DY258679

Overview
NameDY258679
Unique NameDY258679
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length1307
Libraries
Library NameType
AbsDev1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Ccv1_Contig1199 contig Ccv1_Contig1199:1..1307. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of DY258679 vs. ExPASy Swiss-Prot
Match: PAL1_SOYBN (Phenylalanine ammonia-lyase 1 OS=Glycine max GN=PAL1 PE=3 SV=1)

HSP 1 Score: 129.798 bits (325), Expect = 3.531e-29
Identity = 73/112 (65.18%), Postives = 79/112 (70.54%), Query Frame = 2
Query:  371 ACSECVMESMHTGTDSYGVTTGFGVSSRRREEIRSALHKELIRLLNAGTFGNGI*SSHTLLHSAPMAAVLVRVITLLQG*SGIRFEILYPIP*CSITNCPPCLPLLGTIAAS 706
            A SE VM SM+ GTDSYGVTTGFG +S RR +   AL KELIR LNAG FGNG  SSHTL H+A  AA+LVR+ TLLQG SGIRFEIL  I      N  PCL L GTI AS
Sbjct:   89 ASSEWVMNSMNNGTDSYGVTTGFGATSHRRTKQGGALQKELIRFLNAGIFGNGTESSHTLPHTATRAAMLVRINTLLQGYSGIRFEILEAITKLLNNNVTPCLDLRGTITAS 200          
BLAST of DY258679 vs. ExPASy Swiss-Prot
Match: PALY_CAMSI (Phenylalanine ammonia-lyase OS=Camellia sinensis GN=PAL PE=2 SV=1)

HSP 1 Score: 129.028 bits (323), Expect = 6.023e-29
Identity = 73/112 (65.18%), Postives = 79/112 (70.54%), Query Frame = 2
Query:  371 ACSECVMESMHTGTDSYGVTTGFGVSSRRREEIRSALHKELIRLLNAGTFGNGI*SSHTLLHSAPMAAVLVRVITLLQG*SGIRFEILYPIP*CSITNCPPCLPLLGTIAAS 706
            A S+ VMESM+ GTDSYGVTTGFG +S RR +   AL KELIR LNAG FGNG  S HTL  SA  AA+LVR+ TLLQG SGIRFEIL  I      N  PCLPL GTI AS
Sbjct:   90 ASSDWVMESMNKGTDSYGVTTGFGATSHRRTKEGGALQKELIRFLNAGIFGNGTESCHTLPQSATRAAMLVRINTLLQGYSGIRFEILEAISKFLNNNITPCLPLRGTITAS 201          
BLAST of DY258679 vs. ExPASy Swiss-Prot
Match: PAL1_IPOBA (Phenylalanine ammonia-lyase OS=Ipomoea batatas GN=PAL PE=2 SV=1)

HSP 1 Score: 128.257 bits (321), Expect = 1.027e-28
Identity = 72/112 (64.29%), Postives = 79/112 (70.54%), Query Frame = 2
Query:  371 ACSECVMESMHTGTDSYGVTTGFGVSSRRREEIRSALHKELIRLLNAGTFGNGI*SSHTLLHSAPMAAVLVRVITLLQG*SGIRFEILYPIP*CSITNCPPCLPLLGTIAAS 706
            A S+ VM+SM+ GTDSYGVTTGFG +S RR +   AL KELIR LNAG FGN   S HTL HSA  AA+LVR+ TLLQG SGIRFEIL  I      N  PCLPL GTI AS
Sbjct:   82 ASSDWVMDSMNKGTDSYGVTTGFGATSHRRTKQGGALQKELIRFLNAGIFGNATESCHTLPHSATRAAMLVRINTLLQGYSGIRFEILEAITKLLNHNITPCLPLRGTITAS 193          
BLAST of DY258679 vs. ExPASy Swiss-Prot
Match: PAL1_PEA (Phenylalanine ammonia-lyase 1 OS=Pisum sativum GN=PAL1 PE=2 SV=1)

