DY258681
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of DY258681 vs. ExPASy Swiss-Prot
Match: SPEE_AERPE (Probable spermidine synthase OS=Aeropyrum pernix GN=speE PE=3 SV=2) HSP 1 Score: 88.1965 bits (217), Expect = 1.148e-16 Identity = 48/132 (36.36%), Postives = 74/132 (56.06%), Query Frame = 3 Query: 270 WFSEISPMWPGEAHSLKVEKILFQGKSDYQNVMVFQSSTYGKVLILDGVIQLTERDECAYQEMITHLPLCSIPNPKNVLVIGGGDGEVLREISRHSSVEKNDIQEIDKMAFKVPKQFFPDVPGWLKDPPGDP 665 WF E + P A +E ++FQG+S +Q + V + S GKVL+LDG Q +E DE Y E + H + +P+ VL++GGG+G LRE+ +H SVEK + +ID+ V ++ + W + DP Sbjct: 15 WFLEW--LTPDRATLKHIEDVIFQGRSRFQEIAVVRVSGEGKVLVLDGKTQSSESDEFMYHEALVHPAMILHGSPRKVLILGGGEGATLREVLKHRSVEKAVMVDIDETVVNVAREHLRE---WHRGAFDDP 141
BLAST of DY258681 vs. ExPASy Swiss-Prot
Match: SPEE_XANC5 (Spermidine synthase OS=Xanthomonas campestris pv. vesicatoria (strain 85-10) GN=speE PE=3 SV=1) HSP 1 Score: 87.4261 bits (215), Expect = 1.959e-16 Identity = 39/111 (35.14%), Postives = 70/111 (63.06%), Query Frame = 3 Query: 300 GEAHSLKVEKILFQGKSDYQNVMVFQSSTYGKVLILDGVIQLTERDECAYQEMITHLPLCSIPNPKNVLVIGGGDGEVLREISRHSSVEKNDIQEIDKMAFKVPKQFFPDV 632 G A ++ L + +S +Q + ++Q++ +GK++++DG + LT RD Y EMI+H L + P PK V++IGGGD LRE+ +H VE +ID+ ++ +++FP++ Sbjct: 16 GSAIGFRISGKLDEVQSPFQKIEIYQTTDWGKLMLIDGAVMLTSRDNFFYHEMISHPALFTHPAPKRVVIIGGGDCGTLREVLKHPGVESATQCDIDEQVTRMSEKYFPEL 126
BLAST of DY258681 vs. ExPASy Swiss-Prot
Match: SPEE_XANAC (Spermidine synthase OS=Xanthomonas axonopodis pv. citri GN=speE PE=3 SV=1) HSP 1 Score: 87.4261 bits (215), Expect = 1.959e-16 Identity = 39/111 (35.14%), Postives = 70/111 (63.06%), Query Frame = 3 Query: 300 GEAHSLKVEKILFQGKSDYQNVMVFQSSTYGKVLILDGVIQLTERDECAYQEMITHLPLCSIPNPKNVLVIGGGDGEVLREISRHSSVEKNDIQEIDKMAFKVPKQFFPDV 632 G A ++ L + +S +Q + ++Q++ +GK++++DG + LT RD Y EMI+H L + P PK V++IGGGD LRE+ +H VE +ID+ ++ +++FP++ Sbjct: 16 GSAIGFRISGKLDEVQSPFQKIEIYQTTDWGKLMLIDGAVMLTSRDNFFYHEMISHPALFTHPAPKRVVIIGGGDCGTLREVLKHPGVESATQCDIDEQVTRMSEKYFPEL 126
BLAST of DY258681 vs. ExPASy Swiss-Prot
