DY258677
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of DY258677 vs. ExPASy Swiss-Prot
Match: RL3_HALMA (50S ribosomal protein L3P OS=Haloarcula marismortui GN=rpl3p PE=1 SV=5) HSP 1 Score: 123.25 bits (308), Expect = 1.889e-27 Identity = 67/191 (35.08%), Postives = 108/191 (56.54%), Query Frame = 2 Query: 26 VRVLAHTQIRKMKGLKQKKAHLMEIQVNGGTIAEKVDYAYGFFEK--QIPVDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTRLPRKTHRG--LRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKVYKLGKGGQESHTGITEFDRTEKDITPMGGFPHYGIVKDDYLMIKGCCVGPKKRVVTLRQSL 586 +R++ HT + + +KK +ME +V GG++++++D+A E + ++ +F+ E D+ GVTKGKG +G V RWGV + K R R++ +G W+P+RV TV + GQ GYH RTE+NK++ +G+G + T GGF +YG V Y ++KG GP KR+V R ++ Sbjct: 141 LRLITHTVPDAVPSVPKKKPDVMETRVGGGSVSDRLDHALDIVEDGGEHAMNDIFRAGEYADVAGVTKGKGTQGPVKRWGVQKRKGKHARQGWRRRIGNLGPWNPSRVRSTVPQQGQTGYHQRTELNKRLIDIGEGDEP---------------TVDGGFVNYGEVDGPYTLVKGSVPGPDKRLVRFRPAV 316
BLAST of DY258677 vs. ExPASy Swiss-Prot
Match: RL3_METS5 (50S ribosomal protein L3P OS=Metallosphaera sedula (strain ATCC 51363 / DSM 5348) GN=rpl3p PE=3 SV=1) HSP 1 Score: 122.865 bits (307), Expect = 2.467e-27 Identity = 75/215 (34.88%), Postives = 117/215 (54.42%), Query Frame = 2 Query: 20 SVVRVLAHTQIRKMKGLKQKKAHLMEIQVNGGTIAEKVDYAYGFFEKQIPVDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTRLPR--KTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKVYKLGKGGQESHTGITEFDRTEKDITPMGGFPHYGIVKDDYLMIKGCCVGPKKRVVTLRQSLLKQTSRLALEEIKIKFIDTSSKFG 658 S R+L TQ + L +K ++E+Q+ GG +++Y + V VF++ +++DIIGVTKG G++GV+ R+GV LPR K +G RKV G V + GQ G+H RTE NK++ K+ D T K I P GGF YG+VK+ YL+++G +G KR + LR + +++L + K+ ++D +SK G Sbjct: 145 SYFRLLVSTQPHLIPALGKKTPDIVEVQIGGGNTKNQLEYGLKLLGNTLSVRDVFKEGQLMDIIGVTKGHGFQGVIKRYGVQELPRWHKHRKGSRKVGTKGP--SLGTPSYVPQPGQMGFHRRTEYNKRILKIS-------------DDT-KLINPKGGFVRYGLVKNTYLLVQGSTIGSIKRPLFLRYPIRPYSAQLPVP--KVTYVDVNSKQG 341
BLAST of DY258677 vs. ExPASy Swiss-Prot
Match: RL3_NANEQ (50S ribosomal protein L3P OS=Nanoarchaeum equitans GN=rpl3p PE=3 SV=1) HSP 1 Score: 122.479 bits (306), Expect = 3.222e-27 Identity = 69/212 (32.55%), Postives = 117/212 (55.19%), Query Frame = 2 Query: 17 ASVVRVLAHTQIRKMKGLKQKKAHLMEIQVNGGTIAEKVDYAYGFFEKQIPVDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTRLPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKVYKLGKGGQESHTGITEFDRTEKDITPMGGFPHYGIVKDDYLMIKGCCVGPKKRVVTLRQSLLKQTSRLALEEIKIKFIDTSSK 652 A V+++ TQ K+K +K + +I + G + +K++YA K++ ++ VF++ + +D+I VTKGKG++GV+ R+ V R K+ +G+RKV IG+ P R+ TV GQ GYH RTE NK + K+G + + GG+ YG V +++KG GP+KR++ LR+++ + +E I++I S K Sbjct: 130 ADEVKIIVSTQPWKIK--LKKTPEIFDIPIGGSDVNKKLEYALSLLGKELSINDVFKEGQYVDVIAVTKGKGFQGVIKRFHVHRRQHKSEKGVRKVGAIGSRGPGRIFPTVPMPGQMGYHRRTEYNKLIIKIG-----------------EPLNVEGGWVRYGQVIGPTILLKGSVPGPRKRLIILREAIRPPRKQEKVE--GIEYISLSPK 320
BLAST of DY258677 vs. ExPASy Swiss-Prot
Match: RL3_HALWD (50S ribosomal protein L3P OS=Haloquadratum walsbyi (strain DSM 16790) GN=rpl3p PE=3 SV=1) HSP 1 Score: 117.857 bits (294), Expect = 7.937e-26 Identity = 69/215 (32.09%), Postives = 115/215 (53.49%), Query Frame = 2 Query: 26 VRVLAHTQIRKMKGLKQKKAHLMEIQVNGGTIAEKVDYAYGFFEK--QIPVDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTRLPRKTHRG--LRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKVYKLGKGGQESHTGITEFDRTEKDITPMGGFPHYGIVKDDYLMIKGCCVGPKKRVVTLRQSLLKQTSRLALEEIKIKFIDTSSKFG 658 VR++ HT M+ + +K +ME +V GGT+ ++V++ + + +F+ E +D GVTKGKG +G V R+GV + K R R++ +G W+P+RV TV + GQ GYH RTE+NK++ ++G G + T GGF YG V Y +IKG GP +R++ R ++ + S + +++++ T+S G Sbjct: 141 VRLITHTLPAGMRNIPKKTPDVMETRVGGGTLTDRVEFGLDLISDGGEHEISDIFRAGEYLDAAGVTKGKGTQGPVKRFGVQKRKGKHARQGYRRRIGNLGPWNPSRVRSTVPQQGQTGYHQRTELNKRLIEIGNGDEP---------------TVDGGFVGYGEVDGPYALIKGSLPGPDQRLLRFRTAV--RPSDQPRLDPEVRYVSTASNQG 338 The following BLAST results are available for this feature:
BLAST of DY258677 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 84
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Sequences
The
following sequences are available for this feature:
EST sequence >DY258677 ID=DY258677; Name=DY258677; organism=Citrus clementina; type=EST; length=882bpback to top |