HSP 1 Score: 127.872 bits (320), Expect = 1.342e-28
Identity = 86/159 (54.09%), Postives = 95/159 (59.75%), Query Frame = 2
Query:  371 ACSECVMESMHTGTDSYGVTTGFGVSSRRREEIRSALHKELIRLLNAGTFGNGI*SSHTLLHSAPMAAVLVRVITLLQG*SGIRFEILYPIP*CSITNCPPCLPLLGTIAASWLSGRAFFFARTLNGTDPFSGLPGLMKRIFGVH*TFQPVGIS-GFSE 844
            A S+ VMESM+ GTDSYGVTTGFG +S RR +   AL KELIR LNAG FGNG  SSHTL H+A  AA+LVR+ TLLQG SGIRFEIL  I      N  PCL L GTI AS       + A  L G  P S   G    I      FQ   I+ GF E
Sbjct:  100 ASSDWVMESMNKGTDSYGVTTGFGATSHRRTKQGGALQKELIRFLNAGIFGNGTESSHTLPHTATRAAMLVRINTLLQGYSGIRFEILEAITKLINNNVTPCL-LRGTITASGDLVPLSYIAGLLTGR-PNSKAHGTSGEILNAKEAFQSAEINDGFFE 256          
BLAST of DY258679 vs. ExPASy Swiss-Prot
Match: PAL2_PHAVU (Phenylalanine ammonia-lyase class 2 OS=Phaseolus vulgaris PE=3 SV=1)

HSP 1 Score: 127.102 bits (318), Expect = 2.289e-28
Identity = 72/112 (64.29%), Postives = 79/112 (70.54%), Query Frame = 2
Query:  371 ACSECVMESMHTGTDSYGVTTGFGVSSRRREEIRSALHKELIRLLNAGTFGNGI*SSHTLLHSAPMAAVLVRVITLLQG*SGIRFEILYPIP*CSITNCPPCLPLLGTIAAS 706
            A S+ VMESM  GTDSYG+TTGFG +S RR +   AL KELIR LNAG FGNG  S+ TL H+A  AA+LVRV TLLQG SGIRFEIL  I      N  PCLPL GTI AS
Sbjct:   88 AISDWVMESMDKGTDSYGITTGFGATSHRRTKQGGALQKELIRFLNAGIFGNGTESNCTLPHTATRAAMLVRVNTLLQGYSGIRFEILEAITKLLNNNITPCLPLRGTITAS 199          
BLAST of DY258679 vs. ExPASy Swiss-Prot
Match: PAL1_SOLTU (Phenylalanine ammonia-lyase 1 OS=Solanum tuberosum GN=PAL-1 PE=3 SV=1)

HSP 1 Score: 127.102 bits (318), Expect = 2.289e-28
Identity = 70/112 (62.50%), Postives = 80/112 (71.43%), Query Frame = 2
Query:  371 ACSECVMESMHTGTDSYGVTTGFGVSSRRREEIRSALHKELIRLLNAGTFGNGI*SSHTLLHSAPMAAVLVRVITLLQG*SGIRFEILYPIP*CSITNCPPCLPLLGTIAAS 706
            A S+ VM+SM  GTDSYGVTTGF  +S RR +   AL KELI+ LNAG FGNG  S+HTL HSA  AA+LVR+ TLLQG SGIRFEIL  I     +N  PCLPL GT+ AS
Sbjct:   96 ASSDWVMDSMSKGTDSYGVTTGFCATSHRRTKNGGALQKELIKFLNAGVFGNGTESTHTLPHSATRAAMLVRINTLLQGYSGIRFEILEAITKLINSNITPCLPLRGTVTAS 207          
BLAST of DY258679 vs. ExPASy Swiss-Prot
Match: PALY_STYHU (Phenylalanine ammonia-lyase OS=Stylosanthes humilis GN=PAL17.1 PE=2 SV=1)

HSP 1 Score: 126.331 bits (316), Expect = 3.904e-28
Identity = 80/153 (52.29%), Postives = 91/153 (59.48%), Query Frame = 2
Query:  371 ACSECVMESMHTGTDSYGVTTGFGVSSRRREEIRSALHKELIRLLNAGTFGNGI*SSHTLLHSAPMAAVLVRVITLLQG*SGIRFEILYPIP*CSITNCPPCLPLLGTIAASWLSGRAFFFARTLNGTDPFSGLPGLMKRIFGVH*TFQPVGI 829
            A S+ VM+SM+ GTDSYGVTTGFG +S RR +   AL KELIR LNAG FGNG  ++ TL H+A  AA+LVR+ TLLQG SGIRFEIL  I      N  PCLPL GTI AS       + A  L G  P S   G           FQ  GI
Sbjct:   91 ASSDWVMDSMNNGTDSYGVTTGFGATSHRRTKQGGALQKELIRFLNAGIFGNGTETNCTLPHTATRAAMLVRINTLLQGYSGIRFEILEAITKLLNNNITPCLPLRGTITASGDLVPLSYIAGLLTGR-PNSKAVGPNGETLNAKEAFQAAGI 242          
BLAST of DY258679 vs. ExPASy Swiss-Prot
Match: PAL3_TOBAC (Phenylalanine ammonia-lyase OS=Nicotiana tabacum PE=2 SV=1)