Match: SPEE_SULSO (Probable spermidine synthase OS=Sulfolobus solfataricus GN=speE PE=3 SV=1) HSP 1 Score: 87.4261 bits (215), Expect = 1.959e-16 Identity = 45/119 (37.82%), Postives = 73/119 (61.34%), Query Frame = 3 Query: 267 GWFSEISPMWPGEAHSLKVEKILFQGKSDYQNVMVFQSSTYGKVLILDGVIQLTERDECAYQEMITHLPLCSIPN-PKNVLVIGGGDGEVLREISRHSSVEKNDIQEIDKMAFKVPKQF 620 GW + P E H +EK+L + K+ YQ+V + + + +GK LI+DG +Q T DE Y E++ H L S+ PK+VL++GGG+G LRE+ ++ SVEK + +ID+ + K++ Sbjct: 3 GWHWLLEWQTPYEFHGHLIEKVLAEEKTPYQHVTLVEFTRFGKGLIIDGKVQSTLYDEHIYHELLVHPLLLSLTKPPKSVLILGGGEGATLREVLKYKSVEKAVMVDIDEKVIEFAKKY 121
BLAST of DY258681 vs. ExPASy Swiss-Prot
Match: SPEE_XANOR (Spermidine synthase OS=Xanthomonas oryzae pv. oryzae GN=speE PE=3 SV=1) HSP 1 Score: 87.0409 bits (214), Expect = 2.558e-16 Identity = 39/111 (35.14%), Postives = 70/111 (63.06%), Query Frame = 3 Query: 300 GEAHSLKVEKILFQGKSDYQNVMVFQSSTYGKVLILDGVIQLTERDECAYQEMITHLPLCSIPNPKNVLVIGGGDGEVLREISRHSSVEKNDIQEIDKMAFKVPKQFFPDV 632 G A ++ L + +S +Q + ++Q++ +GK++++DG + LT RD Y EMI+H L + P PK V++IGGGD LRE+ +H VE +ID+ ++ +++FP++ Sbjct: 16 GSAIGFRISGKLDEVQSLFQKIEIYQTTDWGKLMLIDGAVMLTSRDNFFYHEMISHPALFTHPTPKRVVIIGGGDCGTLREVLKHPGVESATQCDIDEQVTRMSEKYFPEL 126
BLAST of DY258681 vs. ExPASy Swiss-Prot
Match: SPEE_XANOP (Spermidine synthase OS=Xanthomonas oryzae pv. oryzae (strain PXO99A) GN=speE PE=3 SV=1) HSP 1 Score: 87.0409 bits (214), Expect = 2.558e-16 Identity = 39/111 (35.14%), Postives = 70/111 (63.06%), Query Frame = 3 Query: 300 GEAHSLKVEKILFQGKSDYQNVMVFQSSTYGKVLILDGVIQLTERDECAYQEMITHLPLCSIPNPKNVLVIGGGDGEVLREISRHSSVEKNDIQEIDKMAFKVPKQFFPDV 632 G A ++ L + +S +Q + ++Q++ +GK++++DG + LT RD Y EMI+H L + P PK V++IGGGD LRE+ +H VE +ID+ ++ +++FP++ Sbjct: 16 GSAIGFRISGKLDEVQSLFQKIEIYQTTDWGKLMLIDGAVMLTSRDNFFYHEMISHPALFTHPTPKRVVIIGGGDCGTLREVLKHPGVESATQCDIDEQVTRMSEKYFPEL 126
BLAST of DY258681 vs. ExPASy Swiss-Prot
Match: SPEE_XANOM (Spermidine synthase OS=Xanthomonas oryzae pv. oryzae (strain MAFF 311018) GN=speE PE=3 SV=1) HSP 1 Score: 87.0409 bits (214), Expect = 2.558e-16 Identity = 39/111 (35.14%), Postives = 70/111 (63.06%), Query Frame = 3 Query: 300 GEAHSLKVEKILFQGKSDYQNVMVFQSSTYGKVLILDGVIQLTERDECAYQEMITHLPLCSIPNPKNVLVIGGGDGEVLREISRHSSVEKNDIQEIDKMAFKVPKQFFPDV 632 G A ++ L + +S +Q + ++Q++ +GK++++DG + LT RD Y EMI+H L + P PK V++IGGGD LRE+ +H VE +ID+ ++ +++FP++ Sbjct: 16 GSAIGFRISGKLDEVQSLFQKIEIYQTTDWGKLMLIDGAVMLTSRDNFFYHEMISHPALFTHPTPKRVVIIGGGDCGTLREVLKHPGVESATQCDIDEQVTRMSEKYFPEL 126
