1)

HSP 1 Score: 98.9821 bits (245), Expect = 6.378e-20
Identity = 72/230 (31.30%), Postives = 115/230 (50.00%), Query Frame = 2
Query:  125 VIDKSIQTAYIQAIRSAQHFIYIENQYFLGS-SYAWPSYKNAGADNLIPMELALKIASKIRANERFAVYVIIPMWPEGDPKTNTVQEILFWQSQTMQMMYSVVAQELREMQVDAHPQDYLSFYCLGKREEAPKDVLANNGDKVSDSQKNQRFMIYVHAKGMIVDDEYVIMGSANINQRSMAGSKDTEIAMGSYQPHHTWARKQKHPHGQ---IYGYRKSLWSEHLGMLDN 802
            V++ SI  AY+  I  +QHFIYI+NQ+F+ S  +  P+       N I   +  +I   +  N+ F V +++P+  EGD      Q I+ +  +++  + + + ++  EM +D     YLS   L   +         NGD +   Q      IYVH+K +IVDD+  I+GSANIN RS+ GS+D+EI           +R    P+      +  R +LW  HLG++ N
Sbjct: 1334 VLENSIYKAYLNLINLSQHFIYIQNQFFISSVGFTQPN-------NQIAFAIYKRIEKAVLLNQVFRVILLLPVHCEGDIYDVDTQLIIKYTEKSITGIKTELLKKFPEMDID----QYLSINSLRNWDA--------NGDIIFTEQ------IYVHSKVLIVDDKIAIIGSANINDRSLNGSRDSEICAIIEDRDLVDSRVNGLPYKAAKFAHNLRCNLWEYHLGLISN 1538          
BLAST of DY258663 vs. ExPASy Swiss-Prot
Match: PLD1_MOUSE (Phospholipase D1 OS=Mus musculus GN=Pld1 PE=1 SV=1)

HSP 1 Score: 95.1301 bits (235), Expect = 9.210e-19
Identity = 65/192 (33.85%), Postives = 105/192 (54.69%), Query Frame = 2
Query:  131 DKSIQTAYIQAIRSAQHFIYIENQYFLGSSYAWPSYKNAGADNLIPMELALKIASKIRANERFAVYVIIPMWP--EGDPKT---NTVQEILFWQSQTMQMMYSVVAQELREMQVDAHPQDYLSFYCLGKREEAPKDVLANNGDKVSDSQKNQRFMIYVHAKGMIVDDEYVIMGSANINQRSMAGSKDTEIAM 691
            ++SI  AYI  I +++H+IYIENQ+F+  +     +   G        +A +I    R  +R+ VY++IP+ P  EGD  T   N +Q I+ +  +TM    S + ++L+  ++     +Y+SF  L    E         G+ V++       +IYVH+K +I DD  VI+GSANIN RSM G +D+E+A+
Sbjct:  759 EESIHAAYIHVIENSKHYIYIENQFFISCADDKVVFNKVGD------RIAQRILKAHREGQRYRVYIVIPLLPGFEGDISTGGGNALQAIMHFNYRTMCRGESSILEQLKP-ELGNKWINYISFCGLRTHAEL-------EGNLVTE-------LIYVHSKLLIADDNTVIIGSANINDRSMLGKRDSEMAV 929          
BLAST of DY258663 vs. ExPASy Swiss-Prot
Match: PLD1_HUMAN (Phospholipase D1 OS=Homo sapiens GN=PLD1 PE=1 SV=1)

HSP 1 Score: 93.9745 bits (232), Expect = 2.052e-18
Identity = 65/192 (33.85%), Postives = 106/192 (55.21%), Query Frame = 2
Query:  131 DKSIQTAYIQAIRSAQHFIYIENQYFLGSSYAWPSYKNAGADNLIPMELALKIASKIRANERFAVYVIIPMWP--EGDPKT---NTVQEILFWQSQTMQMMYSVVAQELREMQVDAHPQDYLSFYCLGKREEAPKDVLANNGDKVSDSQKNQRFMIYVHAKGMIVDDEYVIMGSANINQRSMAGSKDTEIAM 691
            ++SI  AY+  I +++H+IYIENQ+F+  +       +    N I   +A +I    R N+++ VYV+IP+ P  EGD  T   N +Q I+ +  +TM    + +  +L+  ++     +Y+SF  L    E         G+ V++       +IYVH+K +I DD  VI+GSANIN RSM G +D+E+A+
Sbjct:  759 EESIHAAYVHVIENSRHYIYIENQFFISCA------DDKVVFNKIGDAIAQRILKAHRENQKYRVYVVIPLLPGFEGDISTGGGNALQAIMHFNYRTMCRGENSILGQLKA-ELGNQWINYISFCGLRTHAEL-------EGNLVTE-------LIYVHSKLLIADDNTVIIGSANINDRSMLGKRDSEMAV 929          
BLAST of DY258663 vs. ExPASy Swiss-Prot
Match: PLD1_RAT (Phospholipase D1 OS=Rattus norvegicus GN=Pld1 PE=1 SV=3)