HSP 1 Score: 126.331 bits (316), Expect = 3.904e-28
Identity = 83/159 (52.20%), Postives = 92/159 (57.86%), Query Frame = 2
Query:  371 ACSECVMESMHTGTDSYGVTTGFGVSSRRREEIRSALHKELIRLLNAGTFGNGI*SSHTLLHSAPMAAVLVRVITLLQG*SGIRFEILYPIP*CSITNCPPCLPLLGTIAASWLSGRAFFFARTLNGTDPFSGLPGLMKRIFGVH*TFQPVGI-SGFSE 844
            A S+ VM+SM  GTDSYGVTTGFG +S RR +   AL KELIR LNAG FGNG  S HTL  S   AA+LVR+ TLLQG SGIRFEIL  I      N  PCLPL GTI AS       + A  L G  P S   G           F+  G+ SGF E
Sbjct:   88 ASSDWVMDSMSKGTDSYGVTTGFGATSHRRTKNGGALQKELIRFLNAGVFGNGTESCHTLPQSGTRAAMLVRINTLLQGYSGIRFEILEAITKLLNHNVTPCLPLRGTITASGDLVPLSYIAGLLTGR-PNSKAIGPNGETLNAEEAFRVAGVNSGFFE 245          
BLAST of DY258679 vs. ExPASy Swiss-Prot
Match: PAL2_TOBAC (Phenylalanine ammonia-lyase OS=Nicotiana tabacum GN=PALA PE=2 SV=2)

HSP 1 Score: 126.331 bits (316), Expect = 3.904e-28
Identity = 80/155 (51.61%), Postives = 90/155 (58.06%), Query Frame = 2
Query:  371 ACSECVMESMHTGTDSYGVTTGFGVSSRRREEIRSALHKELIRLLNAGTFGNGI*SSHTLLHSAPMAAVLVRVITLLQG*SGIRFEILYPIP*CSITNCPPCLPLLGTIAASWLSGRAFFFARTLNGTDPFSGLPGLMKRIFGVH*TFQPVGISG 835
            A S+ VM+SM  GTDSYGVTTGFG +S RR +   AL KELIR LNAG FGNG  S HTL  S   AA+LVR+ TLLQG SGIRFEIL  I      N  PCLPL GTI AS       + A  L G  P S   G           F+  G++G
Sbjct:   88 ASSDWVMDSMGKGTDSYGVTTGFGATSHRRTKNGGALQKELIRFLNAGVFGNGTESCHTLPQSGTRAAMLVRINTLLQGYSGIRFEILEAITKLLNHNVTPCLPLRGTITASGDLVPLSYIAGLLTGR-PNSKAVGPNGETLNAEEAFRVAGVNG 241          
BLAST of DY258679 vs. ExPASy Swiss-Prot
Match: PAL2_PETCR (Phenylalanine ammonia-lyase 2 OS=Petroselinum crispum GN=PAL2 PE=2 SV=1)

HSP 1 Score: 125.946 bits (315), Expect = 5.099e-28
Identity = 82/155 (52.90%), Postives = 93/155 (60.00%), Query Frame = 2
Query:  371 ACSECVMESMHTGTDSYGVTTGFGVSSRRREEIRSALHKELIRLLNAGTFGNGI*SSHTLLHSAPMAAVLVRVITLLQG*SGIRFEILYPIP*CSITNCPPCLPLLGTIAASWLSGRAFFFARTLNGTDPFSGLPGLMKRIFGVH*TFQPVGISG 835
            A S+ VM+SM+ GTDSYGVTTGFG +S RR +   AL KELIR LNAG FGNG  S +TL HSA  AA+LVR+ TLLQG SGIRFEIL  I      N  PCLPL GTI AS       + A  L G  P S   G    I      F+  G+ G
Sbjct:   94 ASSDWVMDSMNKGTDSYGVTTGFGATSHRRTKQGGALQKELIRFLNAGIFGNG--SDNTLPHSATRAAMLVRINTLLQGYSGIRFEILEAITKFLNQNITPCLPLRGTITASGDLVPLSYIAGLLTGR-PNSKAVGPTGVILSPEEAFKLAGVEG 245          
The following BLAST results are available for this feature:
BLAST of DY258679 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 44
Match NameE-valueIdentityDescription
PAL1_SOYBN3.531e-2965.18Phenylalanine ammonia-lyase 1 OS=Glycine max GN=PA... [more]
PALY_CAMSI6.023e-2965.18Phenylalanine ammonia-lyase OS=Camellia sinensis G... [more]
PAL1_IPOBA1.027e-2864.29Phenylalanine ammonia-lyase OS=Ipomoea batatas GN=... [more]
PAL1_PEA1.342e-2854.09Phenylalanine ammonia-lyase 1 OS=Pisum sativum GN=... [more]
PAL2_PHAVU2.289e-2864.29Phenylalanine ammonia-lyase class 2 OS=Phaseolus v... [more]
PAL1_SOLTU2.289e-2862.50Phenylalanine ammonia-lyase 1 OS=Solanum tuberosum... [more]
PALY_STYHU3.904e-2852.29Phenylalanine ammonia-lyase OS=Stylosanthes humili... [more]
PAL3_TOBAC3.904e-2852.20Phenylalanine ammonia-lyase OS=Nicotiana tabacum P... [more]
PAL2_TOBAC3.904e-2851.61Phenylalanine ammonia-lyase OS=Nicotiana tabacum G... [more]
PAL2_PETCR5.099e-2852.90Phenylalanine ammonia-lyase 2 OS=Petroselinum cris... [more]

