DY258681
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of DY258681 vs. ExPASy Swiss-Prot
Match: SPEE_SODGM (Spermidine synthase OS=Sodalis glossinidius (strain morsitans) GN=speE PE=3 SV=1) HSP 1 Score: 97.0561 bits (240), Expect = 2.472e-19 Identity = 45/102 (44.12%), Postives = 69/102 (67.65%), Query Frame = 3 Query: 321 VEKILFQGKSDYQNVMVFQSSTYGKVLILDGVIQLTERDECAYQEMITHLPLCSIPNPKNVLVIGGGDGEVLREISRHSSVEKNDIQEIDKMAFKVPKQFFP 626 V+ +L++ + Q++++F+++ G+V+ LDGV+Q TERDE Y EM+ H+PL + K VL+IGGGDG +LRE+SRH VE+ + EID KQ+ P Sbjct: 21 VDNLLYRDTTGQQDLVIFENAALGRVMALDGVVQTTERDEFIYHEMMAHVPLIAHGGAKKVLIIGGGDGGMLREVSRHPGVEQITMVEIDAGVVTFCKQYLP 122
BLAST of DY258681 vs. ExPASy Swiss-Prot
Match: SPEE_HALHL (Spermidine synthase OS=Halorhodospira halophila (strain DSM 244 / SL1) GN=speE PE=3 SV=1) HSP 1 Score: 96.2857 bits (238), Expect = 4.217e-19 Identity = 47/122 (38.52%), Postives = 77/122 (63.11%), Query Frame = 3 Query: 267 GWFSEISPMWPGEAHSLKVEKILFQGKSDYQNVMVFQSSTYGKVLILDGVIQLTERDECAYQEMITHLPLCSIPNPKNVLVIGGGDGEVLREISRHSSVEKNDIQEIDKMAFKVPKQFFPDV 632 GWF+E G A SL +++ + + +S+YQ++ V+++ +G++L+LDG + LTERDE Y EM+ H L + P+ V ++GGGD +LRE+ RH VE E+D+ +V + FPD+ Sbjct: 4 GWFTEAVED-EGVAFSLAIDERVHEEQSEYQHIEVYRTRRWGRLLVLDGCVMLTERDEFLYHEMMAHPALFAHREPRRVAIVGGGDCGILREVLRHPGVEHTLQVELDERVTRVAETHFPDL 124
BLAST of DY258681 vs. ExPASy Swiss-Prot
Match: SPEE_THET8 (Spermidine synthase OS=Thermus thermophilus (strain HB8 / ATCC 27634 / DSM 579) GN=speE PE=1 SV=1) HSP 1 Score: 95.9005 bits (237), Expect = 5.507e-19 Identity = 48/123 (39.02%), Postives = 75/123 (60.98%), Query Frame = 3 Query: 297 PGEAHSLKVEKILFQGKSDYQNVMVFQSSTYGKVLILDGVIQLTERDECAYQEMITHLPLCSIPNPKNVLVIGGGDGEVLREISRHSSVEKNDIQEIDKMAFKVPKQFFPDVPGWLKDPPGDP 665 P E ++E+++ GK+ +Q+ +F+S +GKVLILD +Q TERDE Y E + H + + P PK VL++GGG+G LRE+ +H +VEK + +ID +V K+ P+ W + DP Sbjct: 13 PYETLVRRMERVIASGKTPFQDYFLFESKGFGKVLILDKDVQSTERDEYIYHETLVHPAMLTHPEPKRVLIVGGGEGATLREVLKHPTVEKAVMVDIDGELVEVAKRHMPE---WHQGAFDDP 132
BLAST of DY258681 vs. ExPASy Swiss-Prot
Match: SPEE_THET2 (Spermidine synthase OS=Thermus thermophilus (strain HB27 / ATCC BAA-163 / DSM 7039) GN=speE PE=3 SV=1) HSP 1 Score: 95.9005 bits (237), Expect = 5.507e-19 Identity = 48/123 (39.02%), Postives = 75/123 (60.98%), Query Frame = 3 Query: 297 PGEAHSLKVEKILFQGKSDYQNVMVFQSSTYGKVLILDGVIQLTERDECAYQEMITHLPLCSIPNPKNVLVIGGGDGEVLREISRHSSVEKNDIQEIDKMAFKVPKQFFPDVPGWLKDPPGDP 665 P E ++E+++ GK+ +Q+ +F+S +GKVLILD +Q TERDE Y E + H + + P PK VL++GGG+G LRE+ +H +VEK + +ID +V K+ P+ W + DP Sbjct: 13 PYETLVRRMERVIASGKTPFQDYFLFESKGFGKVLILDKDVQSTERDEYIYHETLVHPAMLTHPEPKRVLIVGGGEGATLREVLKHPTVEKAVMVDIDGELVEVAKRHMPE---WHQGAFDDP 132