HSP 1 Score: 93.2041 bits (230), Expect = 3.500e-18
Identity = 64/192 (33.33%), Postives = 105/192 (54.69%), Query Frame = 2
Query:  131 DKSIQTAYIQAIRSAQHFIYIENQYFLGSSYAWPSYKNAGADNLIPMELALKIASKIRANERFAVYVIIPMWP--EGDPKT---NTVQEILFWQSQTMQMMYSVVAQELREMQVDAHPQDYLSFYCLGKREEAPKDVLANNGDKVSDSQKNQRFMIYVHAKGMIVDDEYVIMGSANINQRSMAGSKDTEIAM 691
            ++SI  AY   I +++H+IYIENQ+F+  +       +    N +   +A +I    R  +R+ VY++IP+ P  EGD  T   N +Q I+ +  +TM    S + ++L+  ++     +Y+SF  L    E         G+ V++       +IYVH+K +I DD  VI+GSANIN RSM G +D+E+A+
Sbjct:  759 EESIHAAYTHVIENSKHYIYIENQFFISCA------DDKVVFNKVGNAIAQRILKAHREGQRYRVYIVIPLLPGFEGDISTGGGNALQAIMHFNYRTMCRGESSILEQLKP-ELGNKWINYISFCGLRTHAEL-------EGNLVTE-------LIYVHSKLLIADDNTVIIGSANINDRSMLGKRDSEMAV 929          
BLAST of DY258663 vs. ExPASy Swiss-Prot
Match: PLD1_CRIGR (Phospholipase D1 OS=Cricetulus griseus GN=PLD1 PE=2 SV=1)

HSP 1 Score: 91.6633 bits (226), Expect = 1.018e-17
Identity = 64/192 (33.33%), Postives = 104/192 (54.17%), Query Frame = 2
Query:  131 DKSIQTAYIQAIRSAQHFIYIENQYFLGSSYAWPSYKNAGADNLIPMELALKIASKIRANERFAVYVIIPMWP--EGDPKT---NTVQEILFWQSQTMQMMYSVVAQELREMQVDAHPQDYLSFYCLGKREEAPKDVLANNGDKVSDSQKNQRFMIYVHAKGMIVDDEYVIMGSANINQRSMAGSKDTEIAM 691
            ++SI +AYI  I +++H+IYIENQ+F+  +     +   G        +A +I    R  +R+ VY++IP  P  EGD  T   N +Q I+ +  +TM    + +  +L+  ++     +Y+SF  L    E         G+ V++       +IYVH+K +I DD  VI+GSANIN RSM G +D+E+A+
Sbjct:  721 EESIHSAYINVIENSKHYIYIENQFFISCADDKVVFNKVGD------AIAQRILKAHREGQRYRVYIVIPRLPGFEGDISTGGGNALQAIMHFNYRTMCRGENSILGQLKP-ELGNQWINYISFCGLRTHAEL-------EGNLVTE-------LIYVHSKLLIADDNTVIIGSANINDRSMLGKRDSEMAV 891          
BLAST of DY258663 vs. ExPASy Swiss-Prot
Match: PLD2_RAT (Phospholipase D2 OS=Rattus norvegicus GN=Pld2 PE=1 SV=2)