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Properties
Property NameValue
Genbank descriptionKN0AAI3AA06FM1 AbsDev1 Citrus clementina cDNA 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DY258679 ID=DY258679; Name=DY258679; organism=Citrus clementina; type=EST; length=1307bp
GTTAAGCTATCTTTTTACGGCTAGGAATATGACAGTAGGTTGAACTGGCA
GTTGCCACTTGCGGCTGTTACTGCCGCTGCTGTGGTTTGTGTTTGCTATG
CTAGGTGCTGGTGATTGCACGCTGCCCCTGTAGAGAGCGTGCAGATAATA
TTGATGAGGTGACTGCTCTACCTTAGACTACGAATATGTGATAGACTTTC
TATTTTGATTGAGAGGATTTATGTCTTTGCTTGGCTCTATTTTTGACCCC
TTTTATGGATTGGGGGGTCTGACGATGAGTTGAAAGCTGTAACATTTGGA
CGCTGACTGCTCTTGTTTCTTCCGCTACCAATGCGAGATCTATCTATATT
CTCTTCTTTAGAGCGGCTGCGCCTGCAGTGAATGCGTGATGGAGAGCATG
CATACTGGCACGGACAGTTACGGCGTTACCACTGGGTTTGGTGTCTCTTC
TCGTCGCAGAGAAGAGATCCGTAGTGCTCTTCATAAAGAGCTTATTAGAC
TTTTGAACGCTGGAACCTTTGGAAACGGAATATAGTCGTCTCACACGCTA
CTTCACTCAGCACCGATGGCTGCCGTGCTTGTGAGGGTTATCACTCTTCT
CCAGGGCTAATCCGGCATCCGATTTGAAATCCTGTACCCGATCCCATGAT
GCTCAATCACCAACTGCCCTCCATGTCTCCCTCTTCTCGGTACAATCGCT
GCTTCTTGGTTATCGGGACGCGCTTTCTTCTTTGCCCGGACGCTCAACGG
GACGGACCCCTTCTCAGGCCTCCCCGGTCTCATGAAAAGAATCTTTGGGG
TCCATTAGACCTTTCAACCCGTCGGGATTTCAGGTTTTTCGGAGGGGGGG
GTCCTCAGGGGGGGGCCTGCCCCTTGGCAATAGAAAAGGCATTTGAATTT
ATTGGTCCTTTCTCTCCTTCTGCTTCTGTTCTCAGGGCCTCACCCTTTGT
CCATCTGATATCTAAAAAATTTTCCCAGCTCTTTGTTCTGCGGGAGGCCT
AGCTGAACGGCATCCTCTATTTCTCCCTCCTCTCCCTTCGCCCCCCCTCT
TCTCACTGGCCCCGTCTTTTCGGCCCCGCTTTTATGGGGCCGGCTGCCGC
GATACGCGGTCAACCATTCCCCCCCCGCCTTTTCCCTCCTTTTTATTCCT
CTTCCCCTCCTTGCTTTCAAGAAACTTTTCTTTGTCCTTTTATTCGCTGT
ACACACCAACTTCTCTCTTCTTCCCTCCCCACACACAACGCTCCGCGGCG
CCCCCGCTCTCCCGCCTCGCCCCCTCCCCCCCTCAAACAAACATGTTATC
CTCACCA
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