BLAST of DY258681 vs. ExPASy Swiss-Prot
Match: SPEE_SULAC (Probable spermidine synthase OS=Sulfolobus acidocaldarius GN=speE PE=3 SV=1) HSP 1 Score: 90.1225 bits (222), Expect = 2.689e-18 Identity = 44/116 (37.93%), Postives = 70/116 (60.34%), Query Frame = 3 Query: 270 WFSEISPMWPGEAHSLKVEKILFQGKSDYQNVMVFQSSTYGKVLILDGVIQLTERDECAYQEMITHLPLCSIPNPKNVLVIGGGDGEVLREISRHSSVEKNDIQEIDKMAFKVPKQ 617 W + P E H+ +++IL + +S++Q V++ + +GK LI+DG IQ T DE Y E + H L S+ +P+N+L++GGG+G LRE R+ SV K + +ID + K KQ Sbjct: 4 WTWHLEWQTPQEFHAHAIKRILIEERSEFQRVILAELFRFGKALIIDGKIQSTLADEFIYHESLVHPLLISLEDPENILILGGGEGATLREALRYKSVRKVTMVDIDPVVIKFAKQ 119 HSP 2 Score: 22.7126 bits (47), Expect = 2.689e-18 Identity = 10/18 (55.56%), Postives = 11/18 (61.11%), Query Frame = 1 Query: 655 RVTLHIGDGFAFVKAGRE 708 R L IGDG+ FVK E Sbjct: 133 RTNLIIGDGYKFVKETNE 150
BLAST of DY258681 vs. ExPASy Swiss-Prot
Match: SPEE_PYRKO (Probable spermidine synthase OS=Pyrococcus kodakaraensis GN=speE PE=3 SV=1) HSP 1 Score: 93.5893 bits (231), Expect = 2.733e-18 Identity = 43/98 (43.88%), Postives = 68/98 (69.39%), Query Frame = 3 Query: 300 GEAHSLKVEKILFQGKSDYQNVMVFQSSTYGKVLILDGVIQLTERDECAYQEMITHLPLCSIPNPKNVLVIGGGDGEVLREISRHSSVEKNDIQEIDK 593 G KV++ LF+ +++YQ + ++++ +GK+L+LDG +QL E E +Y E++ H + + PNP+ VLVIGGGDG LRE+ RH +VEK + EID+ Sbjct: 17 GYGVGFKVKRRLFETQTEYQRLEIYETEGFGKLLVLDGTVQLVEVGEESYHEVLVHPVMLAHPNPRKVLVIGGGDGGTLREVLRHDTVEKAIMVEIDE 114
BLAST of DY258681 vs. ExPASy Swiss-Prot
Match: SPEE_METCA (Spermidine synthase OS=Methylococcus capsulatus GN=speE PE=3 SV=1) HSP 1 Score: 93.2041 bits (230), Expect = 3.570e-18 Identity = 48/132 (36.36%), Postives = 81/132 (61.36%), Query Frame = 3 Query: 270 WFSEISPMWPGEAHSLKVEKILFQGKSDYQNVMVFQSSTYGKVLILDGVIQLTERDECAYQEMITHLPLCSIPNPKNVLVIGGGDGEVLREISRHSSVEKNDIQEIDKMAFKVPKQFFPDVPGWLKDPPGDP 665 WF+E P G A SLK+ L + ++ +Q + ++ + ++GK++++DG +++RD Y EM+TH L + P PK V +IGGGD LRE+ +HS VEK +ID+ ++ +++FP+ L + GDP Sbjct: 7 WFTESYPD-NGSALSLKIRAKLHEEQTPFQRIEIYDTESFGKLMVIDGCTMVSDRDNFLYHEMMTHPVLYTHPAPKTVWIIGGGDCGSLREVLKHSEVEKAVQIDIDERVTRLAERYFPE----LCEANGDP 133