HSP 1 Score: 90.5077 bits (223), Expect = 2.269e-17
Identity = 64/193 (33.16%), Postives = 98/193 (50.78%), Query Frame = 2
Query:  128 IDKSIQTAYIQAIRSAQHFIYIENQYFLGSSYAWPSYKNAGADNLIPMELALKIASKIRANERFAVYVIIPMWP--EGDPKT---NTVQEILFWQSQTMQMMYSVVAQELREMQVDAHPQDYLSFYCLGKREEAPKDVLANNGDKVSDSQKNQRFMIYVHAKGMIVDDEYVIMGSANINQRSMAGSKDTEIAM 691
            ++ SI  AY+  IR +QHF+YIENQ+F+  S         G       E+  +I       + F VYV++P+ P  EGD  T   N++Q IL +  +T+      +   L+     A  +DY+S   L    E         G  +S+       +IY+H+K +I DD  VI+GSANIN RS+ G +D+E+A+
Sbjct:  618 LESSILNAYLHTIRESQHFLYIENQFFISCSDGRTVLNKVGD------EIVDRILKAHEQGQCFRVYVLLPLLPGFEGDISTGGGNSIQAILHFTYRTLCRGEYSILHRLKAAMGTAW-RDYMSICGLRTHGEL-------GGHPISE-------LIYIHSKLLIADDRTVIIGSANINDRSLLGKRDSELAI 789          
The following BLAST results are available for this feature:
BLAST of DY258663 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 35
Match NameE-valueIdentityDescription
PLD_PHYIN2.590e-2131.06Phospholipase D OS=Phytophthora infestans GN=PLD P... [more]
PLDP1_ARATH5.769e-2135.06Phospholipase D p1 OS=Arabidopsis thaliana GN=PLDP... [more]
PLDB_DICDI1.678e-2029.39Phospholipase D B OS=Dictyostelium discoideum GN=p... [more]
PLDP2_ARATH2.863e-2033.19Phospholipase D p2 OS=Arabidopsis thaliana GN=PLDP... [more]
PLDC_DICDI6.378e-2031.30Phospholipase D C OS=Dictyostelium discoideum GN=p... [more]
PLD1_MOUSE9.210e-1933.85Phospholipase D1 OS=Mus musculus GN=Pld1 PE=1 SV=1[more]
PLD1_HUMAN2.052e-1833.85Phospholipase D1 OS=Homo sapiens GN=PLD1 PE=1 SV=1[more]
PLD1_RAT3.500e-1833.33Phospholipase D1 OS=Rattus norvegicus GN=Pld1 PE=1... [more]
PLD1_CRIGR1.018e-1733.33Phospholipase D1 OS=Cricetulus griseus GN=PLD1 PE=... [more]
PLD2_RAT2.269e-1733.16Phospholipase D2 OS=Rattus norvegicus GN=Pld2 PE=1... [more]

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Properties
Property NameValue
Genbank descriptionKN0AAI2DG02FM1 AbsDev1 Citrus clementina cDNA 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DY258663 ID=DY258663; Name=DY258663; organism=Citrus clementina; type=EST; length=1265bp
TCTGTCTCTCTCTCTCTCTTTTGGGTCACAGATTTTCCGGTCCATAGACT
CAGGATCAGTGAAAGGATTTCCAAAATCTATTGAGGACATTGATGACCAG
AGCCTTATCTGTGCAAAAGATGTGGTGATAGATAAGAGCATTCAAACAGC
TTATATCCAAGCAATCAGATCTGCTCAGCATTTTATATATATTGAAAATC
AGTATTTTCTTGGATCATCTTATGCATGGCCATCGTATAAAAATGCAGGA
GCTGATAATCTTATCCCGATGGAGTTGGCTTTAAAGATTGCTAGTAAAAT
TAGAGCTAATGAGAGATTTGCAGTGTATGTCATCATACCTATGTGGCCTG
AGGGTGATCCCAAAACTAACACCGTCCAAGAAATTCTGTTTTGGCAGAGC
CAGACGATGCAGATGATGTATAGTGTTGTTGCACAGGAACTGAGGGAAAT
GCAAGTGGACGCACATCCTCAAGATTACCTCAGTTTTTATTGTCTCGGAA
AACGGGAAGAAGCTCCTAAGGATGTATTGGCCAATAATGGTGATAAGGTC
TCTGATTCACAGAAAAATCAGCGCTTCATGATATATGTGCATGCCAAGGG
GATGATAGTAGATGATGAATATGTGATCATGGGATCTGCCAACATTAACC
AAAGATCCATGGCTGGTTCCAAAGACACTGAGATAGCTATGGGTTCTTAT
CAGCCGCATCACACATGGGCTAGGAAGCAGAAACATCCACATGGTCAGAT
ATATGGGTATAGGAAGTCACTTTGGTCAGAGCATCTTGGCATGCTAGATA
ATTGCTTTGAGGAACAGAAAGTTTAGACTGTATAAGGGAGGTAAATCAGA
TTGCTGGAAAAAACTGGGGTAGATTCCCGCCCCGGAGTTCCACCCTTGCA
GGGCCACCTCCTCAAATTTCCTCTGCAGTAAAAGCTGATGGGAAATGGAA
CCCCCTTACCAGTTATGAACAATTCCCTGAATCCGGGGGGAAAAAACATT
GGGGGTTTCTTCCCTTGAGTCTTCCGTAATTGGTGGACACCCTGAATTCC
CCACCCGGTTTTTATTTTTAAAAAAAAAAAGGGGGAAAAAAAAAAAATTT
CAAGGGGGAAAAAAGAGGGGGTAAACCCGGGAATTTGGGGGGTTTCCCCC
TTTTGTGGAAAATTTTGTGAAAATTTTTTTTTTTAATAATTCCAGGAGAA
GATTTTTTCTTTTTTTTGTAAAAAATTTTATTTAATTATTTTTTTTTTTT
TTTTAAAAAAGTGTT
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