BLAST of DY258681 vs. ExPASy Swiss-Prot
Match: SPEE_PROMP (Spermidine synthase OS=Prochlorococcus marinus subsp. pastoris (strain CCMP1986 / MED4) GN=speE PE=3 SV=1) HSP 1 Score: 87.0409 bits (214), Expect = 2.558e-16 Identity = 42/104 (40.38%), Postives = 61/104 (58.65%), Query Frame = 3 Query: 327 KILFQGKSDYQNVMVFQSSTYGKVLILDGVIQLTERDECAYQEMITHLPLCSIPNPKNVLVIGGGDGEVLREISRHSSVEKNDIQEIDKMAFKVPKQFFPDVPG 638 K+L + S YQ +++ ++ YGK L+LDG + RDE Y E + H L SI ++L+IGGGDG RE ++S V K D+ EID+ KV K F ++ G Sbjct: 22 KVLLKKNSKYQEILIIETDFYGKALMLDGCWMTSVRDEKYYHECLVHPALSSIDKKSHILIIGGGDGGTARECLKYSQVSKIDLVEIDEEVIKVSKTFLKEIGG 125
BLAST of DY258681 vs. ExPASy Swiss-Prot
Match: SPEE_PROM2 (Spermidine synthase OS=Prochlorococcus marinus (strain MIT 9215) GN=speE PE=3 SV=1) HSP 1 Score: 87.0409 bits (214), Expect = 2.558e-16 Identity = 41/104 (39.42%), Postives = 63/104 (60.58%), Query Frame = 3 Query: 327 KILFQGKSDYQNVMVFQSSTYGKVLILDGVIQLTERDECAYQEMITHLPLCSIPNPKNVLVIGGGDGEVLREISRHSSVEKNDIQEIDKMAFKVPKQFFPDVPG 638 KIL + S YQ +++ ++ YGK L+LDG + +DE Y E + H L SI N+L+IGGGDG +RE ++S + K D+ EID+ K+ K+F ++ G Sbjct: 22 KILIKKTSKYQEIILIENEYYGKALMLDGCWMTSLKDEKYYHECLVHPALSSIEEKSNILIIGGGDGGTVRECVKYSQISKIDLVEIDEEVIKISKKFLKEIGG 125
BLAST of DY258681 vs. ExPASy Swiss-Prot
Match: SPEE_PROM0 (Spermidine synthase OS=Prochlorococcus marinus (strain MIT 9301) GN=speE PE=3 SV=1) HSP 1 Score: 86.6557 bits (213), Expect = 3.341e-16 Identity = 40/103 (38.83%), Postives = 63/103 (61.17%), Query Frame = 3 Query: 330 ILFQGKSDYQNVMVFQSSTYGKVLILDGVIQLTERDECAYQEMITHLPLCSIPNPKNVLVIGGGDGEVLREISRHSSVEKNDIQEIDKMAFKVPKQFFPDVPG 638 +L + KS YQ ++V ++ YG+ L+LDG + +DE Y E + H L SI NVL+IGGGDG +RE +++ + K D+ EID+ K+ K+F ++ G Sbjct: 23 VLIKQKSQYQEIIVIENEYYGRALMLDGCWMTSLKDEKYYHECLVHPALSSIDEKSNVLIIGGGDGGTVRECVKYAQISKIDLVEIDEEVIKISKKFLKEIGG 125 The following BLAST results are available for this feature:
BLAST of DY258681 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 203
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Sequences
The
following sequences are available for this feature:
EST sequence >DY258681 ID=DY258681; Name=DY258681; organism=Citrus clementina; type=EST; length=1283bpback to top |