BLAST of DY258681 vs. ExPASy Swiss-Prot
Match: SPEE_PROMS (Spermidine synthase OS=Prochlorococcus marinus (strain AS9601) GN=speE PE=3 SV=1) HSP 1 Score: 91.2781 bits (225), Expect = 1.356e-17 Identity = 44/104 (42.31%), Postives = 64/104 (61.54%), Query Frame = 3 Query: 327 KILFQGKSDYQNVMVFQSSTYGKVLILDGVIQLTERDECAYQEMITHLPLCSIPNPKNVLVIGGGDGEVLREISRHSSVEKNDIQEIDKMAFKVPKQFFPDVPG 638 KILF+ S YQ ++V ++ YGK L+LDG + +DE Y E + H L SI NVL+IGGGDG +RE ++S + K D+ EID+ K+ K+F ++ G Sbjct: 22 KILFKKTSKYQEIIVIENEYYGKALMLDGCWMTSLKDEKYYHECLVHPALSSIDEKSNVLIIGGGDGGTVRECVKYSKISKIDLVEIDEEVIKISKKFLKEIAG 125
BLAST of DY258681 vs. ExPASy Swiss-Prot
Match: SPEE_ALHEH (Spermidine synthase OS=Alkalilimnicola ehrlichei (strain MLHE-1) GN=speE PE=3 SV=1) HSP 1 Score: 91.2781 bits (225), Expect = 1.356e-17 Identity = 43/128 (33.59%), Postives = 79/128 (61.72%), Query Frame = 3 Query: 270 WFSEISPMWPGEAHSLKVEKILFQGKSDYQNVMVFQSSTYGKVLILDGVIQLTERDECAYQEMITHLPLCSIPNPKNVLVIGGGDGEVLREISRHSSVEKNDIQEIDKMAFKVPKQFFPDVPGWLKDP 653 WF+E+ G A SL+V + L + ++ +Q++ V+++ +G++L++DG + LT RD Y EM++H L + P+P+ V +IGGGD +LRE+ +H +E +ID + +++FP++ DP Sbjct: 7 WFTEVLEE-EGMAFSLRVREKLHEERTAFQHIEVYETEAWGRLLVIDGCVMLTSRDNFVYHEMMSHPALFTHPDPRRVAIIGGGDCGMLREVLKHPGIESVVQVDIDAGVTRAAERYFPELTEANDDP 133
BLAST of DY258681 vs. ExPASy Swiss-Prot
Match: SPEE_THISH (Spermidine synthase OS=Thioalkalivibrio sp. (strain HL-EbGR7) GN=speE PE=3 SV=1) HSP 1 Score: 90.8929 bits (224), Expect = 1.772e-17 Identity = 43/128 (33.59%), Postives = 80/128 (62.50%), Query Frame = 3 Query: 270 WFSEISPMWPGEAHSLKVEKILFQGKSDYQNVMVFQSSTYGKVLILDGVIQLTERDECAYQEMITHLPLCSIPNPKNVLVIGGGDGEVLREISRHSSVEKNDIQEIDKMAFKVPKQFFPDVPGWLKDP 653 WF+EI A SL++++ L + ++ +Q + ++++ +G ++++DG + LT+RD Y EM++H L S +PKNVL+IGGGD LRE+ +H V+ +ID+ ++ +++FP++ DP Sbjct: 7 WFTEIHQ---DTAFSLRMKEKLHEEQTPFQKIEIYETEGFGTLMVIDGCVMLTDRDNFIYHEMMSHPVLYSHSDPKNVLIIGGGDCGTLREVLKHPEVKSATQVDIDERVTRLAEKYFPELCDSNDDP 131 The following BLAST results are available for this feature:
BLAST of DY258681 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 203
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Sequences
The
following sequences are available for this feature:
EST sequence >DY258681 ID=DY258681; Name=DY258681; organism=Citrus clementina; type=EST; length=1283bpback to top |